BLASTX nr result

ID: Cephaelis21_contig00009609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009609
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554808.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   195   1e-47
ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   187   2e-45
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ...   186   8e-45
ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicag...   179   1e-42

>ref|XP_003554808.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           46-like [Glycine max]
          Length = 741

 Score =  195 bits (495), Expect = 1e-47
 Identities = 117/195 (60%), Positives = 127/195 (65%), Gaps = 9/195 (4%)
 Frame = +2

Query: 338 MAATATVSA-GIRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVSS----SH 502
           MAATATVS  G RYAP DPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERP SS    S 
Sbjct: 1   MAATATVSLMGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSASQSK 60

Query: 503 FGSAPLHKPLSSSVHVQKSSQGHSESGPKXXXXXXXXXXXXXLVKVSSGVGNSQGTRSGP 682
           F S P     SSSV VQ+SSQG S+ G +                  +G  N+Q ++ G 
Sbjct: 61  FSSVP-----SSSVQVQQSSQG-SQRG-RSPDFSDRYDRNGTGGSNDAGSRNNQSSKGGS 113

Query: 683 DQPRDVPKVAVVAGVAN----GYSAPTVGTTLSAESYRRRHEISVTGENVPPPLTSFDST 850
               DV     VAG  N    G+ A   G  LSAESYR RHEISVTG+NVPPPL SF ST
Sbjct: 114 YTSHDVSNGTNVAGNGNSSVRGHGASDAGAGLSAESYRHRHEISVTGDNVPPPLASFGST 173

Query: 851 GFPSEILREVQNAGF 895
           GFPSE+LREVQNAGF
Sbjct: 174 GFPSELLREVQNAGF 188


>ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Glycine
           max]
          Length = 774

 Score =  187 bits (476), Expect = 2e-45
 Identities = 111/191 (58%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
 Frame = +2

Query: 338 MAATATVSA-GIRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVSSSHFGSA 514
           MAATAT S+ G RYAP DPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERP SSS     
Sbjct: 1   MAATATASSMGPRYAPADPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSTAQPK 60

Query: 515 PLHKPLSSSVHVQKSSQGHSESGPKXXXXXXXXXXXXXLVKVSSGVGNSQGTRSGPDQPR 694
               P +SSV VQ+SSQG S+ G                    +G  N+Q ++ G     
Sbjct: 61  SSSVP-NSSVQVQQSSQG-SQCGHSPDFSDRYDRNGSG-GSNEAGSRNNQSSKGGSYASH 117

Query: 695 DVPKVAVVAG----VANGYSAPTVGTTLSAESYRRRHEISVTGENVPPPLTSFDSTGFPS 862
           DV     VAG       G+ A   G  LS ESYR RHEISVTG+NVPPPL SF STGFPS
Sbjct: 118 DVSNGTHVAGNVDSSVRGHGASDAGAGLSPESYRHRHEISVTGDNVPPPLASFGSTGFPS 177

Query: 863 EILREVQNAGF 895
           E+LREVQNAGF
Sbjct: 178 ELLREVQNAGF 188


>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 781

 Score =  186 bits (471), Expect = 8e-45
 Identities = 107/195 (54%), Positives = 131/195 (67%), Gaps = 9/195 (4%)
 Frame = +2

Query: 338 MAATATVSAGIRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVSSSHFGSAP 517
           MAATAT  AG RYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERP++++    + 
Sbjct: 1   MAATAT--AGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPIATALPSKSS 58

Query: 518 LHKPLSSSVHVQKSS-QGHSESGPKXXXXXXXXXXXXXLVKVSSGVGNSQGTRSGPDQPR 694
           L  P+SSSV VQ+SS +G+S    +               K  +G   +Q  + G  Q +
Sbjct: 59  L-VPISSSVQVQQSSRRGYSPVKEEDRYGRGNGSGS----KPDAGTNFNQNAKGGGFQSQ 113

Query: 695 DVPKVAVVAGVANGYSAPTV--------GTTLSAESYRRRHEISVTGENVPPPLTSFDST 850
           +VP      G ANG   P+         G+ LS E+YRRRHEISVTG++VPPPLT+F++T
Sbjct: 114 NVPN-----GTANGPGGPSARGHGSSAGGSILSPEAYRRRHEISVTGDDVPPPLTTFEAT 168

Query: 851 GFPSEILREVQNAGF 895
           GFPSEILREV +AGF
Sbjct: 169 GFPSEILREVLSAGF 183


>ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|222847303|gb|EEE84850.1|
           predicted protein [Populus trichocarpa]
          Length = 791

 Score =  181 bits (460), Expect = 2e-43
 Identities = 105/194 (54%), Positives = 126/194 (64%), Gaps = 8/194 (4%)
 Frame = +2

Query: 338 MAATATVSA-GIRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVSSSHFGSA 514
           MAATAT S+ G RYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERP       S 
Sbjct: 1   MAATATASSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPTLPKSVSSL 60

Query: 515 PLHKPLSSSVHVQKSS-QGHSESGPKXXXXXXXXXXXXXLVKVSSGVGNS-QGTRSGPDQ 688
               P++SSV V +SS +G++ S  +                V+  + +S Q  R    Q
Sbjct: 61  ----PITSSVQVHQSSHRGYNPSVKEDDRYGRANNAGSKPDAVTRSISSSNQSARGAAIQ 116

Query: 689 PRDVPKVAVVAGVANGYSAPTVGTT-----LSAESYRRRHEISVTGENVPPPLTSFDSTG 853
             +VP      G ANG SA   G++     +S E+YRRRHEI+VTG+ VPPPLTSF++TG
Sbjct: 117 SENVPN-----GTANGLSARVYGSSAGGSGMSGEAYRRRHEITVTGDEVPPPLTSFETTG 171

Query: 854 FPSEILREVQNAGF 895
           FPSEIL+EV NAGF
Sbjct: 172 FPSEILKEVLNAGF 185


>ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 619

 Score =  179 bits (453), Expect = 1e-42
 Identities = 107/200 (53%), Positives = 122/200 (61%), Gaps = 14/200 (7%)
 Frame = +2

Query: 338 MAATATVSAGIRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVSSSHFGSAP 517
           MAATAT + G RYAP DPTLPKPW+GLVDGKTGYLYFWNPETNVTQYERP SS    +AP
Sbjct: 1   MAATATAAVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPSSS----AAP 56

Query: 518 LHKPL--SSSVHVQKSSQGHSESGPKXXXXXXXXXXXXXLVKVSSGVGNSQGTRSGPDQP 691
           L      SSSV VQ+SSQG   S                  +  +G  N  G+R+     
Sbjct: 57  LKTSSVPSSSVQVQQSSQGRGRS----------PDFSDRYDRNGNGGSNEGGSRNHQSSK 106

Query: 692 RDVPKVAVVAGVANGYSAP------------TVGTTLSAESYRRRHEISVTGENVPPPLT 835
            D    +    VANG  A               G  LS ++YRRRHEI+VTG+NVPPP+T
Sbjct: 107 GD--SFSSHNNVANGTPAAGNGSSIKSQVPLETGPALSPDAYRRRHEITVTGDNVPPPVT 164

Query: 836 SFDSTGFPSEILREVQNAGF 895
           SF S+GFPSEILREVQNAGF
Sbjct: 165 SFASSGFPSEILREVQNAGF 184


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