BLASTX nr result

ID: Cephaelis21_contig00009591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009591
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   125   2e-26
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    93   1e-16
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    93   1e-16
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    93   1e-16
ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu...    92   3e-16

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  125 bits (315), Expect = 2e-26
 Identities = 89/307 (28%), Positives = 145/307 (47%), Gaps = 2/307 (0%)
 Frame = -3

Query: 1201 RWNRPLVECMFNPQEAK*ILELPIHWQVGQDKQVWCAETNGIFFVQSSY--QLAYKDKEG 1028
            RWN  L+  +F P E+  I  +P+  Q   D+ +W    NG F V+S+Y  +L    K G
Sbjct: 980  RWNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTG 1039

Query: 1027 AKAIAESSHAREDRGMMWKQLWKLPIKRKLKHFL*KILYGWFPTNTSIKNRGMSVDKICS 848
                   S +R     +W+++WK  I  K+K F  K ++      T+++ RGM++D  C 
Sbjct: 1040 P------STSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACP 1093

Query: 847  RCGLAK*TSEHLFLKCEESALIWKIAPVKWEQCNHLTDSFVDWWRAINRAVKDEHCRKGV 668
            RCG  + T+EHL   C+ES+  W I+P++    N    SF  W  ++    KD    +  
Sbjct: 1094 RCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKD---TEWW 1150

Query: 667  EFTVYLLWHIWKLRNSWHFQQVKGTVEEVVHKAIKDWHEFEEAQIDRLHQTKSGRTSHKE 488
                 + W+IW  RN W F++ K   +EVV +A++   EFEE   +  H +     +  E
Sbjct: 1151 ALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEE---ECAHTSPVETLNTHE 1207

Query: 487  NRIIVAQRAMRICLASETTVEAEGSGIGFVGHSAQDQFLFAHAEYCEHIQNPCLAELEAI 308
            N   V    M          +  G G+G V   A+   L A       +++P +AE  ++
Sbjct: 1208 NGWSVPPVGMVKLNVDAAVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSL 1267

Query: 307  KRALQMA 287
            +  L++A
Sbjct: 1268 RYGLKVA 1274


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
 Frame = -3

Query: 1198 WNRPLVECMFNPQEAK*ILELPIHWQVGQDKQVWCAETNGIFFVQSSYQLAYKD-KEGAK 1022
            WN  L++ +F+P++   I  LPI     +D   W     G + V+S Y  A  D  EG  
Sbjct: 756  WNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTT 815

Query: 1021 AIAESSHAREDRGMMWKQLWKLPIKRKLKHFL*KILYGWFPTNTSIKNRGMSVDKICSRC 842
             I        D   +   +WK+    KL+HFL +IL G  P + +++ RG+  DK C  C
Sbjct: 816  LIGP------DLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSC 869

Query: 841  GLAK*TSEHLFLKCEESALIWKI-----APVKWEQCNHLTDSFVDWWRAINRAVKDEHCR 677
            G ++ +  H   +C  +  IW +     AP  +   +  T+    +WR            
Sbjct: 870  GASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNLDHLFWR----------IP 919

Query: 676  KGVEFTVY--LLWHIWKLRNSWHFQQVKGTVEEVVHKAIKDWHEFEEAQIDRLHQTKSGR 503
             GV+   Y  ++W+IWK RN   F+ V     E++  A+K+   ++EAQ++ LH  + G 
Sbjct: 920  SGVDSAPYPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQEAQVE-LHSERHGS 978

Query: 502  TS 497
             S
Sbjct: 979  LS 980


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 75/314 (23%), Positives = 135/314 (42%), Gaps = 7/314 (2%)
 Frame = -3

Query: 1198 WNRPLVECMFNPQEAK*ILELPIHWQVGQDKQVWCAETNGIFFVQSSYQLAYK-----DK 1034
            W+  L+   F  ++   I  +P+H ++ +D   W  +  G F V+S+Y++  +      +
Sbjct: 167  WDEDLLSQTFWEEDVAAIKSIPVHVEM-EDVLAWHFDARGCFTVKSAYKVQREMERRASR 225

Query: 1033 EGAKAIAESSHAREDRGMMWKQLWKLPIKRKLKHFL*KILYGWFPTNTSIKNRGMSVDKI 854
             G   ++      +D    WK+LWKL +  K+KHFL ++ +       ++++RGM VD  
Sbjct: 226  NGCPGVSNWESGDDD---FWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTR 282

Query: 853  CSRCGLAK*TSEHLFLKCEESALIWKIAPVKWEQCNHLTDSFVDWWRAINRAVKDEHCRK 674
            C  CG     + HLF KC+    +W+   ++  +      S ++   +    ++  +CR 
Sbjct: 283  CVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELR------SMLEQQTSGKNVLQSIYCRP 336

