BLASTX nr result

ID: Cephaelis21_contig00008964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008964
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30630.3| unnamed protein product [Vitis vinifera]              156   6e-36
ref|XP_002277951.1| PREDICTED: transcription elongation factor 1...   153   6e-35
ref|XP_002522506.1| Transcription elongation factor, putative [R...   149   9e-34
ref|XP_004146241.1| PREDICTED: transcription elongation factor 1...   147   3e-33
ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|2...   147   4e-33

>emb|CBI30630.3| unnamed protein product [Vitis vinifera]
          Length = 128

 Score =  156 bits (395), Expect = 6e-36
 Identities = 76/108 (70%), Positives = 81/108 (75%)
 Frame = +3

Query: 303 WLHSESTEEQRSNQEKMGXXXXXXXXXXXXXMDKLDTVFSCPFCNHGTSVECRIDMKNLI 482
           W+ S+S      +   MG             MDKLDTVFSCPFCNHGT VECRIDMKNLI
Sbjct: 18  WVFSKSEAFAEKDLSYMGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTGVECRIDMKNLI 77

Query: 483 GEATCRICQESFSTTVTALTEPIDIYSEWIDECERVNNLEDEGA*GGR 626
           GEA+CRICQESFSTTVTALTEPIDIYSEWIDECERVNNLED+G   GR
Sbjct: 78  GEASCRICQESFSTTVTALTEPIDIYSEWIDECERVNNLEDDGHLEGR 125


>ref|XP_002277951.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
           [Vitis vinifera]
          Length = 95

 Score =  153 bits (386), Expect = 6e-35
 Identities = 71/77 (92%), Positives = 73/77 (94%)
 Frame = +3

Query: 396 MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEATCRICQESFSTTVTALTEPIDIYSEWID 575
           MDKLDTVFSCPFCNHGT VECRIDMKNLIGEA+CRICQESFSTTVTALTEPIDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGTGVECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID 75

Query: 576 ECERVNNLEDEGA*GGR 626
           ECERVNNLED+G   GR
Sbjct: 76  ECERVNNLEDDGHLEGR 92


>ref|XP_002522506.1| Transcription elongation factor, putative [Ricinus communis]
           gi|223538197|gb|EEF39806.1| Transcription elongation
           factor, putative [Ricinus communis]
          Length = 88

 Score =  149 bits (376), Expect = 9e-34
 Identities = 66/73 (90%), Positives = 71/73 (97%)
 Frame = +3

Query: 396 MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEATCRICQESFSTTVTALTEPIDIYSEWID 575
           MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEA C ICQESFSTT+TALTEPID+YSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCAICQESFSTTITALTEPIDVYSEWID 75

Query: 576 ECERVNNLEDEGA 614
           ECERVNN++D+GA
Sbjct: 76  ECERVNNVDDDGA 88


>ref|XP_004146241.1| PREDICTED: transcription elongation factor 1 homolog [Cucumis
           sativus]
          Length = 88

 Score =  147 bits (372), Expect = 3e-33
 Identities = 67/73 (91%), Positives = 71/73 (97%)
 Frame = +3

Query: 396 MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEATCRICQESFSTTVTALTEPIDIYSEWID 575
           MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEA+CRICQESFSTT+TAL+E IDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEASCRICQESFSTTITALSEAIDIYSEWID 75

Query: 576 ECERVNNLEDEGA 614
           ECERVNNLED+ A
Sbjct: 76  ECERVNNLEDDAA 88


>ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|222859864|gb|EEE97411.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  147 bits (371), Expect = 4e-33
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = +3

Query: 396 MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEATCRICQESFSTTVTALTEPIDIYSEWID 575
           MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEA C ICQESFS T+TALTEPIDIYSEWID
Sbjct: 85  MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQESFSMTITALTEPIDIYSEWID 144

Query: 576 ECERVNNLEDEGA 614
           ECERVN+LED+GA
Sbjct: 145 ECERVNSLEDDGA 157


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