BLASTX nr result

ID: Cephaelis21_contig00010134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010134
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleo...   118   4e-25
emb|CAN67622.1| hypothetical protein VITISV_014712 [Vitis vinifera]   118   4e-25
ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleo...   117   1e-24
ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleo...   116   2e-24
ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative ...   116   2e-24

>ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
           vinifera] gi|297740131|emb|CBI30313.3| unnamed protein
           product [Vitis vinifera]
          Length = 80

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/95 (69%), Positives = 66/95 (69%)
 Frame = -2

Query: 285 MSRSGQPPDLKKYMDKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLNANRMVVGTL 106
           MSRSGQPPDLKKYMDKKLQ                             KLNANRMVVGTL
Sbjct: 1   MSRSGQPPDLKKYMDKKLQI----------------------------KLNANRMVVGTL 32

Query: 105 RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 1
           RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV
Sbjct: 33  RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 67


>emb|CAN67622.1| hypothetical protein VITISV_014712 [Vitis vinifera]
          Length = 148

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/95 (69%), Positives = 66/95 (69%)
 Frame = -2

Query: 285 MSRSGQPPDLKKYMDKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLNANRMVVGTL 106
           MSRSGQPPDLKKYMDKKLQ                             KLNANRMVVGTL
Sbjct: 1   MSRSGQPPDLKKYMDKKLQI----------------------------KLNANRMVVGTL 32

Query: 105 RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 1
           RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV
Sbjct: 33  RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 67


>ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Cucumis
           sativus] gi|449482341|ref|XP_004156252.1| PREDICTED:
           probable small nuclear ribonucleoprotein G-like [Cucumis
           sativus]
          Length = 80

 Score =  117 bits (292), Expect = 1e-24
 Identities = 64/95 (67%), Positives = 66/95 (69%)
 Frame = -2

Query: 285 MSRSGQPPDLKKYMDKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLNANRMVVGTL 106
           MSRSGQPPDLKKYMDKKLQ                             KLNANR+V+GTL
Sbjct: 1   MSRSGQPPDLKKYMDKKLQI----------------------------KLNANRLVIGTL 32

Query: 105 RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 1
           RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV
Sbjct: 33  RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 67


>ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine max]
           gi|356572580|ref|XP_003554446.1| PREDICTED: probable
           small nuclear ribonucleoprotein G-like [Glycine max]
           gi|255625815|gb|ACU13252.1| unknown [Glycine max]
          Length = 79

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/95 (68%), Positives = 65/95 (68%)
 Frame = -2

Query: 285 MSRSGQPPDLKKYMDKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLNANRMVVGTL 106
           MSRSGQPPDLKKYMDKKLQ                             KLNANRMVVGTL
Sbjct: 1   MSRSGQPPDLKKYMDKKLQI----------------------------KLNANRMVVGTL 32

Query: 105 RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 1
           RGFDQFMNLVVDNTVEVNGNEK DIGMVVIRGNSV
Sbjct: 33  RGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSV 67


>ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
           gi|223530136|gb|EEF32048.1| small nuclear
           ribonucleoprotein G, putative [Ricinus communis]
          Length = 80

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/95 (68%), Positives = 66/95 (69%)
 Frame = -2

Query: 285 MSRSGQPPDLKKYMDKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLNANRMVVGTL 106
           MSRSGQPPDLKKYMDKKLQ                             KLNANRMVVGTL
Sbjct: 1   MSRSGQPPDLKKYMDKKLQI----------------------------KLNANRMVVGTL 32

Query: 105 RGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 1
           RGFDQFMNLVVDNTVEVNG+EKTDIGMVVIRGNSV
Sbjct: 33  RGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSV 67


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