BLASTX nr result

ID: Cephaelis21_contig00010218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010218
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530734.1| COMPASS component SWD2, putative [Ricinus co...    82   1e-13
ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B...    79   1e-12
ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B...    79   1e-12
ref|NP_569031.1| transducin/WD40 domain-containing protein [Arab...    76   8e-12
ref|NP_851281.1| transducin/WD40 domain-containing protein [Arab...    76   8e-12

>ref|XP_002530734.1| COMPASS component SWD2, putative [Ricinus communis]
           gi|223529698|gb|EEF31640.1| COMPASS component SWD2,
           putative [Ricinus communis]
          Length = 332

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 53/94 (56%), Positives = 61/94 (64%), Gaps = 13/94 (13%)
 Frame = -1

Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSLE*IC-------------LM 104
           GRPAT YDDQG  FTIA+GG+IR+FD+ K+EK GPFEIFS+                 LM
Sbjct: 163 GRPATAYDDQGLVFTIAFGGFIRMFDSRKYEK-GPFEIFSVGGDVSDAHVVKFSNDGRLM 221

Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2
           L    L T++      IHVLDSFRGTLLSTYNVK
Sbjct: 222 L----LTTVDG----HIHVLDSFRGTLLSTYNVK 247


>ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus]
          Length = 332

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 13/94 (13%)
 Frame = -1

Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSL-E*IC------------LM 104
           G+PAT YD+QG  F IA+GGYIR+FDA K+EK GPF+IFS+ E +             LM
Sbjct: 163 GKPATAYDEQGVVFAIAFGGYIRMFDARKYEK-GPFDIFSVGEDLSDANIVKFSNDGRLM 221

Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2
           L    L T +      IHVLDSFRGTLLSTYNVK
Sbjct: 222 L----LTTSDG----HIHVLDSFRGTLLSTYNVK 247


>ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus]
          Length = 332

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 13/94 (13%)
 Frame = -1

Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSL-E*IC------------LM 104
           G+PAT YD+QG  F IA+GGYIR+FDA K+EK GPF+IFS+ E +             LM
Sbjct: 163 GKPATAYDEQGVVFAIAFGGYIRMFDARKYEK-GPFDIFSVGEDLSDANIVKFSNDGRLM 221

Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2
           L    L T +      IHVLDSFRGTLLSTYNVK
Sbjct: 222 L----LTTSDG----HIHVLDSFRGTLLSTYNVK 247


>ref|NP_569031.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|19698941|gb|AAL91206.1| WD repeat protein-like
           [Arabidopsis thaliana] gi|27311959|gb|AAO00945.1| WD
           repeat protein-like [Arabidopsis thaliana]
           gi|332010803|gb|AED98186.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 331

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 51/94 (54%), Positives = 58/94 (61%), Gaps = 13/94 (13%)
 Frame = -1

Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSLE*IC-------------LM 104
           GRPA  YDDQG  F IA+GGYIR+FDA  +EK GPFEIFS+                 LM
Sbjct: 162 GRPAAAYDDQGLIFAIAFGGYIRMFDARMYEK-GPFEIFSVGGDLSEANVVKFSNDGRLM 220

Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2
           L    L TM+      IHVLDSFRGTLLST++VK
Sbjct: 221 L----LTTMDG----FIHVLDSFRGTLLSTFSVK 246


>ref|NP_851281.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|10177418|dbj|BAB10703.1| WD repeat protein-like
           [Arabidopsis thaliana] gi|222422867|dbj|BAH19420.1|
           AT5G66240 [Arabidopsis thaliana]
           gi|332010802|gb|AED98185.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 328

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 51/94 (54%), Positives = 58/94 (61%), Gaps = 13/94 (13%)
 Frame = -1

Query: 244 GRPATTYDDQGHDFTIAYGGYIRIFDACKHEKMGPFEIFSLE*IC-------------LM 104
           GRPA  YDDQG  F IA+GGYIR+FDA  +EK GPFEIFS+                 LM
Sbjct: 159 GRPAAAYDDQGLIFAIAFGGYIRMFDARMYEK-GPFEIFSVGGDLSEANVVKFSNDGRLM 217

Query: 103 LMW*SLVTMED*CF*DIHVLDSFRGTLLSTYNVK 2
           L    L TM+      IHVLDSFRGTLLST++VK
Sbjct: 218 L----LTTMDG----FIHVLDSFRGTLLSTFSVK 243


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