BLASTX nr result
ID: Cephaelis21_contig00009852
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00009852
(1463 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 249 e-125
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 249 e-125
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 244 e-124
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho... 241 e-123
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 239 e-122
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 249 bits (637), Expect(2) = e-125
Identities = 113/146 (77%), Positives = 130/146 (89%), Gaps = 4/146 (2%)
Frame = +3
Query: 483 CLIKSFTREVARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDYYGIKTEAEILSG 662
C I+SFTR+VAR+SYDPDMEV GFEDY+ +AF YKSEYDYKLGNLMDYYGIKTE+EILSG
Sbjct: 946 CNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSG 1005
Query: 663 GIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFNKKG----GQLDDSFAKASAWYHVTYH 830
IM+MS+ FDR+KDAEA+G+AV+SLRKEARTWFNK G + DD +AKASAWYHVTYH
Sbjct: 1006 SIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYH 1065
Query: 831 PTYWGCYNEGLNRAHFISFPWCVYDK 908
P YWGCYNEG++R HF+SFPWCVYDK
Sbjct: 1066 PDYWGCYNEGMDRDHFLSFPWCVYDK 1091
Score = 225 bits (574), Expect(2) = e-125
Identities = 107/127 (84%), Positives = 115/127 (90%)
Frame = +1
Query: 1 ECSGSDLDGDIYFVCWDPDLIPRQQMSPMDYTPAPTVQLDHEVTIEEVEEYFTNYIVNDS 180
ECSGSDLDGDIYFVCWD DLIP QQ++PMDYTPAPT LDH+V IEEVEEYFTNYIVNDS
Sbjct: 799 ECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDS 858
Query: 181 LGVIANAHTVFADRELLKAMSEPCLELAKLFSIAVDFPKTGVPAEIPSHLRVKEYPDFME 360
LG+IANAHTVFAD+E KA +PC ELAKLFSIAVDFPKTGVPAEIP +LRVKEYPDFME
Sbjct: 859 LGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFME 918
Query: 361 KSDKSTY 381
K+DK TY
Sbjct: 919 KADKPTY 925
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 249 bits (637), Expect(2) = e-125
Identities = 113/146 (77%), Positives = 130/146 (89%), Gaps = 4/146 (2%)
Frame = +3
Query: 483 CLIKSFTREVARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDYYGIKTEAEILSG 662
C I+SFTR+VAR+SYDPDMEV GFEDY+ +AF YKSEYDYKLGNLMDYYGIKTE+EILSG
Sbjct: 744 CNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSG 803
Query: 663 GIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFNKKG----GQLDDSFAKASAWYHVTYH 830
IM+MS+ FDR+KDAEA+G+AV+SLRKEARTWFNK G + DD +AKASAWYHVTYH
Sbjct: 804 SIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYH 863
Query: 831 PTYWGCYNEGLNRAHFISFPWCVYDK 908
P YWGCYNEG++R HF+SFPWCVYDK
Sbjct: 864 PDYWGCYNEGMDRDHFLSFPWCVYDK 889
Score = 225 bits (574), Expect(2) = e-125
Identities = 107/127 (84%), Positives = 115/127 (90%)
Frame = +1
Query: 1 ECSGSDLDGDIYFVCWDPDLIPRQQMSPMDYTPAPTVQLDHEVTIEEVEEYFTNYIVNDS 180
ECSGSDLDGDIYFVCWD DLIP QQ++PMDYTPAPT LDH+V IEEVEEYFTNYIVNDS
Sbjct: 597 ECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDS 656
Query: 181 LGVIANAHTVFADRELLKAMSEPCLELAKLFSIAVDFPKTGVPAEIPSHLRVKEYPDFME 360
LG+IANAHTVFAD+E KA +PC ELAKLFSIAVDFPKTGVPAEIP +LRVKEYPDFME
Sbjct: 657 LGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFME 716
Query: 361 KSDKSTY 381
K+DK TY
Sbjct: 717 KADKPTY 723
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 244 bits (623), Expect(2) = e-124
Identities = 112/139 (80%), Positives = 124/139 (89%)
Frame = +3
Query: 489 IKSFTREVARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDYYGIKTEAEILSGGI 668
I +FTR+VAR+SYD D+EVDGFEDY+DEAFDYKSEYD KLGNLMDYYGIKTEAE LSGGI
Sbjct: 638 ITTFTRDVARRSYDTDLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSGGI 697
Query: 669 MKMSRFFDRKKDAEAVGMAVRSLRKEARTWFNKKGGQLDDSFAKASAWYHVTYHPTYWGC 848
