BLASTX nr result

ID: Cephaelis21_contig00009801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009801
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134505.1| PREDICTED: psbB mRNA maturation factor Mbb1,...   161   2e-38
ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1,...   154   3e-38
ref|XP_004165485.1| PREDICTED: psbB mRNA maturation factor Mbb1,...   160   4e-38
emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]   154   4e-37
ref|XP_002316041.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-35

>ref|XP_004134505.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
           [Cucumis sativus]
          Length = 636

 Score =  161 bits (408), Expect(2) = 2e-38
 Identities = 84/136 (61%), Positives = 100/136 (73%), Gaps = 6/136 (4%)
 Frame = +1

Query: 1   QAWGVLEQRLGNXXXXXXXXXXXXIINSQSYITWMTWASLEEDQGNAIRADEIRNLYFQQ 180
           QAWGVLEQR+GN             INSQSY+TWMTWA+LEEDQGNAIRA+EIRNLYFQQ
Sbjct: 450 QAWGVLEQRVGNLSAARRLYRSSLNINSQSYVTWMTWAALEEDQGNAIRAEEIRNLYFQQ 509

Query: 181 RIEVVDDASWAMGFLDIIDPAIDSIKKLLNLDQNP-TGSPGAENG---TRVEESAGQQGA 348
           R EVVDDASW MGFLD+IDPA+DSIK+LL L+Q+P T S  A+ G   T +++SA    +
Sbjct: 510 RTEVVDDASWVMGFLDVIDPALDSIKRLLKLEQDPFTASRTADGGPRNTSIDDSAASSSS 569

Query: 349 EDGGGS--SFDLDKFV 390
            + G S   FDLD F+
Sbjct: 570 NNVGESETGFDLDAFI 585



 Score = 23.9 bits (50), Expect(2) = 2e-38
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 468 FVREMFGLDPSKLDVQMKTLK 530
           F+ +   +D SKL++QM+T +
Sbjct: 584 FIMKKLSIDTSKLEIQMETTR 604


>ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic [Vitis
           vinifera] gi|296083248|emb|CBI22884.3| unnamed protein
           product [Vitis vinifera]
          Length = 651

 Score =  154 bits (388), Expect(2) = 3e-38
 Identities = 85/144 (59%), Positives = 99/144 (68%), Gaps = 12/144 (8%)
 Frame = +1

Query: 1   QAWGVLEQRLGNXXXXXXXXXXXXIINSQSYITWMTWASLEEDQGNAIRADEIRNLYFQQ 180
           QAWGVLE+R GN             INSQSYITWMTWAS EE+QGNA+RA+EIR+LYFQQ
Sbjct: 459 QAWGVLEERAGNLSAARRLFRSSLNINSQSYITWMTWASFEENQGNAVRAEEIRDLYFQQ 518

Query: 181 RIEVVDDASWAMGFLDIIDPAIDSIKKLLNLDQN-----PTGS---PGA---ENGTRVEE 327
           R EVVDDASW MGFLDIIDPA+DSIK+LLNLDQN     P  S   PGA    +G     
Sbjct: 519 RTEVVDDASWVMGFLDIIDPALDSIKRLLNLDQNSYYRIPDSSRNIPGANEDSSGPGPGP 578

Query: 328 SAGQQGAED-GGGSSFDLDKFVRE 396
           S+G   ++D    + F+LD F+RE
Sbjct: 579 SSGNPDSKDTASENGFNLDAFIRE 602



 Score = 31.2 bits (69), Expect(2) = 3e-38
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 468 FVREMFGLDPSKLDVQMKT 524
           F+RE   LDPS LDVQM+T
Sbjct: 599 FIREKLSLDPSNLDVQMQT 617


>ref|XP_004165485.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
           [Cucumis sativus]
          Length = 636

 Score =  160 bits (406), Expect(2) = 4e-38
 Identities = 84/136 (61%), Positives = 99/136 (72%), Gaps = 6/136 (4%)
 Frame = +1

