BLASTX nr result

ID: Cephaelis21_contig00009522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009522
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   396   e-139
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              396   e-137
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...   378   e-132
ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6...   385   e-131
ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl...   385   e-131

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
            vinifera]
          Length = 610

 Score =  396 bits (1017), Expect(2) = e-139
 Identities = 202/239 (84%), Positives = 219/239 (91%)
 Frame = +2

Query: 407  QIELEDPLENVGVKLVRQAGAKTNELAGDGCTTSVVLAQGLISEGMKVVAAGMNPTQISR 586
            +IELEDPLENVGVKLVRQAGAKTN LAGDG TTSV+LA+GLI+EG+KV+AAGMNP QISR
Sbjct: 86   EIELEDPLENVGVKLVRQAGAKTNHLAGDGSTTSVILARGLIAEGVKVIAAGMNPIQISR 145

Query: 587  GIDKTTKALVSELKHMSREVEDHELADVAAVSAGNDYAMGNMISDAFRQVGRKGVITIQK 766
            GI+KT  ALVSELK MSREVEDHELA VAAVSAGNDY +GNMISDA RQVGR+GVITI+K
Sbjct: 146  GIEKTAMALVSELKLMSREVEDHELAHVAAVSAGNDYTVGNMISDAIRQVGRRGVITIEK 205

Query: 767  GNHAENSLHVVEGMQFDRGYLSPYFVTDRQQMIVQFHDCKLLLVDKIITNAKEMLKILDN 946
            G  AENSL +VEGMQFDRGYLSPYFVTDRQ+M+V+FHDCKLLLVDK ITN KEM KILDN
Sbjct: 206  GKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNPKEMFKILDN 265

Query: 947  AVKENYPIVIVAEGIEQEALAPVIRNKLKGTLKAAAIKAPAFNERKSHNLDDIATMTGG 1123
            AVKE YPIVIVAEGIEQEALAPVIRNKL+G LKAAAIKAPAF ERKSH LDD+A +TGG
Sbjct: 266  AVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDLAILTGG 324



 Score =  125 bits (315), Expect(2) = e-139
 Identities = 63/72 (87%), Positives = 65/72 (90%)
 Frame = +1

Query: 187 RGPSCSMLNTRAMAKELYFNHDGSAMKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPP 366
           R  S +  N RAMAKELYFNHDGSA KKLQAGVD+VAELVGVTLGPKGRNVVLQNKYGPP
Sbjct: 15  RSFSTTAWNPRAMAKELYFNHDGSATKKLQAGVDMVAELVGVTLGPKGRNVVLQNKYGPP 74

Query: 367 KIVNDGETVLKE 402
           KIVNDGETVLKE
Sbjct: 75  KIVNDGETVLKE 86


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  396 bits (1017), Expect(2) = e-137
 Identities = 202/239 (84%), Positives = 219/239 (91%)
 Frame = +2

Query: 407  QIELEDPLENVGVKLVRQAGAKTNELAGDGCTTSVVLAQGLISEGMKVVAAGMNPTQISR 586
            +IELEDPLENVGVKLVRQAGAKTN LAGDG TTSV+LA+GLI+EG+KV+AAGMNP QISR
Sbjct: 60   EIELEDPLENVGVKLVRQAGAKTNHLAGDGSTTSVILARGLIAEGVKVIAAGMNPIQISR 119

Query: 587  GIDKTTKALVSELKHMSREVEDHELADVAAVSAGNDYAMGNMISDAFRQVGRKGVITIQK 766
            GI+KT  ALVSELK MSREVEDHELA VAAVSAGNDY +GNMISDA RQVGR+GVITI+K
Sbjct: 120  GIEKTAMALVSELKLMSREVEDHELAHVAAVSAGNDYTVGNMISDAIRQVGRRGVITIEK 179

Query: 767  GNHAENSLHVVEGMQFDRGYLSPYFVTDRQQMIVQFHDCKLLLVDKIITNAKEMLKILDN 946
            G  AENSL +VEGMQFDRGYLSPYFVTDRQ+M+V+FHDCKLLLVDK ITN KEM KILDN
Sbjct: 180  GKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNPKEMFKILDN 239

Query: 947  AVKENYPIVIVAEGIEQEALAPVIRNKLKGTLKAAAIKAPAFNERKSHNLDDIATMTGG 1123
            AVKE YPIVIVAEGIEQEALAPVIRNKL+G LKAAAIKAPAF ERKSH LDD+A +TGG
Sbjct: 240  AVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDLAILTGG 298



