BLASTX nr result

ID: Cephaelis21_contig00008981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008981
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...   239   4e-61
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   238   1e-60
emb|CBI36672.3| unnamed protein product [Vitis vinifera]              238   1e-60
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu...   225   9e-57
ref|XP_003548764.1| PREDICTED: uncharacterized protein LOC100818...   219   5e-55

>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  239 bits (611), Expect = 4e-61
 Identities = 121/163 (74%), Positives = 137/163 (84%)
 Frame = -2

Query: 860 LIKKNNPVLQIKITKQTIQNEQMGDAVGENLLKADKEEIENTLYVSSEELKSGQLPPEEI 681
           +IKK NPVLQIKI  + I   +   ++ +    ++KE+ +   Y + EELKSG+LPPEEI
Sbjct: 299 MIKKKNPVLQIKIVPKVITEHKDECSIMKESEDSEKEDFDLKPYATLEELKSGKLPPEEI 358

Query: 680 LSLPMFKNYSAGNPSPVLYVKNLAKDVVSDDFYLIFGSLFGSMDVAKSSLSVKLMQEGRM 501
           LSLPMFKNY+AGNP+PVLY+KNLAKDVV DDFY IFGSLFGS+D AKS LSVKLMQEGRM
Sbjct: 359 LSLPMFKNYTAGNPAPVLYIKNLAKDVVVDDFYFIFGSLFGSVDAAKSGLSVKLMQEGRM 418

Query: 500 RGQAFVTFPSVELAHSALNLVNGYVFKGKPMIIQFGRNPAAAK 372
           RGQAFVTFPSVELAH ALNLVNGYVFKGKPMIIQFGRNPAAAK
Sbjct: 419 RGQAFVTFPSVELAHHALNLVNGYVFKGKPMIIQFGRNPAAAK 461


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score =  238 bits (608), Expect = 1e-60
 Identities = 120/163 (73%), Positives = 137/163 (84%)
 Frame = -2

Query: 860 LIKKNNPVLQIKITKQTIQNEQMGDAVGENLLKADKEEIENTLYVSSEELKSGQLPPEEI 681
           +IKK NPVLQIKI  + I   +   ++ +    ++KE+ +   Y + EELKSG+LPPEEI
Sbjct: 299 MIKKKNPVLQIKIAPKVITEHKDECSIMKESEDSEKEDFDLKHYATLEELKSGKLPPEEI 358

Query: 680 LSLPMFKNYSAGNPSPVLYVKNLAKDVVSDDFYLIFGSLFGSMDVAKSSLSVKLMQEGRM 501
           LSLPMFKNY+AGNP+PVLY+KNLAKDVV DDFY IFGSLFGS+D AKS LSVKLMQEGRM
Sbjct: 359 LSLPMFKNYAAGNPAPVLYIKNLAKDVVVDDFYFIFGSLFGSVDAAKSGLSVKLMQEGRM 418

Query: 500 RGQAFVTFPSVELAHSALNLVNGYVFKGKPMIIQFGRNPAAAK 372
           RGQAFVTFPSVELAH ALN+VNGYVFKGKPMIIQFGRNPAAAK
Sbjct: 419 RGQAFVTFPSVELAHHALNVVNGYVFKGKPMIIQFGRNPAAAK 461


>emb|CBI36672.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score =  238 bits (608), Expect = 1e-60
 Identities = 120/163 (73%), Positives = 137/163 (84%)
 Frame = -2

Query: 860 LIKKNNPVLQIKITKQTIQNEQMGDAVGENLLKADKEEIENTLYVSSEELKSGQLPPEEI 681
           +IKK NPVLQIKI  + I   +   ++ +    ++KE+ +   Y + EELKSG+LPPEEI
Sbjct: 99  MIKKKNPVLQIKIAPKVITEHKDECSIMKESEDSEKEDFDLKHYATLEELKSGKLPPEEI 158

