BLASTX nr result

ID: Cephaelis21_contig00009792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009792
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   227   2e-57
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   216   5e-54
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   194   3e-47
ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798...   173   4e-41
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...   162   1e-37

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score =  227 bits (579), Expect = 2e-57
 Identities = 111/153 (72%), Positives = 134/153 (87%)
 Frame = -2

Query: 461 LMYKNRLQQYTQKNSLQLPVYHTVNEGAQHAPKFRSTVLVDGASYTSQETFVHQKGAEQD 282
           LM+KNRLQ+YTQ++++ LP+Y TVNEG QHAPKFRSTVLVDGA+YTS  TF H+K AEQD
Sbjct: 21  LMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPNTFSHRKAAEQD 80

Query: 281 AARIALENIHQKLKDEGYAIILKDTMFCKSILSEYAMKMHLDKPSYQTIQPEGLLSVFVS 102
            AR+ALE I +K+KDEG  +I +DT+FCKSIL+E+A+KM+L+KP+Y T+QPEGLL VFVS
Sbjct: 81  VARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVS 140

Query: 101 SLNFNGVSYKGDKGRNKKEAEQLAARAVILSIL 3
           SL FNGV+Y GD GRNKKEAEQLAAR VILSIL
Sbjct: 141 SLVFNGVTYTGDAGRNKKEAEQLAARTVILSIL 173


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  216 bits (550), Expect = 5e-54
 Identities = 113/195 (57%), Positives = 146/195 (74%), Gaps = 5/195 (2%)
 Frame = -2

Query: 572 PEPPAQSSNSPIHADHTPSPTL-----LGKKRKRRTVVVLDCLMYKNRLQQYTQKNSLQL 408
           P P   S+ SP  A  T + T      +   +K     + D LMYKNRLQ+YTQK+SLQL
Sbjct: 96  PAPAPDSTLSPSPAASTTTLTSRVSENISFSKKLVKKGLPDNLMYKNRLQEYTQKSSLQL 155

Query: 407 PVYHTVNEGAQHAPKFRSTVLVDGASYTSQETFVHQKGAEQDAARIALENIHQKLKDEGY 228
           PVY T+NEG  H P+FRSTV VDGA Y SQ+TF+H+K AEQD A +ALE+I +++KDEG 
Sbjct: 156 PVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKAAEQDVANLALESILKRVKDEGC 215

Query: 227 AIILKDTMFCKSILSEYAMKMHLDKPSYQTIQPEGLLSVFVSSLNFNGVSYKGDKGRNKK 48
            ++L DT+FCKSIL+E+A+K++ +KP+Y T+Q  GLL VF+S+L F+GVSY GD GRNKK
Sbjct: 216 PLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVFISTLVFDGVSYTGDAGRNKK 275

Query: 47  EAEQLAARAVILSIL 3
           EAEQLAARAVILS++
Sbjct: 276 EAEQLAARAVILSLI 290


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score =  194 bits (492), Expect = 3e-47
 Identities = 98/155 (63%), Positives = 119/155 (76%), Gaps = 2/155 (1%)
 Frame = -2

Query: 461 LMYKNRLQQYTQKNSLQLPVYHTVNEGAQHAPKFRSTVLVDGASYTSQETFVHQKGAEQD 282
           LMYKNRLQ+YTQ+ SLQLP+Y TVNEG  H PKFRSTVLVDG  YTS  TF H+K AEQD
Sbjct: 12  LMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEAEQD 71

Query: 281 AARIALENIHQKLKDE--GYAIILKDTMFCKSILSEYAMKMHLDKPSYQTIQPEGLLSVF 108
            A++AL +I +K+KDE        +DT+ CKSIL+EYA+KM L+ P+Y T++  GL  +F
Sbjct: 72  VAKLALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGGLFPIF 131

Query: 107 VSSLNFNGVSYKGDKGRNKKEAEQLAARAVILSIL 3
           VSS  FNGV+Y GD GR KKEAEQLAARA +LS+L
Sbjct: 132 VSSSVFNGVTYNGDIGRTKKEAEQLAARAAVLSLL 166


>ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798730 [Glycine max]
          Length = 434

 Score =  173 bits (439), Expect = 4e-41
 Identities = 84/154 (54%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
 Frame = -2

Query: 458 MYKNRLQQYTQKNSLQLPVYHTVNEGAQHAPKFRSTVLVDGASYTSQETFVHQKGAEQDA 279
           MYKNRLQ++T K+ +  PVY T+NEG  H+PKFRSTV V    YTSQ TF H+K AE +A
Sbjct: 1   MYKNRLQEFTSKSGINFPVYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEHEA 60

Query: 278 ARIALENIHQKLKDEGYAIILKDTMFCKSILSEYAMKMHLDKPSYQTIQPE--GLLSVFV 105
           AR+ALE+I ++ +DEG +++ + + F KSI++EYA K+H+++P+Y T Q +  G+L +F+
Sbjct: 61  ARLALESILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPIFI 120

Query: 104 SSLNFNGVSYKGDKGRNKKEAEQLAARAVILSIL 3
           +SL FNG SY GD  R KKEAEQ AA+A ILSI+
Sbjct: 121 TSLVFNGTSYTGDPARTKKEAEQSAAKAAILSIM 154


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  162 bits (409), Expect = 1e-37
 Identities = 80/151 (52%), Positives = 107/151 (70%)
 Frame = -2

Query: 458 MYKNRLQQYTQKNSLQLPVYHTVNEGAQHAPKFRSTVLVDGASYTSQETFVHQKGAEQDA 279
           +YKN L +YTQK  + +PVY T++EG+   PK+RSTV+VD   Y S  TF +++ AEQDA
Sbjct: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136

Query: 278 ARIALENIHQKLKDEGYAIILKDTMFCKSILSEYAMKMHLDKPSYQTIQPEGLLSVFVSS 99
           AR+A E I +K KD+ + ++ +D M CKSILSEY  KM L++P Y T   +G ++ F S+
Sbjct: 137 ARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQST 196

Query: 98  LNFNGVSYKGDKGRNKKEAEQLAARAVILSI 6
           L F+GV Y  D GR KKEAEQLAARA ILS+
Sbjct: 197 LVFDGVVYTSDLGRTKKEAEQLAARAAILSL 227


Top