BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008956
         (3311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   624   e-176
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   613   e-172
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   612   e-172
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   612   e-172
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   611   e-172

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  624 bits (1608), Expect = e-176
 Identities = 365/1069 (34%), Positives = 566/1069 (52%), Gaps = 11/1069 (1%)
 Frame = -2

Query: 3301 INKIKEKMATLHLQGGSRNWDEWNKLQKDLVVEYKKE------EAYWHQKSRIEWLKQGD 3140
            + K+K+++ T   Q  SR+     ++ ++ V+ Y+ E      + YW Q++   WL +GD
Sbjct: 551  VKKVKKELETCRRQPISRD-----QVVREEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGD 605

Query: 3139 QNTKFFHALTMQRRRVNSIERLVTNEGFICTTREQIEQEIQSSFGSLFHSTQPANWEVVL 2960
            +NT FFHA   +RRR N I +L   +G      E     I   F  LF S    N + +L
Sbjct: 606  RNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLL 665

Query: 2959 AGIPRSITRAMNQRLTRPVDDLEIKKALFSMHPHKALGPDGMSPLFFQKCWNIVGPDICT 2780
              + R ++ AMN+ L       E+K+AL ++   KA GPDGM   F++ CW++VG  +  
Sbjct: 666  DVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTD 725

Query: 2779 AVKDFFASSKMLRSINHTHVSLIPKIKNPSCIAHYRPISLCNVVYKIISKILAERLKLFL 2600
             V +      +    N   + LIPK+K P  I   RPISLCNV YK++SK+LA RLK  L
Sbjct: 726  EVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKIL 785

Query: 2599 PNCIHESQSAFIKGRQILDNIVIAHECFHHLKNLRYNKEGYMALKLDMSKAFDRVEWNFL 2420
            P+ I  +QSAF+ GR I DNI+IA E  H+++N R  + GY A KLDMSKA+DRVEW+FL
Sbjct: 786  PDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFL 845

Query: 2419 EQVLLQMGFAPTFVNWLLICIRTTSFAFNLNGTPSGYLIPSRGIRQGDPISPYMFLICSE 2240
              ++L++GF   +VN ++ C+ T ++   +NG  S    P RG+RQGDP+SPY+FL+C+E
Sbjct: 846  HDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGLRQGDPLSPYLFLLCAE 905

Query: 2239 VFSHLIQRASQEGSFHEMRISKRGPLITHLFFADDSLVFCKANVAQATTILNLLELYGHG 2060
             FS L+ +  +EG  H +RI +  P ++HL FADDSL+ C+AN  +A  +  +L++Y   
Sbjct: 906  GFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEEC 965

Query: 2059 SGQLVNMQKSSIFFSKNTPRHMRSDICAVLHGITEHNNAKYLGLPLVIGRNKKEVFRYIT 1880
            SGQ++N  KS++ FS NT    +  + A L+   E  N +YLGLP+ +GR++ ++F Y+ 
Sbjct: 966  SGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLK 1025

Query: 1879 DSVANKIVNWKNKFLSLAGKEVLVKSVLSAMPVYAMFVLKLPSNICTEMEKSAARFWWNS 1700
            + +  +I  WK K LS AGKE+L+K+V  A+P +AM   +L  ++C ++ K  A++WW S
Sbjct: 1026 ERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWW-S 1084

Query: 1699 SGEQQSKIHWKSWQTMALDKSEGGLGFKSLQHFNSALLAKQLWRLITQPNLLMSHLLRAK 1520
            + E+ +K+HW SW  + L K+ GGLGF+ +  FN A+LAKQ WRLI  P+ L S +LRAK
Sbjct: 1085 NQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAK 1144

Query: 1519 YYPSGGLLAATATAQSLWLWKSWIGSKQILIDGAQYRIGNEKSIRIWDSPWLPLNPSFRP 1340
            Y+P G       T+   + W+S     ++L +G  +R+G+   I IW  PW+P   S +P
Sbjct: 1145 YFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP 1204

Query: 1339 LTPRPPNCELTWVSELMVDNGRSWNSTLVRSLFSVPDAHNILQIPISATGRKDALIWHHS 1160
            +TPR  N  +T V EL+     +W+  L+   F   D   I  IP+     +D L WH  
Sbjct: 1205 MTPRGANL-VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFD 1262

