BLASTX nr result

ID: Cephaelis21_contig00010088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010088
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532181.1| Iron-sulfur assembly protein IscA, chloropla...   232   8e-59
ref|XP_002892574.1| hypothetical protein ARALYDRAFT_471163 [Arab...   229   7e-58
ref|NP_172520.1| Iron-sulfur assembly protein IscA [Arabidopsis ...   228   1e-57
gb|ABK95383.1| unknown [Populus trichocarpa]                          227   2e-57
gb|ABK96724.1| unknown [Populus trichocarpa x Populus deltoides]      227   3e-57

>ref|XP_002532181.1| Iron-sulfur assembly protein IscA, chloroplast precursor, putative
           [Ricinus communis] gi|223528129|gb|EEF30199.1|
           Iron-sulfur assembly protein IscA, chloroplast
           precursor, putative [Ricinus communis]
          Length = 178

 Score =  232 bits (591), Expect = 8e-59
 Identities = 126/184 (68%), Positives = 143/184 (77%), Gaps = 4/184 (2%)
 Frame = +1

Query: 49  MAFSSAASISNCRLLAKNSSNSGIPFQPPARTTSISFPKSSSLIFLNRKKNFLSVKASAS 228
           MAFS  A+I+   LL  ++ NS   F P     S+SF   SS + LNR  + LSV++S S
Sbjct: 1   MAFS--ATITTPSLLRLSNRNSASSFSP---LNSVSF--RSSRLNLNRT-SLLSVRSSVS 52

Query: 229 ----VEAPPISGGLAPAISLSENALKHLTRMRSERNEDLCLRIGVKQGGCSGMSYTMEFE 396
                 A P S G+APAIS++ENAL HL +MR +R+EDLCLRIGVKQGGCSGMSYTMEFE
Sbjct: 53  PPVGAAAAPASEGIAPAISVTENALNHLNKMRKDRDEDLCLRIGVKQGGCSGMSYTMEFE 112

Query: 397 KSENARPDDSIIEYNGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATQTCGCGK 576
              NARPDDS+IEYNGFVIVCDPKSLLF+FGMQLDYSDALIGGGFSFKNPNATQTCGCGK
Sbjct: 113 NRSNARPDDSVIEYNGFVIVCDPKSLLFVFGMQLDYSDALIGGGFSFKNPNATQTCGCGK 172

Query: 577 SFAA 588
           SFAA
Sbjct: 173 SFAA 176


>ref|XP_002892574.1| hypothetical protein ARALYDRAFT_471163 [Arabidopsis lyrata subsp.
           lyrata] gi|297338416|gb|EFH68833.1| hypothetical protein
           ARALYDRAFT_471163 [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score =  229 bits (583), Expect = 7e-58
 Identities = 124/183 (67%), Positives = 137/183 (74%), Gaps = 3/183 (1%)
 Frame = +1

Query: 49  MAFSSAASISNCRLLAKNSSNSGIPFQPPARTTSISFPKSSSLIFLN---RKKNFLSVKA 219
           MAF+   + SN   L    SN+ +P   P    SISFP S S + LN    ++N L V+ 
Sbjct: 1   MAFAGITTTSNPTFLGLRISNTSLPSVVPCN--SISFP-SLSYVNLNLNLNRRNRLFVR- 56

Query: 220 SASVEAPPISGGLAPAISLSENALKHLTRMRSERNEDLCLRIGVKQGGCSGMSYTMEFEK 399
           S SV A P   GL PAISLSENALKHL++MRSER EDLCLRIGVKQGGCSGMSYTM+FE 
Sbjct: 57  STSVPAAPAMEGLKPAISLSENALKHLSKMRSERGEDLCLRIGVKQGGCSGMSYTMDFEN 116

Query: 400 SENARPDDSIIEYNGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATQTCGCGKS 579
             NAR DDS IEY GF IVCDPKS+LF+FGMQLDYSDALIGGGFSF NPNATQTCGCGKS
Sbjct: 117 RANARADDSTIEYEGFTIVCDPKSMLFLFGMQLDYSDALIGGGFSFSNPNATQTCGCGKS 176

