BLASTX nr result

ID: Cephaelis21_contig00009698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009698
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17281.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm...   102   2e-20
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]   100   1e-19
ref|XP_004139015.1| PREDICTED: small subunit processome componen...    94   1e-17
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni...    93   2e-17

>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/92 (58%), Positives = 69/92 (75%)
 Frame = -3

Query: 277  ALSRFTLANSSGNLSEAITIKIFLPLFFNLLFGVQEGKGENVKSACLEAIASIAGCMNWK 98
            ALSRF  A +   L E IT K+F+PLF N+LF VQ+GKGE+++SACLE +ASI G + WK
Sbjct: 1583 ALSRFRNAINVEGLPEVITNKVFVPLFLNMLFNVQDGKGEHIRSACLETLASICGHLEWK 1642

Query: 97   ECYKRLMCCFRDLTVKRERQKSLLRLISSMLD 2
              Y  LM CFR++TVK ++QK LLRLI S+LD
Sbjct: 1643 SYYALLMRCFREMTVKPDKQKVLLRLICSILD 1674


>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
            gi|223542637|gb|EEF44174.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2535

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/92 (55%), Positives = 65/92 (70%)
 Frame = -3

Query: 277  ALSRFTLANSSGNLSEAITIKIFLPLFFNLLFGVQEGKGENVKSACLEAIASIAGCMNWK 98
            ALSRF+   +  N+SE I  K+F+PLFF +L  VQ GKGEN+KSACLEA+ASIA  M WK
Sbjct: 1503 ALSRFSNVINKTNMSEGIMNKVFVPLFFKMLLDVQGGKGENIKSACLEALASIASQMKWK 1562

Query: 97   ECYKRLMCCFRDLTVKRERQKSLLRLISSMLD 2
              Y  L  CF ++ +  ++QK LLRL+ SMLD
Sbjct: 1563 SYYALLTRCFHEMKMNLDKQKVLLRLVCSMLD 1594


>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
          Length = 2461

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/77 (59%), Positives = 61/77 (79%)
 Frame = -3

Query: 232  EAITIKIFLPLFFNLLFGVQEGKGENVKSACLEAIASIAGCMNWKECYKRLMCCFRDLTV 53
            + IT K+F+PLF N+LF VQ+GKGE+++SACLE +ASI G + WK  Y  LM CFR++TV
Sbjct: 1379 QVITNKVFVPLFLNMLFNVQDGKGEHIRSACLETLASICGHLEWKSYYALLMRCFREMTV 1438

Query: 52   KRERQKSLLRLISSMLD 2
            K ++QK LLRLI S+LD
Sbjct: 1439 KPDKQKVLLRLICSILD 1455


>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
            sativus]
          Length = 2696

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/92 (50%), Positives = 63/92 (68%)
 Frame = -3

Query: 277  ALSRFTLANSSGNLSEAITIKIFLPLFFNLLFGVQEGKGENVKSACLEAIASIAGCMNWK 98
            AL RF     + N+ E IT  +F+PLFFN+LF +QEGK EN++ AC+EA+ASI+G M WK
Sbjct: 1642 ALIRFKNTIPTVNMPEVITKNVFVPLFFNMLFDLQEGKAENIRVACIEALASISGQMEWK 1701

Query: 97   ECYKRLMCCFRDLTVKRERQKSLLRLISSMLD 2
              +  L  C RDLT   +++K L+RLI  +LD
Sbjct: 1702 SYFALLRRCLRDLTKHPDKKKVLMRLICCILD 1733


>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
            homolog, partial [Cucumis sativus]
          Length = 2538

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/92 (50%), Positives = 62/92 (67%)
 Frame = -3

Query: 277  ALSRFTLANSSGNLSEAITIKIFLPLFFNLLFGVQEGKGENVKSACLEAIASIAGCMNWK 98
            AL RF     + N+ E IT  +F+PLFFN+LF +QEGK EN++ AC+EA+ASI+G M WK
Sbjct: 1484 ALIRFKNTIPTVNMPEVITKNVFVPLFFNMLFDLQEGKAENIRVACIEALASISGQMEWK 1543

Query: 97   ECYKRLMCCFRDLTVKRERQKSLLRLISSMLD 2
              +  L  C RDLT   ++ K L+RLI  +LD
Sbjct: 1544 SYFALLRRCLRDLTKHPDKXKVLMRLICCILD 1575


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