Query: 680 LSLPMFKNYSAGNPSPVLYVKNLAKDVVSDDFYLIFGSLFGSMDVAKSSLSVKLMQEGRM 501
           LSLPMFKNY+AGNP+PVLY+KNLAKDVV DDFY IFGSLFGS+D AKS LSVKLMQEGRM
Sbjct: 159 LSLPMFKNYAAGNPAPVLYIKNLAKDVVVDDFYFIFGSLFGSVDAAKSGLSVKLMQEGRM 218

Query: 500 RGQAFVTFPSVELAHSALNLVNGYVFKGKPMIIQFGRNPAAAK 372
           RGQAFVTFPSVELAH ALN+VNGYVFKGKPMIIQFGRNPAAAK
Sbjct: 219 RGQAFVTFPSVELAHHALNVVNGYVFKGKPMIIQFGRNPAAAK 261


>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
           gi|223535277|gb|EEF36954.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 450

 Score =  225 bits (574), Expect = 9e-57
 Identities = 112/165 (67%), Positives = 134/165 (81%)
 Frame = -2

Query: 860 LIKKNNPVLQIKITKQTIQNEQMGDAVGENLLKADKEEIENTLYVSSEELKSGQLPPEEI 681
           +IKK NPVLQIKI  +  Q EQ  D   +   + D+E +++  + + EEL+S +L PEEI
Sbjct: 286 VIKKKNPVLQIKIAPKVSQTEQTDDISMKESDEQDEEGLDHKPFATPEELESNKLAPEEI 345

Query: 680 LSLPMFKNYSAGNPSPVLYVKNLAKDVVSDDFYLIFGSLFGSMDVAKSSLSVKLMQEGRM 501
           LSLP FKNY+ GNP+ VLY+KNL+KD+V+DDF+ IFGSLFGS+D AK  LSVKLMQEGRM
Sbjct: 346 LSLPQFKNYTVGNPASVLYIKNLSKDMVADDFFYIFGSLFGSLDAAKVGLSVKLMQEGRM 405

Query: 500 RGQAFVTFPSVELAHSALNLVNGYVFKGKPMIIQFGRNPAAAKLN 366
           RGQAFVTFPSVELAH ALNLVNGYVFKGKPMIIQFGRNP+A+K N
Sbjct: 406 RGQAFVTFPSVELAHQALNLVNGYVFKGKPMIIQFGRNPSASKTN 450


>ref|XP_003548764.1| PREDICTED: uncharacterized protein LOC100818499 [Glycine max]
          Length = 456

 Score =  219 bits (559), Expect = 5e-55
 Identities = 109/163 (66%), Positives = 132/163 (80%)
 Frame = -2

Query: 860 LIKKNNPVLQIKITKQTIQNEQMGDAVGENLLKADKEEIENTLYVSSEELKSGQLPPEEI 681
           +IKKN+ VL+I I  +    E   D   + L + +K+  +   + + +EL+ G+LPPEEI
Sbjct: 293 VIKKNH-VLKINIVPKATVKEHKDDDTTQELQEPEKDVPDPNKFFTPDELERGKLPPEEI 351

Query: 680 LSLPMFKNYSAGNPSPVLYVKNLAKDVVSDDFYLIFGSLFGSMDVAKSSLSVKLMQEGRM 501
           LSLPMFKNY+AGNP+PVLY+KNLAKDV++DDFY IFGSLFGS++ AKS L VKLMQEGRM
Sbjct: 352 LSLPMFKNYTAGNPAPVLYIKNLAKDVIADDFYFIFGSLFGSIEAAKSGLQVKLMQEGRM 411

Query: 500 RGQAFVTFPSVELAHSALNLVNGYVFKGKPMIIQFGRNPAAAK 372
           RGQAF+TFPS+ELAH ALNLVNGYV KGKPMIIQFGRNPAAAK
Sbjct: 412 RGQAFITFPSIELAHHALNLVNGYVLKGKPMIIQFGRNPAAAK 454


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