Query: 1159 TRGNFTVSSAYKRAMDLQRALLLR--PESSDTKQKRIAMWNRTWKLHIKGKIKHFIWRAY 986
             RG FTV SAYK   +++R       P  S+ +      W + WKL + GKIKHF+WR  
Sbjct: 1263 ARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMC 1322

Query: 985  HNILPTSAALSLKHIHCDTICKICGESTETLEHIFFYYKSAQLIWTLAPVHWDTLLLQPI 806
            HN L   A L  + +  DT C +CG   E   H+FF  K  + +       W  L L+ +
Sbjct: 1323 HNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKV-------WQALNLEEL 1375

Query: 805  TFQHWWETLCSLGNQTIH---QDRIELSAYLLWCIWKRRNDWYFNAHLMSESETIGRCMN 635
                  +T      Q+I+   ++    +   LW  WK RN+        S +E     M+
Sbjct: 1376 RSMLEQQTSGKNVLQSIYCRPENERTSAIVCLWQWWKERNEVREGGIPRSPAELSHLIMS 1435

Query: 634  EWQEFSQXXXXXXXXXSGVSGRANEPKVGTAPPPQSIPRLPPAAQFHTIFSSAIFHKWPD 455
            +  EF +           ++ +   P+ G      ++ R PP   F  I +   +     
Sbjct: 1436 QAGEFVR-----------MNVKEKSPRTGEC----AVWRRPP-LNFVKINTDGAYSSNMK 1479

Query: 454  PSAIGLLATDSDDQLIRAEARTHDCCLNSLSLSLEAVRSAMLMAYQLGWPKIIIQITNAS 275
                G +  D    +++A A       ++    + A  +A+  A + G  +I ++  +  
Sbjct: 1480 QGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETDSMM 1539

Query: 274  VATLLQTQSGVPAVLTTFFEDINLLKILFEDCIFSFIKTSVDHPCWKLS 128
            +   +Q  S     L++    I  +K +   C  SF  +     C K++
Sbjct: 1540 LRYAIQDNS---FNLSSLGGVILEIKHIILSCFHSFSVSYSPRSCNKVA 1585


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  613 bits (1580), Expect = e-172
 Identities = 338/1040 (32%), Positives = 553/1040 (53%), Gaps = 14/1040 (1%)
 Frame = -2

Query: 3238 EWNKLQKDLVVEYKKEEAYWHQKSRIEWLKQGDQNTKFFHALTMQRRRVNSIERLVTNEG 3059
            E  +L+K+L  EY  EE +W +KSRI W++ GD+NTK+FHA T  RR  N I++L+  EG
Sbjct: 317  ELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEG 376

Query: 3058 FICTTREQIEQEIQSSFGSLFHSTQPANWEVVLAGIPRSITRAMNQRLTRPVDDLEIKKA 2879
               T+ E + +  ++ F  LF S         L  +   ++  MN  L  P+   E+++A
Sbjct: 377  REWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKEEVQRA 436

Query: 2878 LFSMHPHKALGPDGMSPLFFQKCWNIVGPDICTAVKDFFASSKMLRSINHTHVSLIPKIK 2699
             FS++PHK  GPDGM+   +Q+ W  +G  I   V+ FF S  +   +N T++ LIPKI 
Sbjct: 437  TFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKIL 496

Query: 2698 NPSCIAHYRPISLCNVVYKIISKILAERLKLFLPNCIHESQSAFIKGRQILDNIVIAHEC 2519
                +  +RPISLCNV+YK+I K++A RLK  LP+ I E+Q+AF+KGR I DNI+IAHE 
Sbjct: 497  KAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHEL 556

Query: 2518 FHHLKNLRYNKEGYMALKLDMSKAFDRVEWNFLEQVLLQMGFAPTFVNWLLICIRTTSFA 2339
             H L +     E ++A+K D+SKA+DRVEW FLE+ +  +GFA  ++  ++ C+++  + 
Sbjct: 557  LHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQ 616

Query: 2338 FNLNGTPSGYLIPSRGIRQGDPISPYMFLICSEVFSHLIQRASQEGSFHEMRISKRGPLI 2159
              +NGTP G +IPSRG+RQGDP+SPY+F+IC+E+   ++Q A Q+     +++++  P I
Sbjct: 617  VLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPI 676

