BLASTX nr result
ID: Cephaelis21_contig00009935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00009935
(331 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera] 103 8e-32
emb|CBI19136.3| unnamed protein product [Vitis vinifera] 103 8e-32
ref|XP_002306584.1| predicted protein [Populus trichocarpa] gi|2... 105 2e-27
ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent hel... 103 3e-27
ref|XP_003627257.1| Helicase sen1 [Medicago truncatula] gi|35552... 97 3e-27
>emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
Length = 1408
Score = 103 bits (256), Expect(3) = 8e-32
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2
Query: 237 VSGTVRRHIPIDTRDSHGAILHFYVGDSYDSNSKPDDDHILRKLQPRGI*YLTVLGSFAT 58
V+GTVRRH PIDTRD GAILHFYVGDSYD NSK DDHILRKL P+GI YLTVLGS AT
Sbjct: 602 VAGTVRRHNPIDTRDPVGAILHFYVGDSYDPNSKV-DDHILRKLHPKGIWYLTVLGSLAT 660
Query: 57 TQRE 46
TQRE
Sbjct: 661 TQRE 664
Score = 48.1 bits (113), Expect(3) = 8e-32
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = -1
Query: 331 AVLSSPKPGSNRFKSSSISALEDDEEAEINGRVWNS*KTH 212
A+LS+P+PGS R K ++ S++EDDEEAEI+GRV + + H
Sbjct: 570 AILSAPRPGSVRSKRNNTSSIEDDEEAEISGRVAGTVRRH 609
Score = 31.2 bits (69), Expect(3) = 8e-32
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 49 RMQNAILQPSPDHFPK 2
+MQ AIL PSP+HFPK
Sbjct: 677 QMQTAILHPSPEHFPK 692
>emb|CBI19136.3| unnamed protein product [Vitis vinifera]
Length = 1073
Score = 103 bits (256), Expect(3) = 8e-32
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2
Query: 237 VSGTVRRHIPIDTRDSHGAILHFYVGDSYDSNSKPDDDHILRKLQPRGI*YLTVLGSFAT 58
V+GTVRRH PIDTRD GAILHFYVGDSYD NSK DDHILRKL P+GI YLTVLGS AT
Sbjct: 477 VAGTVRRHNPIDTRDPVGAILHFYVGDSYDPNSKV-DDHILRKLHPKGIWYLTVLGSLAT 535
Query: 57 TQRE 46
TQRE
Sbjct: 536 TQRE 539
Score = 48.1 bits (113), Expect(3) = 8e-32
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = -1
Query: 331 AVLSSPKPGSNRFKSSSISALEDDEEAEINGRVWNS*KTH 212
A+LS+P+PGS R K ++ S++EDDEEAEI+GRV + + H
Sbjct: 445 AILSAPRPGSVRSKRNNTSSIEDDEEAEISGRVAGTVRRH 484
Score = 31.2 bits (69), Expect(3) = 8e-32
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 49 RMQNAILQPSPDHFPK 2
+MQ AIL PSP+HFPK
Sbjct: 552 QMQTAILHPSPEHFPK 567
>ref|XP_002306584.1| predicted protein [Populus trichocarpa] gi|222856033|gb|EEE93580.1|
predicted protein [Populus trichocarpa]
Length = 1147
Score = 105 bits (262), Expect(3) = 2e-27
Identities = 50/64 (78%), Positives = 57/64 (89%)
Frame = -2
Query: 237 VSGTVRRHIPIDTRDSHGAILHFYVGDSYDSNSKPDDDHILRKLQPRGI*YLTVLGSFAT 58
V+GTVRRHIP+D+RD GAILHF+VGDSYD +SK D+DHILRKLQPRG +LTVLGS AT
Sbjct: 345 VAGTVRRHIPLDSRDPPGAILHFFVGDSYDPHSKVDEDHILRKLQPRGTWFLTVLGSLAT 404
Query: 57 TQRE 46
TQRE
Sbjct: 405 TQRE 408
Score = 31.6 bits (70), Expect(3) = 2e-27
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 67 FCYHPKRMQNAILQPSPDHFPK 2
FC +MQ AIL+PS DHFPK
Sbjct: 415 FCRLNLQMQAAILKPSSDHFPK 436
Score = 30.8 bits (68), Expect(3) = 2e-27
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -1
Query: 331 AVLSSPKPGSNRFKSSSISALEDDEEAEINGRVWNS*KTH 212
AVLS+P+PG+ DDEE +INGRV + + H
Sbjct: 325 AVLSTPRPGT------------DDEEPDINGRVAGTVRRH 352
>ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Vitis vinifera]
Length = 1375
Score = 103 bits (256), Expect(3) = 3e-27
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2
Query: 237 VSGTVRRHIPIDTRDSHGAILHFYVGDSYDSNSKPDDDHILRKLQPRGI*YLTVLGSFAT 58
V+GTVRRH PIDTRD GAILHFYVGDSYD NSK DDHILRKL P+GI YLTVLGS AT
Sbjct: 569 VAGTVRRHNPIDTRDPVGAILHFYVGDSYDPNSKV-DDHILRKLHPKGIWYLTVLGSLAT 627
Query: 57 TQRE 46
TQRE
Sbjct: 628 TQRE 631
Score = 32.7 bits (73), Expect(3) = 3e-27
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -1
Query: 331 AVLSSPKPGSNRFKSSSISALEDDEEAEINGRVWNS*KTH 212
A+LS+P+PGS DDEEAEI+GRV + + H
Sbjct: 549 AILSAPRPGS------------DDEEAEISGRVAGTVRRH 576
Score = 31.2 bits (69), Expect(3) = 3e-27
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 49 RMQNAILQPSPDHFPK 2
+MQ AIL PSP+HFPK
Sbjct: 644 QMQTAILHPSPEHFPK 659
>ref|XP_003627257.1| Helicase sen1 [Medicago truncatula] gi|355521279|gb|AET01733.1|
Helicase sen1 [Medicago truncatula]
Length = 1516
Score = 96.7 bits (239), Expect(3) = 3e-27
Identities = 50/64 (78%), Positives = 53/64 (82%)
Frame = -2
Query: 237 VSGTVRRHIPIDTRDSHGAILHFYVGDSYDSNSKPDDDHILRKLQPRGI*YLTVLGSFAT 58
V GTVRRHIPIDTRD GAILH+YVGDSYD S+ DDDHI+RKLQ I YLTVLGS AT
Sbjct: 641 VVGTVRRHIPIDTRDPPGAILHYYVGDSYDP-SRGDDDHIVRKLQTGSIWYLTVLGSLAT 699
Query: 57 TQRE 46
TQRE
Sbjct: 700 TQRE 703
Score = 36.6 bits (83), Expect(3) = 3e-27
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = -1
Query: 331 AVLSSPKPGSNRFKSSSISALEDDEEAEINGRVWNS*KTH 212
A+LS+P+PGS R K ++ S D E+EI GRV + + H
Sbjct: 609 AILSTPRPGSVRSKQNNSSLGHDSGESEITGRVVGTVRRH 648
Score = 33.5 bits (75), Expect(3) = 3e-27
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = -1
Query: 49 RMQNAILQPSPDHFPK 2
+MQ+AILQPSP+HFPK
Sbjct: 716 QMQSAILQPSPEHFPK 731