 Score =  119 bits (299), Expect(2) = e-137
 Identities = 58/60 (96%), Positives = 59/60 (98%)
 Frame = +1

Query: 223 MAKELYFNHDGSAMKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKE 402
           MAKELYFNHDGSA KKLQAGVD+VAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKE
Sbjct: 1   MAKELYFNHDGSATKKLQAGVDMVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKE 60


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus
            communis] gi|223546152|gb|EEF47654.1| rubisco subunit
            binding-protein beta subunit, rubb, putative [Ricinus
            communis]
          Length = 592

 Score =  378 bits (970), Expect(2) = e-132
 Identities = 189/238 (79%), Positives = 216/238 (90%)
 Frame = +2

Query: 407  QIELEDPLENVGVKLVRQAGAKTNELAGDGCTTSVVLAQGLISEGMKVVAAGMNPTQISR 586
            QIELEDPLENVGVKLVRQAGAKTN+LAGDG TTSVVLA GLI+EG+KV+AAGMNP Q++R
Sbjct: 95   QIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSVVLAHGLIAEGVKVIAAGMNPVQVAR 154

Query: 587  GIDKTTKALVSELKHMSREVEDHELADVAAVSAGNDYAMGNMISDAFRQVGRKGVITIQK 766
            GI++T+KALVSELK MSREVED E+A VAAVSAGNDYA+G MISDA R+VG++GV+TI K
Sbjct: 155  GIERTSKALVSELKLMSREVEDDEIAAVAAVSAGNDYAVGKMISDALREVGKRGVVTIDK 214

Query: 767  GNHAENSLHVVEGMQFDRGYLSPYFVTDRQQMIVQFHDCKLLLVDKIITNAKEMLKILDN 946
            G + +N+L +V+GMQFDRGYLSPYFVTDR++M V+FH+CKLLLVDK ITN KEM KILDN
Sbjct: 215  GEYIDNNLQIVKGMQFDRGYLSPYFVTDRRKMTVEFHNCKLLLVDKKITNPKEMFKILDN 274

Query: 947  AVKENYPIVIVAEGIEQEALAPVIRNKLKGTLKAAAIKAPAFNERKSHNLDDIATMTG 1120
            AVKE YPIV+VAEGIEQEALAPVIRNKL+G LKAAAIKAPAF ERK H LDDIA +TG
Sbjct: 275  AVKEKYPIVVVAEGIEQEALAPVIRNKLRGALKAAAIKAPAFGERKGHYLDDIAILTG 332



 Score =  120 bits (302), Expect(2) = e-132
 Identities = 60/89 (67%), Positives = 72/89 (80%)
 Frame = +1

Query: 136 PIQSMSLSKPYIKNSITRGPSCSMLNTRAMAKELYFNHDGSAMKKLQAGVDLVAELVGVT 315
           PI ++S +       ++  PS SML  +AM+K++YFNHDGSA KKL AGV +VAELVGVT
Sbjct: 8   PISAISFTNQTFPKRVS-SPSSSMLYLKAMSKDIYFNHDGSATKKLLAGVGMVAELVGVT 66

Query: 316 LGPKGRNVVLQNKYGPPKIVNDGETVLKE 402
           LGPKGRNVVL+NKYGPPKIVNDGETVLK+
Sbjct: 67  LGPKGRNVVLENKYGPPKIVNDGETVLKQ 95


>ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4,
            chloroplastic-like [Cucumis sativus]
          Length = 597

 Score =  385 bits (989), Expect(2) = e-131
 Identities = 193/238 (81%), Positives = 219/238 (92%)
 Frame = +2

Query: 407  QIELEDPLENVGVKLVRQAGAKTNELAGDGCTTSVVLAQGLISEGMKVVAAGMNPTQISR 586
            +IELEDPLENVGVKLVRQAGAKTN+LAGDG TTSVVLAQGLI+EGMKV+A+GMNP QI+R
Sbjct: 107  EIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSVVLAQGLIAEGMKVIASGMNPVQIAR 166

Query: 587  GIDKTTKALVSELKHMSREVEDHELADVAAVSAGNDYAMGNMISDAFRQVGRKGVITIQK 766
            GI+KT KALVSELK MSREVEDHE+A VAAVSAGNDYA+G+++SDAFRQVG KGV+ I+K
Sbjct: 167  GIEKTAKALVSELKLMSREVEDHEIAHVAAVSAGNDYAVGSLVSDAFRQVGWKGVVQIEK 226

