BLASTX nr result

ID: Cephaelis21_contig00009998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009998
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    130   1e-28
emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]   130   1e-28
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]   130   1e-28
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...   129   2e-28
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th...   129   2e-28

>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/106 (56%), Positives = 84/106 (79%)
 Frame = +2

Query: 8   LFLQFQR*LKIFFQTRILSVFSNNGGEYQGLLPVFNSCGISHFTTPPYTPEHNGTAERRH 187
           +F+ F+  ++  FQ+RI +++S+NGGE+ GL P   + GISH T+PP+TPEHNG AER+H
Sbjct: 553 VFVAFKALVENRFQSRIRTLYSDNGGEFIGLRPFLAAHGISHLTSPPHTPEHNGLAERKH 612

Query: 188 RHIVETGLSLLHFASLPLSYWSHAFQAAVYLINRLPSSVLSFTTPF 325
           RHIVETGL+LL  ASLP ++W++AF  AVYLINR+P+ VL  T+P+
Sbjct: 613 RHIVETGLALLTHASLPKTFWTYAFATAVYLINRMPTEVLQGTSPY 658


>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/106 (56%), Positives = 80/106 (75%)
 Frame = +2

Query: 8   LFLQFQR*LKIFFQTRILSVFSNNGGEYQGLLPVFNSCGISHFTTPPYTPEHNGTAERRH 187
           +F++F+  ++ FF   I++++S+NGGEYQ L       G+SH T+PP+TPEHNG +ERRH
Sbjct: 541 VFVRFKALVEKFFNRPIITLYSDNGGEYQALSSFLTINGVSHLTSPPHTPEHNGYSERRH 600

Query: 188 RHIVETGLSLLHFASLPLSYWSHAFQAAVYLINRLPSSVLSFTTPF 325
           RHIVETGLSLL  AS+PLSYW  AF  AVYLINRLP+  L+  +P+
Sbjct: 601 RHIVETGLSLLTHASMPLSYWPFAFSTAVYLINRLPTPTLNHLSPY 646


>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
          Length = 1442

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/107 (57%), Positives = 81/107 (75%)
 Frame = +2

Query: 8   LFLQFQR*LKIFFQTRILSVFSNNGGEYQGLLPVFNSCGISHFTTPPYTPEHNGTAERRH 187
           +F QF+  ++  FQ +I +++S+NGGE+  L P  N  GISH+TT PYTP+ NG +ERRH
Sbjct: 624 IFPQFKIFVETRFQAKIKTLYSDNGGEFISLKPFLNLHGISHYTTAPYTPQQNGVSERRH 683

Query: 188 RHIVETGLSLLHFASLPLSYWSHAFQAAVYLINRLPSSVLSFTTPFE 328
           RH+VETGL+LL  ASLPLSYW HAF+ A YLINR P+ +L+  +PFE
Sbjct: 684 RHLVETGLTLLSDASLPLSYWPHAFRTATYLINRQPTPLLTNKSPFE 730


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
           gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/106 (56%), Positives = 80/106 (75%)
 Frame = +2

Query: 11  FLQFQR*LKIFFQTRILSVFSNNGGEYQGLLPVFNSCGISHFTTPPYTPEHNGTAERRHR 190
           F+ F+  L+  FQTRI + +S+NGGE+  L   F+  GISH T+PP+TPEHNG +ER+HR
Sbjct: 571 FITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHR 630

Query: 191 HIVETGLSLLHFASLPLSYWSHAFQAAVYLINRLPSSVLSFTTPFE 328
           HIVETGL+LL  AS+P +YW +AF  AVYLINRLP+ +L   +PF+
Sbjct: 631 HIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQ 676


>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
          Length = 847

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/106 (56%), Positives = 80/106 (75%)
 Frame = +2

Query: 11  FLQFQR*LKIFFQTRILSVFSNNGGEYQGLLPVFNSCGISHFTTPPYTPEHNGTAERRHR 190
           F+ F+  L+  FQTRI + +S+NGGE+  L   F+  GISH T+PP+TPEHNG +ER+HR
Sbjct: 536 FITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHR 595

Query: 191 HIVETGLSLLHFASLPLSYWSHAFQAAVYLINRLPSSVLSFTTPFE 328
           HIVETGL+LL  AS+P +YW +AF  AVYLINRLP+ +L   +PF+
Sbjct: 596 HIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQ 641


Top