BLASTX nr result

ID: Cephaelis21_contig00008811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008811
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    83   3e-14
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    81   1e-13
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    81   1e-13
gb|EEC75230.1| hypothetical protein OsI_11503 [Oryza sativa Indi...    79   4e-13
gb|ABF95850.1| retrotransposon protein, putative, unclassified [...    79   4e-13

>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +3

Query: 102 WNTELINGLFSSDEAETILQIPISRLGNKDKLIWHHTAHGNFTVASAYKWLAKQRSQH-- 275
           W+ ELI GLF  ++ + IL IPI R G +D L WH    G F+V SAY  L  +R +H  
Sbjct: 427 WDKELIEGLFWEEDVKQILTIPI-RAGVEDGLAWHFDNRGIFSVKSAYHVLEDERRRHKP 485

Query: 276 -HQPPKTSNRWEQQKIMWSQLWSLKTKGKIKHFLWRAYHNILP 401
                 +S +   +K+ W Q+W L    K+KHF+W   HN LP
Sbjct: 486 KQDGASSSGQTNMEKLCWQQIWKLPYLPKVKHFIWHLAHNSLP 528


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = +3

Query: 69   VSKLMTGDGKNWNTELINGLFSSDEAETILQIPISRLGNKDKLIWHHTAHGNFTVASAY- 245
            V +L+      W+ +LI+ LF   +A  ILQIPIS  G +D + WHHT  G F+V SAY 
Sbjct: 777  VEELINPVSGGWDEDLIDTLFWPIDANRILQIPISA-GREDFVAWHHTRSGIFSVRSAYH 835

Query: 246  -KWLAKQRSQHHQPPKTSNRWEQQKIMWSQLWSLKTKGKIKHFLWRAYHNILPTSEIL 416
             +W AK  S+   P   S+     + +W  LW L+   KIK F WR  H ++P   IL
Sbjct: 836  CQWNAKFGSKERLPDGASS---SSRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGIL 890


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = +3

Query: 69   VSKLMTGDGKNWNTELINGLFSSDEAETILQIPISRLGNKDKLIWHHTAHGNFTVASAY- 245
            V +L+      W+ +LI+ LF   +A  ILQIPIS  G +D + WHHT  G F+V SAY 
Sbjct: 777  VEELINPVSGGWDEDLIDTLFWPIDANRILQIPISA-GREDFVAWHHTRSGIFSVRSAYH 835

Query: 246  -KWLAKQRSQHHQPPKTSNRWEQQKIMWSQLWSLKTKGKIKHFLWRAYHNILPTSEIL 416
             +W AK  S+   P   S+     + +W  LW L+   KIK F WR  H ++P   IL
Sbjct: 836  CQWNAKFGSKERLPDGASS---SSRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGIL 890


>gb|EEC75230.1| hypothetical protein OsI_11503 [Oryza sativa Indica Group]
          Length = 746

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/124 (33%), Positives = 64/124 (51%)
 Frame = +3

Query: 39  GRPDGCNLRWVSKLMTGDGKNWNTELINGLFSSDEAETILQIPISRLGNKDKLIWHHTAH 218
           G+ + C LRWVS+L+  + K+WN +LI  +    +A  IL+I + +   +D L WH    
Sbjct: 568 GKKNRCRLRWVSQLIRQEDKSWNEDLIRHVCHPIDAAEILKIKLPQFPAEDFLAWHFGKS 627

Query: 219 GNFTVASAYKWLAKQRSQHHQPPKTSNRWEQQKIMWSQLWSLKTKGKIKHFLWRAYHNIL 398
           G +TV S Y+ LA +    +    +SN    ++ +W   W +    K+K F WR   N L
Sbjct: 628 GVYTVRSGYR-LAMKAQLGNDASSSSNSLNGERCIWRDFWKIPAPPKVKIFAWRLATNGL 686

Query: 399 PTSE 410
            T E
Sbjct: 687 ATQE 690


>gb|ABF95850.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 940

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/124 (33%), Positives = 64/124 (51%)
 Frame = +3

Query: 39   GRPDGCNLRWVSKLMTGDGKNWNTELINGLFSSDEAETILQIPISRLGNKDKLIWHHTAH 218
            G+ + C LRWVS+L+  + K+WN +LI  +    +A  IL+I + +   +D L WH    
Sbjct: 673  GKKNRCRLRWVSQLIRQEDKSWNEDLIRHVCHPIDAAEILKIKLPQFPAEDFLAWHFGKS 732

Query: 219  GNFTVASAYKWLAKQRSQHHQPPKTSNRWEQQKIMWSQLWSLKTKGKIKHFLWRAYHNIL 398
            G +TV S Y+ LA +    +    +SN    ++ +W   W +    K+K F WR   N L
Sbjct: 733  GVYTVRSGYR-LAMKAQLGNDASSSSNSLNGERCIWRDFWKIPAPPKVKIFAWRLATNGL 791

Query: 399  PTSE 410
             T E
Sbjct: 792  ATQE 795


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