BLASTX nr result

ID: Cephaelis21_contig00009680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009680
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    67   2e-09
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   2e-08
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-08
gb|EEC81314.1| hypothetical protein OsI_24468 [Oryza sativa Indi...    60   2e-07
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                60   2e-07

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = +1

Query: 172 LTQSVTDAEIREHMFDIGIDRAPGSDGYTSRFFRRSWNAVSGDVCAAVKEFFFSRWLLKQ 351
           L QSVTD E+R+ +F IG DRAPG DG+T+ F+   W+ +  DVC  V+ FF S  +  Q
Sbjct: 786 LLQSVTDQEVRDAVFAIGADRAPGFDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQ 845

Query: 352 MN 357
           +N
Sbjct: 846 IN 847


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/63 (41%), Positives = 42/63 (66%)
 Frame = +1

Query: 172 LTQSVTDAEIREHMFDIGIDRAPGSDGYTSRFFRRSWNAVSGDVCAAVKEFFFSRWLLKQ 351
           LT +V+  EI+  +FD+  D++PG DG+   FF++ W  +   VC AV+ FF S ++LK+
Sbjct: 440 LTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKE 499

Query: 352 MNH 360
           +NH
Sbjct: 500 VNH 502


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 58.5 bits (140), Expect(2) = 2e-08
 Identities = 28/62 (45%), Positives = 40/62 (64%)
 Frame = +1

Query: 172 LTQSVTDAEIREHMFDIGIDRAPGSDGYTSRFFRRSWNAVSGDVCAAVKEFFFSRWLLKQ 351
           L Q VT  EI+  MF +  ++APG DG+ + FF+R W+ V  DV  AV+  F +R +LK+
Sbjct: 410 LAQVVTRKEIKHAMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTRRMLKE 469

Query: 352 MN 357
           MN
Sbjct: 470 MN 471



 Score = 24.6 bits (52), Expect(2) = 2e-08
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 3   ITSVTREDGSVTGNMEEVA*EFVQYCTGLLRTD 101
           + S+TREDG V    E V  E + Y   +L  D
Sbjct: 351 LLSLTREDGEVVEGHEAVKSEVIAYFHRVLGVD 383


>gb|EEC81314.1| hypothetical protein OsI_24468 [Oryza sativa Indica Group]
          Length = 797

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = +1

Query: 172 LTQSVTDAEIREHMFDIGIDRAPGSDGYTSRFFRRSWNAVSGDVCAAVKEFFFS 333
           L +  TD EI + +F IG  +APG DG+ +RF++R+W  +  DV AAVKEFF S
Sbjct: 621 LCKEFTDEEIADALFQIGPLKAPGPDGFPARFYQRNWATIKSDVVAAVKEFFHS 674


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = +1

Query: 172 LTQSVTDAEIREHMFDIGIDRAPGSDGYTSRFFRRSWNAVSGDVCAAVKEFFFSRWLLKQ 351
           LTQ   D+EI E +  IG D+APG DG T+RF+++ W+ V  DV   VK FF S  +   
Sbjct: 45  LTQDFRDSEIFEAICQIGDDKAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTS 104

Query: 352 MNH 360
           +NH
Sbjct: 105 VNH 107


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