BLASTX nr result

ID: Cephaelis21_contig00008903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008903
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago...   129   3e-28
ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subuni...   125   4e-27
ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subuni...   122   2e-26
ref|XP_002530707.1| DNA polymerase delta small subunit, putative...   120   9e-26
ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   119   3e-25

>ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago truncatula]
           gi|355500275|gb|AES81478.1| DNA polymerase delta small
           subunit [Medicago truncatula]
          Length = 454

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/95 (70%), Positives = 73/95 (76%)
 Frame = +1

Query: 1   DESGRVKLHGMFFHLLSMLQVVVVALHGKETGAGDFQVDEVIEAVLPEQVERPFKSGEDK 180
           DESGRVKL G        +  +VVALHGKETGAGDF V EV+EA LP Q+E P KS EDK
Sbjct: 115 DESGRVKLGGSIIVPSVYVTGIVVALHGKETGAGDFLVQEVLEAGLPPQIEFPIKSREDK 174

Query: 181 YVILVSGLDVGNSSSKPLLFQLLVDHITGHLGDEK 285
           YV+LVSGL VG+S S PL FQLLVDHITGHLGDEK
Sbjct: 175 YVVLVSGLSVGSSKSNPLQFQLLVDHITGHLGDEK 209


>ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/95 (67%), Positives = 73/95 (76%)
 Frame = +1

Query: 1   DESGRVKLHGMFFHLLSMLQVVVVALHGKETGAGDFQVDEVIEAVLPEQVERPFKSGEDK 180
           DESGRVKL G        +  +VVAL GKETGAGDF V +V++A LP Q+E P KS EDK
Sbjct: 115 DESGRVKLSGYIISPSEYVTGIVVALLGKETGAGDFLVQDVLQAGLPPQIEFPLKSREDK 174

Query: 181 YVILVSGLDVGNSSSKPLLFQLLVDHITGHLGDEK 285
           YV+LVSGL VG+SSS PL FQLL+DHITGHLGDEK
Sbjct: 175 YVVLVSGLSVGSSSSNPLQFQLLIDHITGHLGDEK 209


>ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/95 (66%), Positives = 72/95 (75%)
 Frame = +1

Query: 1   DESGRVKLHGMFFHLLSMLQVVVVALHGKETGAGDFQVDEVIEAVLPEQVERPFKSGEDK 180
           DESGRVKL G        +  +VVAL GKETGAGDF V +V++A LP Q+E P K  EDK
Sbjct: 115 DESGRVKLSGSIILPSEYVTGIVVALLGKETGAGDFLVQDVLDAGLPPQIEFPLKPREDK 174

Query: 181 YVILVSGLDVGNSSSKPLLFQLLVDHITGHLGDEK 285
           YV+LVSGL VG+SSS PL FQLL+DHITGHLGDEK
Sbjct: 175 YVVLVSGLSVGSSSSNPLQFQLLIDHITGHLGDEK 209


>ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
           gi|223529721|gb|EEF31661.1| DNA polymerase delta small
           subunit, putative [Ricinus communis]
          Length = 425

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/95 (65%), Positives = 74/95 (77%)
 Frame = +1

Query: 1   DESGRVKLHGMFFHLLSMLQVVVVALHGKETGAGDFQVDEVIEAVLPEQVERPFKSGEDK 180
           DESGRVKL G      + +  +VVALHGKETGAGDF V +V+EA LP Q+E P +S EDK
Sbjct: 121 DESGRVKLGGDMLTPSAYVTGLVVALHGKETGAGDFMVLDVLEAGLPPQIELPLQSREDK 180

Query: 181 YVILVSGLDVGNSSSKPLLFQLLVDHITGHLGDEK 285
           YV+ VSGL+VG+S+  PL FQLLVDHITGHLG+EK
Sbjct: 181 YVVFVSGLNVGSSTFNPLQFQLLVDHITGHLGNEK 215


>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
           gi|297739835|emb|CBI30017.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/95 (63%), Positives = 70/95 (73%)
 Frame = +1

Query: 1   DESGRVKLHGMFFHLLSMLQVVVVALHGKETGAGDFQVDEVIEAVLPEQVERPFKSGEDK 180
           DESGRVKL G        +   VV LHGKET AG+F V ++++A LP Q+E P KS EDK
Sbjct: 121 DESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDK 180

Query: 181 YVILVSGLDVGNSSSKPLLFQLLVDHITGHLGDEK 285
           YV+ VSGL VG+S+S PL FQLLVDHITGHLGDEK
Sbjct: 181 YVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEK 215


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