BLASTX nr result

ID: Cephaelis21_contig00010028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010028
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   182   2e-43
ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi...   172   2e-40
ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...   163   1e-37
ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glyci...   161   4e-37
ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana] gi...   159   2e-36

>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
            gi|297733877|emb|CBI15124.3| unnamed protein product
            [Vitis vinifera]
          Length = 646

 Score =  182 bits (463), Expect = 2e-43
 Identities = 90/135 (66%), Positives = 107/135 (79%)
 Frame = -2

Query: 1561 KAFDPDIIIISAGFDAAINDPLGGCCVSPYGYSVMLSKLMEFARGKILMALEGGYNLTSL 1382
            K F+PDI+IISAGFDAAI DPLGGC V+PYGYSVML KLMEF+ GKI+MALEGGYNL SL
Sbjct: 262  KDFNPDIVIISAGFDAAIGDPLGGCHVTPYGYSVMLKKLMEFSEGKIIMALEGGYNLVSL 321

Query: 1381 ANSA*ACVEVLLYNQPVVGSLEAGPFKSTWRVIQLVREKLSAFWPILTKKLPEDATRCPV 1202
            ANS  ACVEVLL ++P+ GS EA PF+STWRVIQ VR++LSAFWP L  +LP+  T C  
Sbjct: 322  ANSVLACVEVLLEDKPIAGSSEAYPFESTWRVIQAVRQELSAFWPTLADELPKKLTSCKA 381

Query: 1201 WVNQILTEAANKLDE 1157
               Q+L  +++  DE
Sbjct: 382  SPLQLLVASSDSEDE 396


>ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi|222848818|gb|EEE86365.1|
            histone deacetylase [Populus trichocarpa]
          Length = 646

 Score =  172 bits (436), Expect = 2e-40
 Identities = 80/112 (71%), Positives = 98/112 (87%)
 Frame = -2

Query: 1561 KAFDPDIIIISAGFDAAINDPLGGCCVSPYGYSVMLSKLMEFARGKILMALEGGYNLTSL 1382
            K FDPD+II+SAGFDAA+ DPLGGCCV+PYGYSVML KLM+FA+GKI++ALEGGYNL S+
Sbjct: 258  KKFDPDMIIVSAGFDAAVGDPLGGCCVTPYGYSVMLKKLMDFAQGKIMLALEGGYNLDSI 317

Query: 1381 ANSA*ACVEVLLYNQPVVGSLEAGPFKSTWRVIQLVREKLSAFWPILTKKLP 1226
            ANS  AC++VLL ++PV GS+EA PF+STWRVIQ VR+KLS +WP L  +LP
Sbjct: 318  ANSFLACMKVLLEDKPVSGSVEAYPFESTWRVIQAVRKKLSPYWPALADELP 369


>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
            gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
            putative [Ricinus communis]
          Length = 654

 Score =  163 bits (412), Expect = 1e-37
 Identities = 77/112 (68%), Positives = 94/112 (83%)
 Frame = -2

Query: 1561 KAFDPDIIIISAGFDAAINDPLGGCCVSPYGYSVMLSKLMEFARGKILMALEGGYNLTSL 1382
            K F+PD+IIISAGFDAA+ DPLGGC ++PYGYSVML KLM+FA GKI++ALEGGYNL S+
Sbjct: 265  KEFNPDMIIISAGFDAAVGDPLGGCRITPYGYSVMLKKLMDFANGKIVLALEGGYNLESI 324

Query: 1381 ANSA*ACVEVLLYNQPVVGSLEAGPFKSTWRVIQLVREKLSAFWPILTKKLP 1226
            ANS  AC+EVLL ++P+ GS EA PF+STWRVIQ VR+KLS +W  L  +LP
Sbjct: 325  ANSFFACMEVLLESKPIAGSSEAYPFESTWRVIQAVRKKLSGYWATLADELP 376


>ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glycine max]
          Length = 652

 Score =  161 bits (408), Expect = 4e-37
 Identities = 75/112 (66%), Positives = 93/112 (83%)
 Frame = -2

Query: 1561 KAFDPDIIIISAGFDAAINDPLGGCCVSPYGYSVMLSKLMEFARGKILMALEGGYNLTSL 1382
            K F+PDIII+SAGFDAA+ DPLGGC V+P+GYSV+L KLM FA G+I++ LEGGYNL S+
Sbjct: 265  KEFNPDIIIVSAGFDAAVGDPLGGCLVTPFGYSVLLEKLMNFAEGRIVLILEGGYNLDSI 324

Query: 1381 ANSA*ACVEVLLYNQPVVGSLEAGPFKSTWRVIQLVREKLSAFWPILTKKLP 1226
            + S  AC+EVLL +QPV+GS EA PF+STWRVIQ VR+ LS FWP L ++LP
Sbjct: 325  SKSMHACLEVLLADQPVIGSAEAYPFESTWRVIQAVRQVLSPFWPTLARELP 376


>ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana]
            gi|75247631|sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone
            deacetylase 5 gi|20259320|gb|AAM13986.1| putative histone
            deacetylase [Arabidopsis thaliana]
            gi|21539579|gb|AAM53342.1| histone deacetylase-like
            protein [Arabidopsis thaliana] gi|23197730|gb|AAN15392.1|
            histone deacetylase-like protein [Arabidopsis thaliana]
            gi|332010034|gb|AED97417.1| histone deacetylase 5
            [Arabidopsis thaliana]
          Length = 660

 Score =  159 bits (402), Expect = 2e-36
 Identities = 74/111 (66%), Positives = 93/111 (83%)
 Frame = -2

Query: 1561 KAFDPDIIIISAGFDAAINDPLGGCCVSPYGYSVMLSKLMEFARGKILMALEGGYNLTSL 1382
            + F+PD+I +SAGFDAAINDPLGGCCV+PYGYSVML KLMEFA+GKI++ALEGGYNL S+
Sbjct: 277  REFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKLMEFAQGKIVLALEGGYNLDSI 336

Query: 1381 ANSA*ACVEVLLYNQPVVGSLEAGPFKSTWRVIQLVREKLSAFWPILTKKL 1229
            A S+ ACV+VLL ++ + G  EA PF+STWRVIQ VR++L  +WP L  +L
Sbjct: 337  AKSSLACVQVLLEDKQIQGPPEAYPFESTWRVIQAVRKRLCTYWPSLADEL 387


Top