BLASTX nr result
ID: Cephaelis21_contig00010467
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00010467 (1563 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t... 83 2e-13 ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyr... 82 3e-13 ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|1... 81 9e-13 ref|XP_004158797.1| PREDICTED: probable serine incorporator-like... 80 1e-12 ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vit... 80 1e-12 >ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana] gi|334182610|ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674 come from this gene [Arabidopsis thaliana] gi|332191295|gb|AEE29416.1| serinc-domain containing protein [Arabidopsis thaliana] gi|332191296|gb|AEE29417.1| serinc-domain containing protein [Arabidopsis thaliana] Length = 412 Score = 83.2 bits (204), Expect = 2e-13 Identities = 39/57 (68%), Positives = 46/57 (80%) Frame = +3 Query: 3 GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSP 173 G ASEPRDYECNGLH+ + VST T+T+GLL +LSVVY A+ AGSST+L PPDSP Sbjct: 259 GLASEPRDYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSP 315 >ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297335994|gb|EFH66411.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata] Length = 412 Score = 82.4 bits (202), Expect = 3e-13 Identities = 39/57 (68%), Positives = 45/57 (78%) Frame = +3 Query: 3 GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSP 173 G ASEPRDYECNGLH + VST T+T+GLL +LSVVY A+ AGSST+L PPDSP Sbjct: 259 GLASEPRDYECNGLHKHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSP 315 >ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|118488403|gb|ABK96018.1| unknown [Populus trichocarpa] gi|222844951|gb|EEE82498.1| predicted protein [Populus trichocarpa] Length = 414 Score = 80.9 bits (198), Expect = 9e-13 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = +3 Query: 3 GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSPLVG 182 G +SEPR+YECNGLH + VSTSTLT+GLL +LSVVY A+ AGSST+L PP SP G Sbjct: 259 GLSSEPREYECNGLHRHSKAVSTSTLTIGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRAG 318 >ref|XP_004158797.1| PREDICTED: probable serine incorporator-like [Cucumis sativus] Length = 411 Score = 80.1 bits (196), Expect = 1e-12 Identities = 39/60 (65%), Positives = 45/60 (75%) Frame = +3 Query: 3 GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSPLVG 182 G ASEPRDYECNGLH + VST TL++GLL +LSVVY A+ AGSST+L PP SP G Sbjct: 259 GLASEPRDYECNGLHKHSKAVSTGTLSLGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRAG 318 >ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vitis vinifera] gi|298204750|emb|CBI25248.3| unnamed protein product [Vitis vinifera] Length = 413 Score = 80.1 bits (196), Expect = 1e-12 Identities = 38/60 (63%), Positives = 45/60 (75%) Frame = +3 Query: 3 GRASEPRDYECNGLHDILEVVSTSTLTVGLLIAMLSVVYYAIHAGSSTSLFFPPDSPLVG 182 G +SEPRDYECNGLH + VST TLT+GLL +LSV+Y A+ AGSST+L PP SP G Sbjct: 259 GLSSEPRDYECNGLHKHSKAVSTGTLTLGLLTTILSVIYSAVRAGSSTTLLSPPSSPRAG 318