BLASTX nr result
ID: Cephaelis21_contig00010218
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00010218 (850 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530734.1| COMPASS component SWD2, putative [Ricinus co... 82 1e-13 ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B... 79 1e-12 ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B... 79 1e-12 ref|NP_569031.1| transducin/WD40 domain-containing protein [Arab... 76 8e-12 ref|NP_851281.1| transducin/WD40 domain-containing protein [Arab... 76 8e-12 >ref|XP_002530734.1| COMPASS component SWD2, putative [Ricinus communis] gi|223529698|gb|EEF31640.1| COMPASS component SWD2, putative [Ricinus communis] Length = 332 Score = 82.4 bits (202), Expect = 1e-13 Identities = 53/94 (56%), Positives = 61/94 (64%), Gaps = 13/94 (13%) Frame = -1 Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSLE*IC-------------LM 104 GRPAT YDDQG FTIA+GG+IR+FD+ K+EK GPFEIFS+ LM Sbjct: 163 GRPATAYDDQGLVFTIAFGGFIRMFDSRKYEK-GPFEIFSVGGDVSDAHVVKFSNDGRLM 221 Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2 L L T++ IHVLDSFRGTLLSTYNVK Sbjct: 222 L----LTTVDG----HIHVLDSFRGTLLSTYNVK 247 >ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus] Length = 332 Score = 79.0 bits (193), Expect = 1e-12 Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 13/94 (13%) Frame = -1 Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSL-E*IC------------LM 104 G+PAT YD+QG F IA+GGYIR+FDA K+EK GPF+IFS+ E + LM Sbjct: 163 GKPATAYDEQGVVFAIAFGGYIRMFDARKYEK-GPFDIFSVGEDLSDANIVKFSNDGRLM 221 Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2 L L T + IHVLDSFRGTLLSTYNVK Sbjct: 222 L----LTTSDG----HIHVLDSFRGTLLSTYNVK 247 >ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus] Length = 332 Score = 79.0 bits (193), Expect = 1e-12 Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 13/94 (13%) Frame = -1 Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSL-E*IC------------LM 104 G+PAT YD+QG F IA+GGYIR+FDA K+EK GPF+IFS+ E + LM Sbjct: 163 GKPATAYDEQGVVFAIAFGGYIRMFDARKYEK-GPFDIFSVGEDLSDANIVKFSNDGRLM 221 Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2 L L T + IHVLDSFRGTLLSTYNVK Sbjct: 222 L----LTTSDG----HIHVLDSFRGTLLSTYNVK 247 >ref|NP_569031.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|19698941|gb|AAL91206.1| WD repeat protein-like [Arabidopsis thaliana] gi|27311959|gb|AAO00945.1| WD repeat protein-like [Arabidopsis thaliana] gi|332010803|gb|AED98186.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 331 Score = 76.3 bits (186), Expect = 8e-12 Identities = 51/94 (54%), Positives = 58/94 (61%), Gaps = 13/94 (13%) Frame = -1 Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSLE*IC-------------LM 104 GRPA YDDQG F IA+GGYIR+FDA +EK GPFEIFS+ LM Sbjct: 162 GRPAAAYDDQGLIFAIAFGGYIRMFDARMYEK-GPFEIFSVGGDLSEANVVKFSNDGRLM 220 Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2 L L TM+ IHVLDSFRGTLLST++VK Sbjct: 221 L----LTTMDG----FIHVLDSFRGTLLSTFSVK 246 >ref|NP_851281.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|10177418|dbj|BAB10703.1| WD repeat protein-like [Arabidopsis thaliana] gi|222422867|dbj|BAH19420.1| AT5G66240 [Arabidopsis thaliana] gi|332010802|gb|AED98185.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 328 Score = 76.3 bits (186), Expect = 8e-12 Identities = 51/94 (54%), Positives = 58/94 (61%), Gaps = 13/94 (13%) Frame = -1 Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSLE*IC-------------LM 104 GRPA YDDQG F IA+GGYIR+FDA +EK GPFEIFS+ LM Sbjct: 159 GRPAAAYDDQGLIFAIAFGGYIRMFDARMYEK-GPFEIFSVGGDLSEANVVKFSNDGRLM 217 Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2 L L TM+ IHVLDSFRGTLLST++VK Sbjct: 218 L----LTTMDG----FIHVLDSFRGTLLSTFSVK 243