Query: 1   QAWGVLEQRLGNXXXXXXXXXXXXIINSQSYITWMTWASLEEDQGNAIRADEIRNLYFQQ 180
           QAWGVLEQR GN             INSQSY+TWMTWA+LEEDQGNAIRA+EIRNLYFQQ
Sbjct: 450 QAWGVLEQRAGNLSAARRLYRSSLNINSQSYVTWMTWAALEEDQGNAIRAEEIRNLYFQQ 509

Query: 181 RIEVVDDASWAMGFLDIIDPAIDSIKKLLNLDQNP-TGSPGAENG---TRVEESAGQQGA 348
           R EVVDDASW MGFLD+IDPA+DSIK+LL L+Q+P T S  A+ G   T +++SA    +
Sbjct: 510 RTEVVDDASWVMGFLDVIDPALDSIKRLLKLEQDPFTASRTADGGPRNTSIDDSAASSSS 569

Query: 349 EDGGGS--SFDLDKFV 390
            + G S   FDLD F+
Sbjct: 570 NNVGESETGFDLDAFI 585



 Score = 23.9 bits (50), Expect(2) = 4e-38
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 468 FVREMFGLDPSKLDVQMKTLK 530
           F+ +   +D SKL++QM+T +
Sbjct: 584 FIMKKLSIDTSKLEIQMETTR 604


>emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]
          Length = 629

 Score =  154 bits (389), Expect(2) = 4e-37
 Identities = 85/144 (59%), Positives = 99/144 (68%), Gaps = 12/144 (8%)
 Frame = +1

Query: 1   QAWGVLEQRLGNXXXXXXXXXXXXIINSQSYITWMTWASLEEDQGNAIRADEIRNLYFQQ 180
           QAWGVLE+R GN             INSQSYITWMTWAS EE+QGNA+RA+EIR+LYFQQ
Sbjct: 459 QAWGVLEERAGNLSAARRLFRSSLNINSQSYITWMTWASFEENQGNAVRAEEIRDLYFQQ 518

Query: 181 RIEVVDDASWAMGFLDIIDPAIDSIKKLLNLDQN-----PTGS---PGAE---NGTRVEE 327
           R EVVDDASW MGFLDIIDPA+DSIK+LLNLDQN     P  S   PGA+   +G     
Sbjct: 519 RTEVVDDASWVMGFLDIIDPALDSIKRLLNLDQNSYYRIPDSSRNIPGADEDSSGPGPGP 578

Query: 328 SAGQQGAED-GGGSSFDLDKFVRE 396
           S+G   + D    + F+LD F+RE
Sbjct: 579 SSGNPDSNDTASENGFNLDAFIRE 602



 Score = 26.9 bits (58), Expect(2) = 4e-37
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 468 FVREMFGLDPSKLDVQMKTLKNI 536
           F+RE   LDPS LD++ K   N+
Sbjct: 599 FIREKLSLDPSNLDMRKKEWMNM 621


>ref|XP_002316041.1| predicted protein [Populus trichocarpa] gi|222865081|gb|EEF02212.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  154 bits (388), Expect = 3e-35
 Identities = 81/147 (55%), Positives = 96/147 (65%), Gaps = 15/147 (10%)
 Frame = +1

Query: 1   QAWGVLEQRLGNXXXXXXXXXXXXIINSQSYITWMTWASLEEDQGNAIRADEIRNLYFQQ 180
           QAWGVLEQR GN             INSQSY+TWMTWA LE+DQGN++RA+EIRNLYFQQ
Sbjct: 386 QAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTWMTWAQLEDDQGNSVRAEEIRNLYFQQ 445

Query: 181 RIEVVDDASWAMGFLDIIDPAIDSIKKLLNLDQNP---------TGSPGAENGTRVEESA 333
           R EVVDD  W  GFLDI+DPA+DSIKKLLN+DQ+P           S G E G   + SA
Sbjct: 446 RTEVVDDVPWVAGFLDILDPAVDSIKKLLNMDQDPYKKAQEALRNISRGKEKGVD-DNSA 504

Query: 334 GQQGA------EDGGGSSFDLDKFVRE 396
           G   +      ++G GS  DLD F++E
Sbjct: 505 GNPSSNSFGNDKEGRGSGLDLDSFIKE 531


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