BLASTX nr result
ID: Cephaelis21_contig00010368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00010368
(327 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi... 121 7e-26
ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|2... 113 1e-23
ref|XP_002509440.1| pentatricopeptide repeat-containing protein,... 109 2e-22
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 104 7e-21
ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi... 101 7e-20
>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 121 bits (303), Expect = 7e-26
Identities = 63/109 (57%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 HDQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVA 178
H+QALEL QM G P ++T SSALKACAG+ L++ G +LHS L+KMDM D+FVSV
Sbjct: 340 HEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG 399
Query: 179 LIDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
L+DMYSKC LLE+AR+ ++L+ E+DL A NA+ISGY+Q D + L LF
Sbjct: 400 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLF 448
Score = 69.3 bits (168), Expect = 3e-10
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +2
Query: 5 DQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMD-MLDVFVSVAL 181
++AL+LF +M + +P + SS L ACA L + G +LH +LK +LD+F +L
Sbjct: 543 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSL 602
Query: 182 IDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
++MY+KCG +++A + + E + + +AMI G Q+ R L LF
Sbjct: 603 VNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLF 650
Score = 63.9 bits (154), Expect = 1e-08
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +2
Query: 8 QALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVALI 184
+A+ LF +M + G +P ++ SS + AC GLR G +H L+K+ D F + AL+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 185 DMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLML 322
DMY+K G L +A V++ + + D+ + NA+I+G ++ L L
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL 346
Score = 60.8 bits (146), Expect = 1e-07
Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 11 ALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDML-DVFVSVALID 187
AL F +M +LG + +TFSS LKAC+ ++ + G ++H +++ DVFV+ L+
Sbjct: 141 ALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVV 200
Query: 188 MYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
MY+KC +++ ++D + E ++ + NA+ S Y Q D + + LF
Sbjct: 201 MYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLF 246
Score = 54.7 bits (130), Expect = 8e-06
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +2
Query: 8 QALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVALI 184
+AL LF +M G T S+ LK+ AGL++ ++H L +K D++V +LI
Sbjct: 443 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 502
Query: 185 DMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
D Y KC +E+A +++ DL + +MI+ Y Q + L LF
Sbjct: 503 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 549
>ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|222848084|gb|EEE85631.1|
predicted protein [Populus trichocarpa]
Length = 786
Score = 113 bits (283), Expect = 1e-23
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 HDQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVA 178
H +ALEL +M G P ++T SSALKACAG+ L++ G +LHS L+KMDM D F+ V
Sbjct: 193 HHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG 252
Query: 179 LIDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
LIDMYSKC +++ARLV+ LM E D+ A NA+ISG++QN+ D + LF
Sbjct: 253 LIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLF 301
Score = 71.2 bits (173), Expect = 8e-11
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 HDQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVA 178
H +A+ LF M + G RP ++ SS + C GL G ++H L+K+ D F + A
Sbjct: 92 HGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANA 151
Query: 179 LIDMYSKCGLLENARLVYDLMHEEDLAAINAMISG 283
L+DMY+K G+LE+A V+D + + D+ + NA+I+G
Sbjct: 152 LVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAG 186
Score = 67.4 bits (163), Expect = 1e-09
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Frame = +2
Query: 5 DQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMD-MLDVFVSVAL 181
++AL L+ +M G +P + SS L ACA L + G ++H +LK M D+F +L
Sbjct: 396 EEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSL 455
Query: 182 IDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
++MY+KCG +E+A + + + + +AMI G Q+ ++ L LF
Sbjct: 456 VNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLF 503
>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 678
Score = 109 bits (273), Expect = 2e-22
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 HDQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDML-DVFVSVA 178
H ALELF +M G P ++T SSALKACAG+ L++ G +LHS LLKMD+ D F++V
Sbjct: 321 HCWALELFGKMNRSGMCPNMFTISSALKACAGMGLKELGRQLHSSLLKMDIRSDSFLAVG 380
Query: 179 LIDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
LIDMYSKC L+ +ARL+++LM E DL NA I+G++QN D + + LF
Sbjct: 381 LIDMYSKCDLMTDARLLFNLMPERDLIVWNAAITGHSQNGEDLEAVSLF 429
Score = 67.4 bits (163), Expect = 1e-09
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +2
Query: 5 DQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDML-DVFVSVAL 181
