BLASTX nr result

ID: Cephaelis21_contig00008988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008988
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|1...   286   5e-75
ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-contai...   286   7e-75
ref|XP_002882543.1| hypothetical protein ARALYDRAFT_478100 [Arab...   283   6e-74
gb|AAM66112.1| putative coated vesicle membrane protein [Arabido...   282   9e-74
ref|NP_187425.1| emp24/gp25L/p24 family/GOLD domain-containing p...   281   1e-73

>ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|118482006|gb|ABK92934.1|
           unknown [Populus trichocarpa]
           gi|222847640|gb|EEE85187.1| predicted protein [Populus
           trichocarpa]
          Length = 213

 Score =  286 bits (732), Expect = 5e-75
 Identities = 140/197 (71%), Positives = 162/197 (82%), Gaps = 1/197 (0%)
 Frame = +1

Query: 238 IISSLGGSFGIRFVIDREECFSHKVEY-GATVHFSFVVIKSEGAWNFNHDGVDLVVKGPT 414
           ++SS    FGIRFVIDREECFSH V+Y G TVH SFVV+K + +W+++ DGVDLVVKGP+
Sbjct: 17  LLSSPEAVFGIRFVIDREECFSHDVKYEGDTVHVSFVVVKVDSSWHYSDDGVDLVVKGPS 76

Query: 415 GEQIHDFRDKISEKAEFAAYQEGVYRFCFTSNSPYHETIDFDXXXXXXXXXXXXXKDEHF 594
           G+QIHDFRDKISEK EF A+Q+GV+RFCFT+ SPYHETIDFD             KDEHF
Sbjct: 77  GDQIHDFRDKISEKIEFVAHQKGVHRFCFTNKSPYHETIDFDVHVGHFSYYDEHAKDEHF 136

Query: 595 QPLFEHISKLEEALYNIQFEQHWLEAQTERQAIVNEGMRKRVMHKALYESAALVGASILQ 774
           QPL E ISKLEEALYNIQFEQHWLEAQT+RQAI+N+ M +R +HKA +ESAALV ASILQ
Sbjct: 137 QPLLEQISKLEEALYNIQFEQHWLEAQTDRQAIINDAMSRRTIHKAFFESAALVAASILQ 196

Query: 775 VYLLRRLFDRKLGTSRV 825
           VYLLRRLF+RKLG SRV
Sbjct: 197 VYLLRRLFERKLGMSRV 213


>ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-containing protein
           p24beta2-like [Cucumis sativus]
          Length = 214

 Score =  286 bits (731), Expect = 7e-75
 Identities = 141/205 (68%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
 Frame = +1

Query: 214 MWWAVSAVIISSLGGSFGIRFVIDREECFSHKVEY-GATVHFSFVVIKSEGAWNFNHDGV 390
           M  A   V++ SL  S GIRFVIDREECFSH V+Y G TVH SFVVIK++  W++  DGV
Sbjct: 10  MMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADSPWHYGDDGV 69

Query: 391 DLVVKGPTGEQIHDFRDKISEKAEFAAYQEGVYRFCFTSNSPYHETIDFDXXXXXXXXXX 570
           DLV+KGP+GE +HDFRDK SEK EF A+ +G++RFCFT+ SPYHETIDFD          
Sbjct: 70  DLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHE 129

Query: 571 XXXKDEHFQPLFEHISKLEEALYNIQFEQHWLEAQTERQAIVNEGMRKRVMHKALYESAA 750
              KDEHF PL + ISKLEEALYNIQFEQHWLEAQT+RQAIVNEGM KR +HKA++ESAA
Sbjct: 130 QHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAIHKAMFESAA 189

Query: 751 LVGASILQVYLLRRLFDRKLGTSRV 825
           LVGAS+LQVYLL+RLF+RKLGTSRV
Sbjct: 190 LVGASVLQVYLLQRLFERKLGTSRV 214


>ref|XP_002882543.1| hypothetical protein ARALYDRAFT_478100 [Arabidopsis lyrata subsp.
           lyrata] gi|297328383|gb|EFH58802.1| hypothetical protein
           ARALYDRAFT_478100 [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  283 bits (723), Expect = 6e-74
 Identities = 141/216 (65%), Positives = 165/216 (76%), Gaps = 1/216 (0%)
 Frame = +1

Query: 181 IKILSEMVLVKMWWAVSAVIISSLGGSFGIRFVIDREECFSHKVEY-GATVHFSFVVIKS 357
           + + + +VL+ + W+  A +        GIRFVIDREECFSHK EY G T+H SFVVIKS
Sbjct: 1   MSLKATIVLLGLLWSFQATL--------GIRFVIDREECFSHKAEYEGDTLHVSFVVIKS 52

Query: 358 EGAWNFNHDGVDLVVKGPTGEQIHDFRDKISEKAEFAAYQEGVYRFCFTSNSPYHETIDF 537
           +  W+FN DGVDLV+ GPTGEQIHDFR++IS K +F   ++GVYRFCFT+ SPYHETIDF
Sbjct: 53  DSQWHFNEDGVDLVIHGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDF 112