Query: 673  GVEFT--VYLLWHIWKLRNSWHFQQVKGTVEEVVHKAIKDWHEFEEAQIDRLHQTKSGRT 500
             +E T  +  LW  WK RN      +  +  E+ H  +    EF    +    + KS RT
Sbjct: 337  EIERTSAIVCLWQWWKERNEVREGGIPRSPAELSHLIMSQAGEFVRMNV----KEKSPRT 392

Query: 499  SHKENRIIVAQRAMRICLASETTVEAEGSGIGFVGHSAQDQFLFAHAEYCEHIQNPCLAE 320
                         ++I      +   +  G GFV        L A A    ++Q+   AE
Sbjct: 393  GECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAE 452

Query: 319  LEAIKRALQMASRR 278
            + A   A++ AS R
Sbjct: 453  VVACAAAIKTASER 466


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 75/314 (23%), Positives = 135/314 (42%), Gaps = 7/314 (2%)
 Frame = -3

Query: 1198 WNRPLVECMFNPQEAK*ILELPIHWQVGQDKQVWCAETNGIFFVQSSYQLAYK-----DK 1034
            W+  L+   F  ++   I  +P+H ++ +D   W  +  G F V+S+Y++  +      +
Sbjct: 1200 WDEDLLSQTFWEEDVAAIKSIPVHVEM-EDVLAWHFDARGCFTVKSAYKVQREMERRASR 1258

Query: 1033 EGAKAIAESSHAREDRGMMWKQLWKLPIKRKLKHFL*KILYGWFPTNTSIKNRGMSVDKI 854
             G   ++      +D    WK+LWKL +  K+KHFL ++ +       ++++RGM VD  
Sbjct: 1259 NGCPGVSNWESGDDD---FWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTR 1315

Query: 853  CSRCGLAK*TSEHLFLKCEESALIWKIAPVKWEQCNHLTDSFVDWWRAINRAVKDEHCRK 674
            C  CG     + HLF KC+    +W+   ++  +      S ++   +    ++  +CR 
Sbjct: 1316 CVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELR------SMLEQQTSGKNVLQSIYCRP 1369

Query: 673  GVEFT--VYLLWHIWKLRNSWHFQQVKGTVEEVVHKAIKDWHEFEEAQIDRLHQTKSGRT 500
             +E T  +  LW  WK RN      +  +  E+ H  +    EF    +    + KS RT
Sbjct: 1370 EIERTSAIVCLWQWWKERNEVREGGIPRSPAELSHLIMSQAGEFVRMNV----KEKSPRT 1425

Query: 499  SHKENRIIVAQRAMRICLASETTVEAEGSGIGFVGHSAQDQFLFAHAEYCEHIQNPCLAE 320
                         ++I      +   +  G GFV        L A A    ++Q+   AE
Sbjct: 1426 GECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAE 1485

Query: 319  LEAIKRALQMASRR 278
            + A   A++ AS R
Sbjct: 1486 VVACAAAIKTASER 1499


>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
            gi|223537282|gb|EEF38913.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 446

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 58/222 (26%), Positives = 103/222 (46%)
 Frame = -3

Query: 1198 WNRPLVECMFNPQEAK*ILELPIHWQVGQDKQVWCAETNGIFFVQSSYQLAYKDKEGAKA 1019
            WN  LV   F+ Q+A+ IL++    +   D + W    +GIF  +S+Y +A+        
Sbjct: 57   WNCNLVRACFSQQDAEAILQIKPSHRKSPDVRYWVHSNSGIFSSRSTYYIAWNSLLNFTP 116

Query: 1018 IAESSHAREDRGMMWKQLWKLPIKRKLKHFL*KILYGWFPTNTSIKNRGMSVDKICSRCG 839
               +SH       +  + W+L I   +KHF+ ++ +   P   ++KNR + + +ICSRCG
Sbjct: 117  -PSTSHGTAP---VVNKCWRLNILHGVKHFMWRLNHNLLPCIENLKNRKIDMGEICSRCG 172

Query: 838  LAK*TSEHLFLKCEESALIWKIAPVKWEQCNHLTDSFVDWWRAINRAVKDEHCRKGVEFT 659
                T  ++F KC+     W   P+       + +   +W   I+    D+     +E  
Sbjct: 173  GCVETQTYVFKKCQFVRSFWLTYPLGLRVDTIVVEDLKNWVNQIHSVGDDDF----IEKF 228

Query: 658  VYLLWHIWKLRNSWHFQQVKGTVEEVVHKAIKDWHEFEEAQI 533
              LLW  W LRN + F++ +  V   V +A+   H F+ + +
Sbjct: 229  AMLLWCYWNLRNKFIFERKEEDVVTTVQRALVFLHGFQTSNV 270


Top