++AL+L+ +M RP + SS L ACA L + G ++H +LK + D+F +L
Sbjct: 524 EEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFISDIFAGNSL 583
Query: 182 IDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
++MY+KCG +++A + + E + + +AMI G+ Q+ ++ L LF
Sbjct: 584 VNMYAKCGSIDDADRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLF 631
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +2
Query: 32 MTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVALIDMYSKCGL 208
M + G RP ++ S + AC GL G ++H L+K+ LD+F + AL+DMY+K G
Sbjct: 230 MILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDMYAKVGT 289
Query: 209 LENARLVYDLMHEEDLAAINAMISG 283
LE A V++ + + D+ + NA+I+G
Sbjct: 290 LEEAIRVFEEIAKPDIVSWNAIIAG 314
Score = 57.0 bits (136), Expect = 2e-06
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +2
Query: 8 QALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVALI 184
+A+ LF M G T S+ LK+ A L++ ++H+L LK D +V+ +LI
Sbjct: 424 EAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKSGFQFDNYVANSLI 483
Query: 185 DMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
D Y KCG +++A ++ DL A +MI+ Y+Q+ + L L+
Sbjct: 484 DTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQDGQGEEALKLY 530
>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 104 bits (260), Expect = 7e-21
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 HDQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDML-DVFVSVA 178
+D AL+L +M P+++T SSALKACA + L K G +LHS L+KMDM D FV V
Sbjct: 270 NDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVG 329
Query: 179 LIDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
LIDMYSKCGLL++AR+V+DLM +D+ N++ISGY+ D + + LF
Sbjct: 330 LIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLF 378
Score = 67.4 bits (163), Expect = 1e-09
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +2
Query: 5 DQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDML-DVFVSVAL 181
++AL+++ +M +P + FSS ACA L + G ++H +LK +L DVF +L
Sbjct: 473 EEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSL 532
Query: 182 IDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
++MY+KCG +++A +++ + + + +AMI G Q+ R L LF
Sbjct: 533 VNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLF 580
Score = 60.1 bits (144), Expect = 2e-07
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 8 QALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMD-MLDVFVSVALI 184
+A+ LF+ M G T S+ LK+ AG + F ++H++ +K D +V+ +L+
Sbjct: 373 EAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLL 432
Query: 185 DMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
D Y KC LLE+A V+++ EDL A +MI+ Y+Q + L ++
Sbjct: 433 DSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMY 479
Score = 59.3 bits (142), Expect = 3e-07
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = +2
Query: 20 LFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVALIDMYS 196
L ++M G P ++ S+ L ACAGL + +G+++H L+K+ D F + AL+DMY+
Sbjct: 175 LVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYA 234
Query: 197 KCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLML 322
K G E A V+ + + D+ + NA+I+G ++ + L L
Sbjct: 235 KSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKL 276
>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 101 bits (251), Expect = 7e-20
Identities = 52/109 (47%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 HDQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVA 178
+D AL L +M G RP ++T SSALKACA + ++ G +LHS L+KMD D+F +V
Sbjct: 265 NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG 324
Query: 179 LIDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
L+DMYSKC ++++AR YD M ++D+ A NA+ISGY+Q D + LF
Sbjct: 325 LVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLF 373
Score = 72.0 bits (175), Expect = 5e-11
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 8 QALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVALI 184
+A+ LF +M G P ++ S L ACAGL+ G ++H L+LKM + LD F + AL+
Sbjct: 166 EAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALV 225
Query: 185 DMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLML 322
DMYSK G +E A V+ + D+ + NA+I+G +D + LML
Sbjct: 226 DMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALML 271
Score = 70.1 bits (170), Expect = 2e-10
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +2
Query: 5 DQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMD-MLDVFVSVAL 181
++AL+L+ QM +P + SS L ACA L + G +LH +K M D+F S +L
Sbjct: 468 EEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSL 527
Query: 182 IDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
++MY+KCG +E+A + + + + +AMI GY Q+ ++ L LF
Sbjct: 528 VNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLF 575
Score = 65.5 bits (158), Expect = 4e-09
Identities = 36/108 (33%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = +2
Query: 5 DQALELFSQMTILGERPTVYTFSSALKACAGLRLQKFGVRLHSLLLKMDM-LDVFVSVAL 181
++AL +F++M +LG + +TF S LKAC+ R G ++H + + D FV+ L
Sbjct: 64 EEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTL 123
Query: 182 IDMYSKCGLLENARLVYDLMHEEDLAAINAMISGYTQNDSDRDGLMLF 325
+ MY+KCGLL+++R ++ + E ++ + NA+ S Y Q++ + + LF
Sbjct: 124 VVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLF 171