BLASTX nr result

ID: Cephaelis21_contig00009812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009812
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    70   5e-10
ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein A...    58   2e-07
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    56   6e-06
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    56   6e-06
ref|NP_001045287.1| Os01g0930300 [Oryza sativa Japonica Group] g...    56   6e-06

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
 Frame = +1

Query: 166  KLNVDGSSLGNPGQAGGGIAIRDTGGNLFLAQAIYFG*APAMYAEAKALLCGLQLCVAYG 345
            KLN DGS +   G+ GGG  +R+  G + +A  I  G   + +AEA ++L G+QLC+  G
Sbjct: 1001 KLNTDGSCVN--GRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAMSMLHGMQLCIQRG 1058

Query: 346  LQPVHVETDSMNLIHFFHSNRAWPWRIYSILASVKPLLQAVSL-------S*GQLCCRLF 504
            +  +  ETDS+ L      N + PWR+Y  +  ++ +++              Q   +L 
Sbjct: 1059 VNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKLA 1118

Query: 505  CYIASSECVSVTFRQGSLPSKLRGLIFLD*IGFPNLR 615
                S++   V     +LPS ++GL+ LD +  P  R
Sbjct: 1119 SISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155


>ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus] gi|449488498|ref|XP_004158057.1| PREDICTED:
           putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 205

 Score = 58.2 bits (139), Expect(2) = 2e-07
 Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
 Frame = +1

Query: 73  VFSRYLTLSLRLQHRIRILVAVS*QLPHVPW-KLNVDGSSLGN--PGQAGGGIAIRDTGG 243
           + S+ L L+ R  H+  I + V+   P   W KLN DGSS G   PG A  G  +RD   
Sbjct: 13  IISKSLLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKA 72

Query: 244 NLFLAQAIYFG*APAMYAEAKALLCGLQLCVAYGLQPVHVETDSMNLIHFFHSNR 408
              L  A   G A +  AE KAL  GL+L +  G + V VE D+  L+     NR
Sbjct: 73  QFLLGYAESIGRAYSSMAELKALTKGLELVLENGWKDVWVEGDAKGLVEILAENR 127



 Score = 22.7 bits (47), Expect(2) = 2e-07
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 470 LYHEGNSVVDYFATL 514
           +Y EGN V D FA++
Sbjct: 156 IYREGNKVADRFASI 170


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 37/98 (37%), Positives = 51/98 (52%)
 Frame = +1

Query: 166 KLNVDGSSLGNPGQAGGGIAIRDTGGNLFLAQAIYFG*APAMYAEAKALLCGLQLCVAYG 345
           KLNVDG S GNPG AG G  IRD  G      A   G   ++ AE  A+  GLQL    G
Sbjct: 85  KLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144

Query: 346 LQPVHVETDSMNLIHFFHSNRAWPWRIYSILASVKPLL 459
            + V +E+DS  ++   + +     R Y+I+  +K +L
Sbjct: 145 FRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGML 182


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 37/98 (37%), Positives = 51/98 (52%)
 Frame = +1

Query: 166 KLNVDGSSLGNPGQAGGGIAIRDTGGNLFLAQAIYFG*APAMYAEAKALLCGLQLCVAYG 345
           KLNVDG S GNPG AG G  IRD  G      A   G   ++ AE  A+  GLQL    G
Sbjct: 85  KLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144

Query: 346 LQPVHVETDSMNLIHFFHSNRAWPWRIYSILASVKPLL 459
            + V +E+DS  ++   + +     R Y+I+  +K +L
Sbjct: 145 FRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGML 182


>ref|NP_001045287.1| Os01g0930300 [Oryza sativa Japonica Group]
           gi|113534818|dbj|BAF07201.1| Os01g0930300 [Oryza sativa
           Japonica Group]
          Length = 322

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
 Frame = +1

Query: 151 PHVPW-KLNVDGSSLGNPGQAGGGIAIRDTGGNL-FLAQAIYFG*APAMYAEAKALLCGL 324
           P   W KLNVDGS   + G+ G G  +RD+ GNL F A  +    A A+ AE      G+
Sbjct: 167 PQEGWMKLNVDGSYYPSDGKGGTGAVLRDSSGNLIFAACGVLHRPASALEAEMVDCREGI 226

Query: 325 QLCVAYGLQPVHVETDSMNLIHFFHSNRAWPWRIYSILASVKPLLQ 462
            + + + L P+ VETD + ++   HS+      +  ++  VK LL+
Sbjct: 227 SMALQWTLLPIIVETDCLEMVQLIHSDEKAMSDLAFLIREVKLLLK 272


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