Query: 767  GNHAENSLHVVEGMQFDRGYLSPYFVTDRQQMIVQFHDCKLLLVDKIITNAKEMLKILDN 946
            G   +NSL +VEGMQFDRGYLSPYFVTDR++M+V+FH+CKLLLVDK I++ KEM KILDN
Sbjct: 227  GKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDPKEMFKILDN 286

Query: 947  AVKENYPIVIVAEGIEQEALAPVIRNKLKGTLKAAAIKAPAFNERKSHNLDDIATMTG 1120
            AVKE YPIVI+AEGIE EALAPVIRNKL+G LKAAAIKAPAF ERKSH LDDIAT+TG
Sbjct: 287  AVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDIATLTG 344



 Score =  111 bits (278), Expect(2) = e-131
 Identities = 63/108 (58%), Positives = 70/108 (64%), Gaps = 13/108 (12%)
 Frame = +1

Query: 118 MGCSLYPIQSMSLSKPYIKNSITRGPSCSMLNT-------------RAMAKELYFNHDGS 258
           M  S  PI  +S + P I  S T+  S    N              +   K+LYFNHDGS
Sbjct: 1   MASSPTPISPLSFTNP-ISTSRTKPKSLPFPNKPPSSLPPALNSTPKPPPKDLYFNHDGS 59

Query: 259 AMKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKE 402
             KKLQ GV+LVAELVG+TLGPKGRNVVLQNKYGPPKIVNDGETVLKE
Sbjct: 60  TFKKLQVGVNLVAELVGITLGPKGRNVVLQNKYGPPKIVNDGETVLKE 107


>ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Cucumis
            sativus]
          Length = 597

 Score =  385 bits (989), Expect(2) = e-131
 Identities = 193/238 (81%), Positives = 219/238 (92%)
 Frame = +2

Query: 407  QIELEDPLENVGVKLVRQAGAKTNELAGDGCTTSVVLAQGLISEGMKVVAAGMNPTQISR 586
            +IELEDPLENVGVKLVRQAGAKTN+LAGDG TTSVVLAQGLI+EGMKV+A+GMNP QI+R
Sbjct: 107  EIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSVVLAQGLIAEGMKVIASGMNPVQIAR 166

Query: 587  GIDKTTKALVSELKHMSREVEDHELADVAAVSAGNDYAMGNMISDAFRQVGRKGVITIQK 766
            GI+KT KALVSELK MSREVEDHE+A VAAVSAGNDYA+G+++SDAFRQVG KGV+ I+K
Sbjct: 167  GIEKTAKALVSELKLMSREVEDHEIAHVAAVSAGNDYAVGSLVSDAFRQVGWKGVVQIEK 226

Query: 767  GNHAENSLHVVEGMQFDRGYLSPYFVTDRQQMIVQFHDCKLLLVDKIITNAKEMLKILDN 946
            G   +NSL +VEGMQFDRGYLSPYFVTDR++M+V+FH+CKLLLVDK I++ KEM KILDN
Sbjct: 227  GKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDPKEMFKILDN 286

Query: 947  AVKENYPIVIVAEGIEQEALAPVIRNKLKGTLKAAAIKAPAFNERKSHNLDDIATMTG 1120
            AVKE YPIVI+AEGIE EALAPVIRNKL+G LKAAAIKAPAF ERKSH LDDIAT+TG
Sbjct: 287  AVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDIATLTG 344



 Score =  111 bits (278), Expect(2) = e-131
 Identities = 63/108 (58%), Positives = 70/108 (64%), Gaps = 13/108 (12%)
 Frame = +1

Query: 118 MGCSLYPIQSMSLSKPYIKNSITRGPSCSMLNT-------------RAMAKELYFNHDGS 258
           M  S  PI  +S + P I  S T+  S    N              +   K+LYFNHDGS
Sbjct: 1   MASSPTPISPLSFTNP-ISTSRTKPKSLPFPNKPPSSLPPALNSTPKPPPKDLYFNHDGS 59

Query: 259 AMKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKE 402
             KKLQ GV+LVAELVG+TLGPKGRNVVLQNKYGPPKIVNDGETVLKE
Sbjct: 60  TFKKLQVGVNLVAELVGITLGPKGRNVVLQNKYGPPKIVNDGETVLKE 107


Top