BLASTX nr result

ID: Cephaelis21_contig00010467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010467
         (1563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t...    83   2e-13
ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyr...    82   3e-13
ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|1...    81   9e-13
ref|XP_004158797.1| PREDICTED: probable serine incorporator-like...    80   1e-12
ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vit...    80   1e-12

>ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana]
           gi|334182610|ref|NP_001185008.1| serinc-domain
           containing protein [Arabidopsis thaliana]
           gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity
           to gb|AF181686 membrane protein TMS1d from Drosophila
           melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674
           come from this gene [Arabidopsis thaliana]
           gi|332191295|gb|AEE29416.1| serinc-domain containing
           protein [Arabidopsis thaliana]
           gi|332191296|gb|AEE29417.1| serinc-domain containing
           protein [Arabidopsis thaliana]
          Length = 412

 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 39/57 (68%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSP 173
           G ASEPRDYECNGLH+  + VST T+T+GLL  +LSVVY A+ AGSST+L  PPDSP
Sbjct: 259 GLASEPRDYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSP 315


>ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335994|gb|EFH66411.1| TMS membrane family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 412

 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 39/57 (68%), Positives = 45/57 (78%)
 Frame = +3

Query: 3   GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSP 173
           G ASEPRDYECNGLH   + VST T+T+GLL  +LSVVY A+ AGSST+L  PPDSP
Sbjct: 259 GLASEPRDYECNGLHKHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSP 315


>ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|118488403|gb|ABK96018.1|
           unknown [Populus trichocarpa]
           gi|222844951|gb|EEE82498.1| predicted protein [Populus
           trichocarpa]
          Length = 414

 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = +3

Query: 3   GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSPLVG 182
           G +SEPR+YECNGLH   + VSTSTLT+GLL  +LSVVY A+ AGSST+L  PP SP  G
Sbjct: 259 GLSSEPREYECNGLHRHSKAVSTSTLTIGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRAG 318


>ref|XP_004158797.1| PREDICTED: probable serine incorporator-like [Cucumis sativus]
          Length = 411

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +3

Query: 3   GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSPLVG 182
           G ASEPRDYECNGLH   + VST TL++GLL  +LSVVY A+ AGSST+L  PP SP  G
Sbjct: 259 GLASEPRDYECNGLHKHSKAVSTGTLSLGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRAG 318


>ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vitis vinifera]
           gi|298204750|emb|CBI25248.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = +3

Query: 3   GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSPLVG 182
           G +SEPRDYECNGLH   + VST TLT+GLL  +LSV+Y A+ AGSST+L  PP SP  G
Sbjct: 259 GLSSEPRDYECNGLHKHSKAVSTGTLTLGLLTTILSVIYSAVRAGSSTTLLSPPSSPRAG 318


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