Query: 2158 THLFFADDSLVFCKANVAQATTILNLLELYGHGSGQLVNMQKSSIFFSKNTPRHMRSDIC 1979
            +HL FADDS+ +CK N      I+ ++E Y   SGQ VN  KSSI+F K+     R  + 
Sbjct: 677  SHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHISEERRCLVK 736

Query: 1978 AVLHGITEHNNAKYLGLPLVIGRNKKEVFRYITDSVANKIVNWKNKFLSLAGKEVLVKSV 1799
              L    E     YLGLP     +K     Y+ D +  K++ W++ FLS  GKE+L+K+V
Sbjct: 737  RKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAV 796

Query: 1798 LSAMPVYAMFVLKLPSNICTEMEKSAARFWWNSSGEQQSKIHWKSWQTMALDKSEGGLGF 1619
              A+P Y M   K+P  IC ++E   A FWW +  E +  +HWK+W  ++  K+ GGLGF
Sbjct: 797  AMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRG-LHWKAWCHLSRPKAVGGLGF 855

Query: 1618 KSLQHFNSALLAKQLWRLITQPNLLMSHLLRAKYYPSGGLLAATATAQSLWLWKSWIGSK 1439
            K ++ FN ALL KQLWR+IT+ + LM+ + +++Y+     L A   ++  + WKS   ++
Sbjct: 856  KEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQ 915

Query: 1438 QILIDGAQYRIGNEKSIRIWDSPWLPLNPSFRP-------LTPRPPNCELTWVSELMVDN 1280
             ++  G +  IGN ++I +W  PW+   P+          L  +     +  V +L++ +
Sbjct: 916  VLIKQGIRAVIGNGETINVWTDPWIGAKPAKAAQAVKRSHLVSQYAANSIHVVKDLLLPD 975

Query: 1279 GRSWNSTLVRSLFSVPDAHNILQIPISATGRKDALIWHHSTRGNFTVSSAYKRAMDLQRA 1100
            GR WN  LV  LF      NIL +       +D   W +S  G+++V S Y     +   
Sbjct: 976  GRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGY---WVMTEI 1032

Query: 1099 LLLRPESSDTKQKRI-AMWNRTWKLHIKGKIKHFIWRAYHNILPTSAALSLKHIHCDTIC 923
            +  R    +  Q  +  ++ + WKL +  KI HF+WR  +N L  ++ L+ +H+  +  C
Sbjct: 1033 INQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSC 1092

Query: 922  KICGESTETLEHIFFYYKSAQLIWTLAPV------HWDTLLLQPITFQHWWETLCSLGNQ 761
              C    ET+ H+ F    A+L W ++P+       W   L     F++    L    +Q
Sbjct: 1093 VRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGEWAESL-----FRNMHHVLSVHKSQ 1147

Query: 760  TIHQDRIELSAYLLWCIWKRRNDWYFNAHLMSESETIGRCMNEWQEFSQXXXXXXXXXSG 581
                D   L  ++LW +WK RND  F     +  + I +   +   ++            
Sbjct: 1148 PEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWN------------ 1195

Query: 580  VSGRANEPKVGTAPPPQSIPRLPPAAQFHTIFSSAIFHKWPDPSAIGLLATDSDDQLIRA 401
             + +  +P+V ++   + +   PP+  +    +   + K      +G +  +   +L+  
Sbjct: 1196 -NRKEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWL 1254

Query: 400  EARTHDCCLNSLSLSLEAVRSAMLMAYQLGWPKIIIQITNASVATLLQTQSGVPAVLTTF 221
              R      + L   +EA+R A+L   +  + ++I +  +  + +L+Q +  +P+ L   
Sbjct: 1255 GLRALPSQQSVLETEVEALRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPS-LAPR 1313

Query: 220  FEDINLLKILFEDCIFSFIK 161
             +DI  L   FE+  F F +
Sbjct: 1314 IQDIRNLLRHFEEVKFQFTR 1333


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  612 bits (1579), Expect = e-172
 Identities = 358/1039 (34%), Positives = 564/1039 (54%), Gaps = 7/1039 (0%)
 Frame = -2