Query: 538 DXXXXXXXXXXXXXKDEHFQPLFEHISKLEEALYNIQFEQHWLEAQTERQAIVNEGMRKR 717
           D             KDEHF PL E ISKLEEALYNIQFEQHWLEAQT+RQAIVNE M KR
Sbjct: 113 DVQLGHFAYYDQHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKR 172

Query: 718 VMHKALYESAALVGASILQVYLLRRLFDRKLGTSRV 825
            +HKAL+ES AL+GAS+LQVYLLRRLF+RKLG SRV
Sbjct: 173 AVHKALFESFALIGASLLQVYLLRRLFERKLGMSRV 208


>gb|AAM66112.1| putative coated vesicle membrane protein [Arabidopsis thaliana]
          Length = 208

 Score =  282 bits (721), Expect = 9e-74
 Identities = 141/216 (65%), Positives = 164/216 (75%), Gaps = 1/216 (0%)
 Frame = +1

Query: 181 IKILSEMVLVKMWWAVSAVIISSLGGSFGIRFVIDREECFSHKVEY-GATVHFSFVVIKS 357
           + + + +VL+ + W+  A +        GIRFVIDREECFSHK EY G T+H SFVVIKS
Sbjct: 1   MSLKATIVLLGLLWSFQATL--------GIRFVIDREECFSHKAEYEGDTLHVSFVVIKS 52

Query: 358 EGAWNFNHDGVDLVVKGPTGEQIHDFRDKISEKAEFAAYQEGVYRFCFTSNSPYHETIDF 537
           +  W+FN DGVDLV+ GPTGEQIHDFR++IS K +F   ++GVYRFCFT+ SPYHETIDF
Sbjct: 53  DSQWHFNEDGVDLVIHGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDF 112

Query: 538 DXXXXXXXXXXXXXKDEHFQPLFEHISKLEEALYNIQFEQHWLEAQTERQAIVNEGMRKR 717
           D             KDEHF PL E ISKLEEALYNIQFEQHWLEAQT+RQAIVNE M KR
Sbjct: 113 DVQLGHFAYYDQHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKR 172

Query: 718 VMHKALYESAALVGASILQVYLLRRLFDRKLGTSRV 825
            +HKAL+ES AL+GAS LQVYLLRRLF+RKLG SRV
Sbjct: 173 AVHKALFESFALIGASFLQVYLLRRLFERKLGMSRV 208


>ref|NP_187425.1| emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis
           thaliana] gi|75313041|sp|Q9S7M9.1|P24B2_ARATH RecName:
           Full=Transmembrane emp24 domain-containing protein
           p24beta2; AltName: Full=p24 family protein beta1;
           Short=p24beta1; AltName: Full=p24 family protein beta2;
           Short=p24beta2; Flags: Precursor
           gi|6466951|gb|AAF13086.1|AC009176_13 putative coated
           vesicle membrane protein [Arabidopsis thaliana]
           gi|6648180|gb|AAF21178.1|AC013483_2 putative coated
           vesicle membrane protein [Arabidopsis thaliana]
           gi|13430712|gb|AAK25978.1|AF360268_1 putative coated
           vesicle membrane protein [Arabidopsis thaliana]
           gi|14532910|gb|AAK64137.1| putative coated vesicle
           membrane protein [Arabidopsis thaliana]
           gi|332641065|gb|AEE74586.1| emp24/gp25L/p24 family/GOLD
           domain-containing protein [Arabidopsis thaliana]
          Length = 208

 Score =  281 bits (720), Expect = 1e-73
 Identities = 141/210 (67%), Positives = 161/210 (76%), Gaps = 1/210 (0%)
 Frame = +1

Query: 199 MVLVKMWWAVSAVIISSLGGSFGIRFVIDREECFSHKVEY-GATVHFSFVVIKSEGAWNF 375
           +VL+ + W+  A +        GIRFVIDREECFSHK EY G T+H SFVVIKS+  W+F
Sbjct: 7   IVLLGLLWSFQATL--------GIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHF 58

Query: 376 NHDGVDLVVKGPTGEQIHDFRDKISEKAEFAAYQEGVYRFCFTSNSPYHETIDFDXXXXX 555
           N DGVDLV+ GPTGEQIHDFR++IS K +F   ++GVYRFCFT+ SPYHETIDFD     
Sbjct: 59  NEDGVDLVIHGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGH 118

Query: 556 XXXXXXXXKDEHFQPLFEHISKLEEALYNIQFEQHWLEAQTERQAIVNEGMRKRVMHKAL 735
                   KDEHF PL E ISKLEEALYNIQFEQHWLEAQT+RQAIVNE M KR +HKAL
Sbjct: 119 FAYYDQHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKAL 178

Query: 736 YESAALVGASILQVYLLRRLFDRKLGTSRV 825
           +ES AL+GAS LQVYLLRRLF+RKLG SRV
Sbjct: 179 FESFALIGASFLQVYLLRRLFERKLGMSRV 208


Top