BLASTX nr result

ID: Cephaelis21_contig00010148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010148
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [S...    76   1e-11
ref|XP_002526851.1| conserved hypothetical protein [Ricinus comm...    66   1e-08
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    64   5e-08
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    64   5e-08
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    64   5e-08

>ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [Sorghum bicolor]
           gi|241921597|gb|EER94741.1| hypothetical protein
           SORBIDRAFT_01g033270 [Sorghum bicolor]
          Length = 542

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = -2

Query: 780 DSGSALGRHLKLQVDIDLSRPLIRGTKLT-TEGKF-VWISFKYELLPNFCLYCGIIGHGE 607
           D GSA+G  L+++V ID+ +PL+RG  L   EG+   W   +YE LPNFC  CG++GH E
Sbjct: 17  DDGSAVGGFLRIKVKIDIRKPLMRGILLERAEGEDDCWCPIRYEYLPNFCYGCGLLGHVE 76

Query: 606 KECELRQDHADK*QLKSDQFGSWIRATTT 520
           KEC    D   + ++   QFG W+R T T
Sbjct: 77  KEC----DSCVEEEVGFKQFGDWLRVTPT 101


>ref|XP_002526851.1| conserved hypothetical protein [Ricinus communis]
           gi|223533750|gb|EEF35482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
 Frame = -2

Query: 777 SGSALGRHLKLQVDIDLSRPLIRGTKLTT-EGKFVWISFKYELLPNFCLYCGIIGHGEKE 601
           S   L R ++L++ IDL +PL + TK+     K +W+ F+YE LP+FC  CG +GH  ++
Sbjct: 26  SMEGLERSVRLRIRIDLRKPLRKRTKIAMGSNKDMWVFFRYERLPSFCYVCGCLGHVMRD 85

Query: 600 CELR--QDHADK*QLKSDQFGSWIRAT----TTVGTRREAKTVPAVK-VYSN 466
           C+ R   D  D    K   FG W+RA+    T V  + E+K+    K +Y+N
Sbjct: 86  CDSRTEDDGYDAMDEKLLPFGDWMRASPFKRTKVIIQDESKSYKTRKCLYNN 137


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = -2

Query: 780 DSGSALGRHLKLQVDIDLSRPLIRGTKLTT--EGKFVWISFKYELLPNFCLYCGIIGHGE 607
           + GSA+G+ L++++ ID+ +PL+RG  L    + + +W    YE LP+FC  CGI+GH E
Sbjct: 57  EDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTE 116

Query: 606 KECE 595
           K CE
Sbjct: 117 KLCE 120


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = -2

Query: 780 DSGSALGRHLKLQVDIDLSRPLIRGTKLTT--EGKFVWISFKYELLPNFCLYCGIIGHGE 607
           + GSA+G+ L++++ ID+ +PL+RG  L    + + +W    YE LP+FC  CGI+GH E
Sbjct: 126 EDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTE 185

Query: 606 KECE 595
           K CE
Sbjct: 186 KLCE 189


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = -2

Query: 780 DSGSALGRHLKLQVDIDLSRPLIRGTKLTT--EGKFVWISFKYELLPNFCLYCGIIGHGE 607
           + GSA+G+ L++++ ID+ +PL+RG  L    + + +W    YE LP+FC  CGI+GH E
Sbjct: 129 EDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTE 188

Query: 606 KECE 595
           K CE
Sbjct: 189 KLCE 192


Top