Query: 580 FAA 588
           FAA
Sbjct: 177 FAA 179


>ref|NP_172520.1| Iron-sulfur assembly protein IscA [Arabidopsis thaliana]
           gi|88984266|sp|Q9XIK3.2|ISCAP_ARATH RecName:
           Full=Iron-sulfur assembly protein IscA, chloroplastic;
           AltName: Full=Plastid SufA-like protein; AltName:
           Full=Protein scaffold protein AtCpIscA; Flags: Precursor
           gi|38603854|gb|AAR24672.1| At1g10500 [Arabidopsis
           thaliana] gi|45476537|gb|AAS65934.1| At1g10500
           [Arabidopsis thaliana] gi|63365310|gb|AAY40769.1|
           scaffold protein [Arabidopsis thaliana]
           gi|222422836|dbj|BAH19405.1| AT1G10500 [Arabidopsis
           thaliana] gi|332190465|gb|AEE28586.1| Iron-sulfur
           assembly protein IscA [Arabidopsis thaliana]
          Length = 180

 Score =  228 bits (581), Expect = 1e-57
 Identities = 122/181 (67%), Positives = 137/181 (75%), Gaps = 1/181 (0%)
 Frame = +1

Query: 49  MAFSSAASIS-NCRLLAKNSSNSGIPFQPPARTTSISFPKSSSLIFLNRKKNFLSVKASA 225
           MAF++  + S N   L    SN+ +  +      SISFP  S +     ++N LSV+ SA
Sbjct: 1   MAFATGITTSSNPTFLGLKISNTSL--RSVVSCNSISFPSLSYVNLNLNRRNRLSVR-SA 57

Query: 226 SVEAPPISGGLAPAISLSENALKHLTRMRSERNEDLCLRIGVKQGGCSGMSYTMEFEKSE 405
           SV A P   GL PAISLSENALKHL++MRSER EDLCLRIGVKQGGCSGMSYTM+FE   
Sbjct: 58  SVPAAPAMEGLKPAISLSENALKHLSKMRSERGEDLCLRIGVKQGGCSGMSYTMDFENRA 117

Query: 406 NARPDDSIIEYNGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFA 585
           NARPDDS IEY GF IVCDPKS+LF+FGMQLDYSDALIGGGFSF NPNATQTCGCGKSFA
Sbjct: 118 NARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYSDALIGGGFSFSNPNATQTCGCGKSFA 177

Query: 586 A 588
           A
Sbjct: 178 A 178


>gb|ABK95383.1| unknown [Populus trichocarpa]
          Length = 179

 Score =  227 bits (579), Expect = 2e-57
 Identities = 118/180 (65%), Positives = 141/180 (78%), Gaps = 14/180 (7%)
 Frame = +1

Query: 91  LAKNSSNSGIPFQPPA---------RTTSISFPKSS-----SLIFLNRKKNFLSVKASAS 228
           +A  SS +  P+ PP          +T S S P +S     S   L+R+   LS+++++S
Sbjct: 1   MALFSSTTAPPYSPPLLRLPDYTNKKTLSFSSPPNSLSFRFSTSNLSRRNPSLSLRSTSS 60

Query: 229 VEAPPISGGLAPAISLSENALKHLTRMRSERNEDLCLRIGVKQGGCSGMSYTMEFEKSEN 408
           + +PP+ G +APAIS++ENALKHL R+++ERNEDLCLRIGVKQGGCSGMSYTM+FE   N
Sbjct: 61  LASPPLEG-VAPAISVTENALKHLNRIKNERNEDLCLRIGVKQGGCSGMSYTMDFENRAN 119

Query: 409 ARPDDSIIEYNGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAA 588
           ARPDDSIIE NGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNAT+TCGCGKSFAA
Sbjct: 120 ARPDDSIIECNGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATKTCGCGKSFAA 179


>gb|ABK96724.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 179

 Score =  227 bits (578), Expect = 3e-57
 Identities = 118/180 (65%), Positives = 141/180 (78%), Gaps = 14/180 (7%)
 Frame = +1

Query: 91  LAKNSSNSGIPFQPPA---------RTTSISFPKSS-----SLIFLNRKKNFLSVKASAS 228
           +A  SS +  P+ PP          +T S S P +S     S   L+R+   LS+++++S
Sbjct: 1   MALFSSTTAPPYSPPLLRLPDYTNKKTLSFSSPPNSLSFRFSTSNLSRRNPSLSLQSTSS 60

Query: 229 VEAPPISGGLAPAISLSENALKHLTRMRSERNEDLCLRIGVKQGGCSGMSYTMEFEKSEN 408
           + +PP+ G +APAIS++ENALKHL R+++ERNEDLCLRIGVKQGGCSGMSYTM+FE   N
Sbjct: 61  LASPPLEG-VAPAISVTENALKHLNRIKNERNEDLCLRIGVKQGGCSGMSYTMDFENRAN 119

Query: 409 ARPDDSIIEYNGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAA 588
           ARPDDSIIE NGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNAT+TCGCGKSFAA
Sbjct: 120 ARPDDSIIECNGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATKTCGCGKSFAA 179


Top