BLASTX nr result

ID: Cephaelis21_contig00008804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008804
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    77   1e-12
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    74   1e-11
emb|CBI28934.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    73   2e-11
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    72   5e-11

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/69 (44%), Positives = 49/69 (71%)
 Frame = +3

Query: 6   LDLLPHEVALDIISRLPVKSLIQSRFVCKFWHKLSFDPHLASLHLSNELKRNNPYLIFHC 185
           ++LLP E+A DI+SRLP+ SL++ + VC+ W  ++ DP + +L+LS   +  +P +I HC
Sbjct: 25  MELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVILHC 84

Query: 186 DVPIKNQLY 212
           D PI+N LY
Sbjct: 85  DFPIRNNLY 93


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +3

Query: 6   LDLLPHEVALDIISRLPVKSLIQSRFVCKFWHKLSFDPHLASLHLS-NELKRNNPYLIFH 182
           ++LLP E+A DI+SRLP+ SL+Q + VC+ W  L  DP L  L+LS +    ++P LI H
Sbjct: 25  MELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILH 84

Query: 183 CDVPIKNQLY 212
           CD PI+N LY
Sbjct: 85  CDFPIRNNLY 94


>emb|CBI28934.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = +3

Query: 3   WLDLLPHEVALDIISRLPVKSLIQSRFVCKFWHKLSFDPHLASLHLSNELKRNNPYLIFH 182
           +++ LP ++ LDI+SRLPV SL+Q RFVC+ W  ++ D  LAS HL     + NP LI H
Sbjct: 68  FMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLC-RTAQYNPCLILH 126

Query: 183 CDVPIKNQL 209
           CD PI+NQ+
Sbjct: 127 CDYPIRNQI 135


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = +3

Query: 3   WLDLLPHEVALDIISRLPVKSLIQSRFVCKFWHKLSFDPHLASLHLSNELKRNNPYLIFH 182
           +++ LP ++ LDI+SRLPV SL+Q RFVC+ W  ++ D  LAS HL     + NP LI H
Sbjct: 26  FMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLC-RTAQYNPCLILH 84

Query: 183 CDVPIKNQL 209
           CD PI+NQ+
Sbjct: 85  CDYPIRNQI 93


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/66 (51%), Positives = 44/66 (66%)
 Frame = +3

Query: 15  LPHEVALDIISRLPVKSLIQSRFVCKFWHKLSFDPHLASLHLSNELKRNNPYLIFHCDVP 194
           LP E+ALDI+SRLP+  LI  + VC+FW  L   P LAS+H S     N+P L+  CD+P
Sbjct: 26  LPCELALDILSRLPITHLINVKRVCRFWRSLVQHPLLASMHFSRIANNNDPCLLLLCDLP 85

Query: 195 IKNQLY 212
           IK+ LY
Sbjct: 86  IKSHLY 91


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