Query: 3295 KIKEKMATLHL-QGGSRNWDEWNK---LQKDLVVEYKKEEAYWHQKSRIEWLKQGDQNTK 3128
            KI+     LH  QG + + D W +   L+++L   + K EAYW+ +SR+  +K GD+NT 
Sbjct: 299  KIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTS 358

Query: 3127 FFHALTMQRRRVNSIERLVTNEGFICTTREQIEQEIQSSFGSLFHSTQPAN--WEVVLAG 2954
            +FH    QR++ N I  +    G   T  E+IE  ++  F  +F S++P++  ++ VL  
Sbjct: 359  YFHHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQH 418

Query: 2953 IPRSITRAMNQRLTRPVDDLEIKKALFSMHPHKALGPDGMSPLFFQKCWNIVGPDICTAV 2774
            + RS+T+  N  L +P    EI  AL  MHP KA GPDGM  +F+Q+ W+I+G ++   V
Sbjct: 419  VKRSVTQEYNDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFV 478

Query: 2773 KDFFASSKMLRSINHTHVSLIPKIKNPSCIAHYRPISLCNVVYKIISKILAERLKLFLPN 2594
                 +     ++N T+++LIPK+K+P+ ++ +RPISLCNV+YKI SK +  RLK FLP 
Sbjct: 479  SSILHNYSCPGNVNCTNIALIPKVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKRFLPC 538

Query: 2593 CIHESQSAFIKGRQILDNIVIAHECFHHLKNLRYNKEGYMALKLDMSKAFDRVEWNFLEQ 2414
               E+QSAF+ GR I DN +IA E FH +K    +++G MA+KLDMSKA+DRVEW FL +
Sbjct: 539  IATENQSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRK 598

Query: 2413 VLLQMGFAPTFVNWLLICIRTTSFAFNLNGTPSGYLIPSRGIRQGDPISPYMFLICSEVF 2234
            +LL MGF   +VN ++ C+ T S++F +NG   G + PSRG+RQGDP+SP++F++ ++ F
Sbjct: 599  LLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAF 658

Query: 2233 SHLIQRASQEGSFHEMRISKRGPLITHLFFADDSLVFCKANVAQATTILNLLELYGHGSG 2054
            S ++++       H  + S+ GP I+HL FADDSL+F +A   +  TI+++L  Y   SG
Sbjct: 659  SQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASG 718

Query: 2053 QLVNMQKSSIFFSKNTPRHMRSDICAVLHGITEHNNAKYLGLPLVIGRNKKEVFRYITDS 1874
            Q +N +KS + FS+      + ++  +LH      + KYLG+P + GR+KK +FR + D 
Sbjct: 719  QKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDR 778

Query: 1873 VANKIVNWKNKFLSLAGKEVLVKSVLSAMPVYAMFVLKLPSNICTEMEKSAARFWWNSSG 1694
            +  K+  WK K LS AGKEVL+K+V+ A+P Y M V KLP  +  E+  + ARFWW   G
Sbjct: 779  MWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKG 838

Query: 1693 EQQSKIHWKSWQTMALDKSEGGLGFKSLQHFNSALLAKQLWRLITQPNLLMSHLLRAKYY 1514
            +++ K+HW SW+ M   K  GG+GFK L  FN ALL KQ+WRL+     L+S ++ AKYY
Sbjct: 839  DER-KMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYY 897

Query: 1513 PSGGLLAATATAQSLWLWKSWIGSKQILIDGAQYRIGNEKSIRIWDSPWLPLNPSFRPLT 1334
            P G +  A       + W+S  G+K ++++G  +R+G+   I IW +PW+         +
Sbjct: 898  PHGDVRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRFIKS 957

Query: 1333 PRPPNCELTWVSELMVDNGRSWNSTLVRSLFSVPDAHNILQIPISATGRKDALIWHHSTR 1154
             R    E+  V +LM    + WN  L+   F+  D   IL IP+S    +D L W +S  
Sbjct: 958  ARVEGLEV--VGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKD 1015

