BLASTX nr result

ID: Cephaelis21_contig00009938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009938
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521466.1| F-box/LRR-repeat protein, putative [Ricinus ...   102   4e-20
emb|CBI34868.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002272892.1| PREDICTED: SCF E3 ubiquitin ligase complex F...    96   2e-18
ref|XP_002323795.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
emb|CAN59886.1| hypothetical protein VITISV_026168 [Vitis vinifera]    91   1e-16

>ref|XP_002521466.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223539365|gb|EEF40956.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 484

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/84 (59%), Positives = 62/84 (73%)
 Frame = -3

Query: 252 CRTVVEGVLLKLAENCVSLNSLSVYDGGNKEGLLQFIRGGRCNVQKXXXXXXXXXXXXXL 73
           CR+++ GVLL+LAENC SLNSL +YDGG++EGLL FI   RC++QK             L
Sbjct: 255 CRSIIHGVLLRLAENCDSLNSLLIYDGGSREGLLHFISNCRCDLQKLDFRLPLDLNNDHL 314

Query: 72  IAISQNFRYLSILKLQSCCLVTGE 1
           +AI+ NFR LSIL+LQSCCLVTGE
Sbjct: 315 LAIAMNFRNLSILRLQSCCLVTGE 338


>emb|CBI34868.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/84 (55%), Positives = 63/84 (75%)
 Frame = -3

Query: 252 CRTVVEGVLLKLAENCVSLNSLSVYDGGNKEGLLQFIRGGRCNVQKXXXXXXXXXXXXXL 73
           CR++V+GVLLKLA+NC+SL+SL VYDGG++EG L+FI   RCN++K             L
Sbjct: 111 CRSIVDGVLLKLAQNCLSLDSLLVYDGGSEEGFLRFINQCRCNLRKLDLRLPLDLHNSHL 170

Query: 72  IAISQNFRYLSILKLQSCCLVTGE 1
           +AI+QN R LS ++LQSCCLVTG+
Sbjct: 171 LAIAQNCRGLSCIRLQSCCLVTGD 194


>ref|XP_002272892.1| PREDICTED: SCF E3 ubiquitin ligase complex F-box protein grrA
           [Vitis vinifera]
          Length = 470

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/84 (55%), Positives = 63/84 (75%)
 Frame = -3

Query: 252 CRTVVEGVLLKLAENCVSLNSLSVYDGGNKEGLLQFIRGGRCNVQKXXXXXXXXXXXXXL 73
           CR++V+GVLLKLA+NC+SL+SL VYDGG++EG L+FI   RCN++K             L
Sbjct: 240 CRSIVDGVLLKLAQNCLSLDSLLVYDGGSEEGFLRFINQCRCNLRKLDLRLPLDLHNSHL 299

Query: 72  IAISQNFRYLSILKLQSCCLVTGE 1
           +AI+QN R LS ++LQSCCLVTG+
Sbjct: 300 LAIAQNCRGLSCIRLQSCCLVTGD 323


>ref|XP_002323795.1| predicted protein [Populus trichocarpa] gi|222866797|gb|EEF03928.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/84 (59%), Positives = 57/84 (67%)
 Frame = -3

Query: 252 CRTVVEGVLLKLAENCVSLNSLSVYDGGNKEGLLQFIRGGRCNVQKXXXXXXXXXXXXXL 73
           CR++V GVLLKLAENC SL SL VYDGGN+EGL  FI   RC++QK             L
Sbjct: 255 CRSIVNGVLLKLAENCDSLYSLLVYDGGNREGLHHFISSCRCDLQKLDFRLPLDLRNDHL 314

Query: 72  IAISQNFRYLSILKLQSCCLVTGE 1
            AI  NFR LS L+LQSCCLV+GE
Sbjct: 315 SAIGLNFRGLSTLRLQSCCLVSGE 338


>emb|CAN59886.1| hypothetical protein VITISV_026168 [Vitis vinifera]
          Length = 1027

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/82 (54%), Positives = 61/82 (74%)
 Frame = -3

Query: 246  TVVEGVLLKLAENCVSLNSLSVYDGGNKEGLLQFIRGGRCNVQKXXXXXXXXXXXXXLIA 67
            ++V+GVLLKLA+NC+SL+SL VYDGG++EG L+FI   RCN++K             L+A
Sbjct: 799  SIVDGVLLKLAQNCLSLDSLLVYDGGSEEGFLRFINQCRCNLRKLDLRLPLDLHNSHLLA 858

Query: 66   ISQNFRYLSILKLQSCCLVTGE 1
            I+QN R LS ++LQSCCLVTG+
Sbjct: 859  IAQNCRGLSCIRLQSCCLVTGD 880


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