MK S+ FDR++DAEA+G+AVRSLRKEARTWF K+ +DD AKASAWYHV YHPTYWGC
Sbjct: 698 MKASKTFDRRRDAEAIGVAVRSLRKEARTWF-KRRSDIDDLLAKASAWYHVAYHPTYWGC 756
Query: 849 YNEGLNRAHFISFPWCVYD 905
YNEGL R HFISFPWCVYD
Sbjct: 757 YNEGLKRDHFISFPWCVYD 775
Score = 229 bits (585), Expect(2) = e-124
Identities = 107/127 (84%), Positives = 117/127 (92%)
Frame = +1
Query: 1 ECSGSDLDGDIYFVCWDPDLIPRQQMSPMDYTPAPTVQLDHEVTIEEVEEYFTNYIVNDS 180
ECSGSDLDGDIYFVCWDPDLIP +Q+ PMDYTPAP++QLDH+VTIEEVEEYFTNY+VND
Sbjct: 489 ECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTNYMVNDG 548
Query: 181 LGVIANAHTVFADRELLKAMSEPCLELAKLFSIAVDFPKTGVPAEIPSHLRVKEYPDFME 360
LGVIANAH VFADRE AMS+PC+ELA+LFSIAVDFPKTGVPAEIPS LR KEYPDFME
Sbjct: 549 LGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 608
Query: 361 KSDKSTY 381
K DK+TY
Sbjct: 609 KPDKTTY 615
>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
[Populus trichocarpa]
Length = 1133
Score = 241 bits (614), Expect(2) = e-123
Identities = 110/147 (74%), Positives = 126/147 (85%), Gaps = 4/147 (2%)
Frame = +3
Query: 480 TCLIKSFTREVARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDYYGIKTEAEILS 659
T I+SFT +VAR+ YDPDMEVDGFEDY+D+AF YKS YDYKLGNLM+YYGIKTEAE+LS
Sbjct: 955 TSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLS 1014
Query: 660 GGIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFNKKG----GQLDDSFAKASAWYHVTY 827
G MKMS+ F +K+DAEA+GMAVRSL+KEAR+WFN+KG Q DD AKASAWYHVTY
Sbjct: 1015 GSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTY 1074
Query: 828 HPTYWGCYNEGLNRAHFISFPWCVYDK 908
H YWGCYNEG+NR HF+SFPWCVYDK
Sbjct: 1075 HHNYWGCYNEGMNRDHFLSFPWCVYDK 1101
Score = 229 bits (584), Expect(2) = e-123
Identities = 107/127 (84%), Positives = 117/127 (92%)
Frame = +1
Query: 1 ECSGSDLDGDIYFVCWDPDLIPRQQMSPMDYTPAPTVQLDHEVTIEEVEEYFTNYIVNDS 180
ECSGSDLDGDIYFVCWDP+LIP QQ+SPMDYTP P +QLDH+VTIEEVEEYFTNYIVNDS
Sbjct: 809 ECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDS 868
Query: 181 LGVIANAHTVFADRELLKAMSEPCLELAKLFSIAVDFPKTGVPAEIPSHLRVKEYPDFME 360
LGVIANAHT AD+E LKAMSEPC+ELA+ FSIAVDFPKTGVPAEIPS+LR +EYPDFME
Sbjct: 869 LGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFME 928
Query: 361 KSDKSTY 381
K DK +Y
Sbjct: 929 KPDKPSY 935
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 239 bits (610), Expect(2) = e-122
Identities = 108/146 (73%), Positives = 128/146 (87%), Gaps = 4/146 (2%)
Frame = +3
Query: 483 CLIKSFTREVARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDYYGIKTEAEILSG 662
C IK TRE ++ YDPDMEV+GFEDY+D+AF +KS+YDYKLGNLMDYYG+KTEAEIL G
Sbjct: 934 CSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGG 993
Query: 663 GIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFNKKGGQL----DDSFAKASAWYHVTYH 830
GIMKMSR F +K+DAEA+ MAVRSLRKEAR+WFN+KG +L DD++AKASAWY+VTYH
Sbjct: 994 GIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYH 1053
Query: 831 PTYWGCYNEGLNRAHFISFPWCVYDK 908
P+YWG YNEG+NR HF+SFPWCVYDK
Sbjct: 1054 PSYWGQYNEGMNRDHFLSFPWCVYDK 1079
Score = 226 bits (576), Expect(2) = e-122
Identities = 105/127 (82%), Positives = 115/127 (90%)
Frame = +1
Query: 1 ECSGSDLDGDIYFVCWDPDLIPRQQMSPMDYTPAPTVQLDHEVTIEEVEEYFTNYIVNDS 180
ECSGSDLDGD+YFVCWDP+LIP +Q+ PMDY+PA T +LDHEVTIEE+EEYFTNYIVNDS
Sbjct: 787 ECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDS 846
Query: 181 LGVIANAHTVFADRELLKAMSEPCLELAKLFSIAVDFPKTGVPAEIPSHLRVKEYPDFME 360
LG+I+NAHT FADRE KAMS PCLELAKLFSIAVDFPKTGVPAEIP LRVKEYPDFME
Sbjct: 847 LGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFME 906
Query: 361 KSDKSTY 381
K DK +Y
Sbjct: 907 KPDKPSY 913