Query: 1153 GNFTVSSAYKRAMDLQRALLLRPESSDTKQKRIAMWNRTWKLHIKGKIKHFIWRAYHNIL 974
            G ++V +AY         +L +  + D   +   +WN  W L++  K++HF+WRA  + L
Sbjct: 1016 GTYSVKTAY---------MLGKGGNLDDFHR---VWNILWSLNVSPKVRHFLWRACTSSL 1063

Query: 973  PTSAALSLKHIHCDTICKICGESTETLEHIFFYYKSAQLIWTLAPVHWDTLLLQPITFQH 794
            P    L  +H+  +  C  C    ET  H+F+    +  +W     +   +LL  I  + 
Sbjct: 1064 PVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSY---ILLPGIEDEA 1120

Query: 793  WWETLCSLGNQTIHQDRIELSAYLLWCIWKRRNDWYFNAHLMSESETIG-RCMNEWQEFS 617
              +TL       +    ++   Y+LW +W  RN   F  H    +  +G R M + ++F+
Sbjct: 1121 MCDTLVRWSQ--MDAKVVQKGCYILWNVWVERNRRVFE-HTSQPATVVGQRIMRQVEDFN 1177

Query: 616  QXXXXXXXXXSGVSGRANEPKVGTAPPPQSIPRLPPAAQFHTIFSSAIFHKWPDPSAIGL 437
                         S  A  P    APP  +I     A        S     W     +G+
Sbjct: 1178 NYAVKIYGGMR--SSAALSPSRWYAPPVGAIKLNTDA--------SLAEEGW---VGLGV 1224

Query: 436  LATDSDDQLIRAEARTHDCCLNSLSLSLEAVRSAMLMAYQLGWPKIIIQITNASVATLLQ 257
            +A DS+ ++  A  R             +A+  A  +A   G+  +I + +++ VAT   
Sbjct: 1225 IARDSEGKVCFAATRRVRAYWPPEVAECKAIYMATRLAQAHGYGDVIFE-SDSLVATKRL 1283

Query: 256  TQSGVPAVLTTFFEDINLL 200
            T++ +      FF D++ +
Sbjct: 1284 TKAAI------FFSDLDAI 1296


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  612 bits (1577), Expect = e-172
 Identities = 334/850 (39%), Positives = 480/850 (56%), Gaps = 1/850 (0%)
 Frame = -2

Query: 3217 DLVVEYKKEEAYWHQKSRIEWLKQGDQNTKFFHALTMQRRRVNSIERLVTNEGFICTTRE 3038
            DL   ++ EE+YWH ++R   ++ GD+NTK+FH    QR+R N+I  L+   G     RE
Sbjct: 327  DLDEIHRLEESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKKGRE 386

Query: 3037 QIEQEIQSSFGSLFHSTQPANWEVVLAGIPRSITRAMNQRLTRPVDDLEIKKALFSMHPH 2858
            +I   +Q  F  LF +  P N E+ L G+   ++  MN  L       E+K+ALF+MHP+
Sbjct: 387  EICGVVQHYFEGLFATDSPVNMELALEGLSHCVSTDMNTALLMLPSGDEVKEALFAMHPN 446

Query: 2857 KALGPDGMSPLFFQKCWNIVGPDICTAVKDFFASSKMLRSINHTHVSLIPKIKNPSCIAH 2678
            KA G DG+  LFFQK W+I+G D+ + V+ ++     L  +N T + LIPK  +P  +  
Sbjct: 447  KAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHPQSMKD 506

Query: 2677 YRPISLCNVVYKIISKILAERLKLFLPNCIHESQSAFIKGRQILDNIVIAHECFHHLKNL 2498
            +RPISLC V+YKI+SK LA RLK+ LP  I  +QSAF+  R I DN ++A E FH +K  
Sbjct: 507  FRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFHAMKRK 566

Query: 2497 RYNKEGYMALKLDMSKAFDRVEWNFLEQVLLQMGFAPTFVNWLLICIRTTSFAFNLNGTP 2318
              NK G  ALKLDMSKA+DRVEW FLE+V+ +MGF   +++ ++ CI + SF FN+NG  
Sbjct: 567  DANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVV 626

Query: 2317 SGYLIPSRGIRQGDPISPYMFLICSEVFSHLIQRASQEGSFHEMRISKRGPLITHLFFAD 2138
             G L PSRG+RQGDPISPY+FL+C++ FS L+ +A+ E   H  +I +  P+++HLFFAD
Sbjct: 627  EGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFAD 686

Query: 2137 DSLVFCKANVAQATTILNLLELYGHGSGQLVNMQKSSIFFSKNTPRHMRSDICAVLHGIT 1958
            DS++F KA+V + + + +++  Y   SGQ VN+ K+ + FS++  R  RS I  VL    
Sbjct: 687  DSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKE 746

Query: 1957 EHNNAKYLGLPLVIGRNKKEVFRYITDSVANKIVNWKNKFLSLAGKEVLVKSVLSAMPVY 1778
                 KYLGLP +IGR+KK  F  I + +  K+  WK K LS  GKEVL+KSV  A+P Y
Sbjct: 747  VDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTY 806

Query: 1777 AMFVLKLPSNICTEMEKSAARFWWNSSGEQQSKIHWKSWQTMALDKSEGGLGFKSLQHFN 1598
             M V  LPS +  E+    ARFWW SS +   K+HW SW T+   KS GGLGF+ L  FN
Sbjct: 807  MMSVFSLPSGLIDEIHSLLARFWWGSS-DTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFN 865

Query: 1597 SALLAKQLWRLITQPNLLMSHLLRAKYYPSGGLLAATATAQSLWLWKSWIGSKQILIDGA 1418
             +LLAKQ WRL T    L+  LL+A+Y+ S  LL A       + W+S  GSK +L++G 
Sbjct: 866  QSLLAKQAWRLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSFTWRSIWGSKSLLLEGL 925

Query: 1417 QYRIGNEKSIRIWDSPWLPLNPSFRPLTPR-PPNCELTWVSELMVDNGRSWNSTLVRSLF 1241
            ++ +G+ + IR+W+  W+    +    TP+   N +L     + V  G +WN   V+  F
Sbjct: 926  KWCVGSGERIRVWEDAWILGEGAHMVPTPQADSNLDLKVCDLIDVARG-AWNIESVQQTF 984

Query: 1240 SVPDAHNILQIPISATGRKDALIWHHSTRGNFTVSSAYKRAMDLQRALLLRPESSDTKQK 1061
               +   +L IP+S     D   W  S  G F+V S Y     L R   +R       ++
Sbjct: 985  VEEEWELVLSIPLSRFLPDDHRYWWPSRNGIFSVRSCYW----LGRLGPVRTWQLQHGER 1040

Query: 1060 RIAMWNRTWKLHIKGKIKHFIWRAYHNILPTSAALSLKHIHCDTICKICGESTETLEHIF 881
               +W R W+L    K+ HF+WRA    L     L  +HI  D  C +CG+  E++ H  
Sbjct: 1041 ETELWRRVWQLQGPPKLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHAL 1100

Query: 880  FYYKSAQLIWTLAPVHWDTLLLQPITFQHWWETLCSLGNQTIHQDRIELSAYLLWCIWKR 701
            F    A+ IW ++       L+       + E L  L      ++   + ++ +W  W  
Sbjct: 1101 FDCTFARAIWQVSGF---ASLMMNAPLSSFSERLEWLAKHATKEEFRTMCSF-MWAGWFC 1156

Query: 700  RNDWYFNAHL 671
            RN   F   L
Sbjct: 1157 RNKLIFENEL 1166


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  611 bits (1575), Expect = e-172
 Identities = 335/894 (37%), Positives = 491/894 (54%), Gaps = 18/894 (2%)
 Frame = -2

Query: 3250 RNWDEWNKLQKDLVVEYKKEEAYWHQKSRIEWLKQGDQNTKFFHALTMQRRRVNSIERLV 3071
            R+ +E  +L   L   Y+ EE YW+QKSR  W+K GD N+KFFHALT QRR  N I  L 
Sbjct: 97   RSREEITELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLH 156

Query: 3070 TNEGFICTTREQIEQEIQSSFGSLFHSTQPANWEVVLAGIPRSITRAMNQRLTRPVDDLE 2891
               G      + I+    S F +LF +  P  ++  L  +   IT  +N  LT    + E
Sbjct: 157  DENGIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECE 216

Query: 2890 IKKALFSMHPHKALGPDGMSPLFFQKCWNIVGPDICTAVKDFFASSKMLRSINHTHVSLI 2711
            ++ ALF +HP KA GPDGM+ LFFQK W I+  D+ + V  F       + +N T++ LI
Sbjct: 217  VRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLI 276

Query: 2710 PKIKNPSCIAHYRPISLCNVVYKIISKILAERLKLFLPNCIHESQSAFIKGRQILDNIVI 2531
            PK + P+ +   RPISLCNV YK+ISKIL +RLK  LPN I E+QSAF+ GR I DNI+I
Sbjct: 277  PKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILI 336

Query: 2530 AHECFHHLKNLRYNKEGYMALKLDMSKAFDRVEWNFLEQVLLQMGFAPTFVNWLLICIRT 2351
            A E FH L+     K+ +MA+K DMSKA+D+VEWNF+E +L +MGF   +++W++ CI T
Sbjct: 337  AQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITT 396

Query: 2350 TSFAFNLNGTPSGYLIPSRGIRQGDPISPYMFLICSEVFSHLIQRASQEGSFHEMRISKR 2171
              +   +NG P G +IP RG+RQGDP+SPY+F++C+EV    I++A ++     ++++  
Sbjct: 397  VQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATP 456

Query: 2170 GPLITHLFFADDSLVFCKANVAQATTILNLLELYGHGSGQLVNMQKSSIFFSKNTPRHMR 1991
             P ++HL FADDSL FCKAN  Q   IL +L+ Y   SGQ +N  KSSI F       ++
Sbjct: 457  SPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIK 516

Query: 1990 SDICAVLHGITEHNNAKYLGLPLVIGRNKKEVFRYITDSVANKIVNWKNKFLSLAGKEVL 1811
            +DI  +L          YLGLP  +G +K +VF ++ D + ++I  W  KFLS  GKEV+
Sbjct: 517  ADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVM 576

Query: 1810 VKSVLSAMPVYAMFVLKLPSNICTEMEKSAARFWWNSSGEQQSKIHWKSWQTMALDKSEG 1631
            +KSV + +P Y M   +LP  I +++  + A+FWW+S+G+ +  +HW +W  +   KS+G
Sbjct: 577  IKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRG-MHWMAWDKLCSSKSDG 635

Query: 1630 GLGFKSLQHFNSALLAKQLWRLITQPNLLMSHLLRAKYYPSGGLLAATATAQSLWLWKSW 1451
            GLGF+++  FNSALLAKQLWRLIT P+ L + + + +Y+     L +  +    + W+S 
Sbjct: 636  GLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSM 695

Query: 1450 IGSKQILIDGAQYRIGNEKSIRIWDSPWLPLNPSFRPLTPRP---------PNCELTWVS 1298
            I ++ ++  G   R+G+  SI +W+ PW+P         PRP         P+ +   V 
Sbjct: 696  ISARSLVYKGLIKRVGSGASISVWNDPWIPAQ------FPRPAKYGGSIVDPSLK---VK 746

Query: 1297 ELMVDNGRSWNSTLVRSLFSVPDAHNILQIPISATGRKDALIWHHSTRGNFTVSSAYKRA 1118
             L+      WN  L++ LF   D   I  +PI     +D L WH +  GN+TV S Y  A
Sbjct: 747  SLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTA 806

Query: 1117 -MDLQRALLLRPESSDTKQKRIAMWNRTWKLHIKGKIKHFIWRAYHNILPTSAALSLKHI 941
             +DL     L      T +  I      WK+    K++HF+W+     +P S  L  + I
Sbjct: 807  RLDLNEGTTLIGPDLTTLKAYI------WKVQCPPKLRHFLWQILSGCVPVSENLRKRGI 860

Query: 940  HCDTICKICGESTETLEHIFFYYKSAQLIWTL-----APVHWDTLLLQPITFQHWWETLC 776
             CD  C  CG S E++ H  F    A+ IW L     AP  + +  +       +W    
Sbjct: 861  LCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNLDHLFWRIPS 920

Query: 775  SLGNQTIHQDRIELSAYLLWCIWKRRNDWYFNAHLMSESETIGRCMNE---WQE 623
             + +            +++W IWK RN+  F        E +   + E   WQE
Sbjct: 921  GVDSAPY--------PWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQE 966