BLASTX nr result

ID: Cephaelis21_contig00008779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008779
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containi...   305   2e-80
emb|CBI39461.3| unnamed protein product [Vitis vinifera]              304   4e-80
ref|XP_002526313.1| conserved hypothetical protein [Ricinus comm...   295   2e-77
ref|XP_003611270.1| Pentatricopeptide repeat-containing protein ...   285   2e-74
ref|XP_002515828.1| conserved hypothetical protein [Ricinus comm...   285   2e-74

>ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 300

 Score =  305 bits (781), Expect = 2e-80
 Identities = 153/250 (61%), Positives = 190/250 (76%), Gaps = 2/250 (0%)
 Frame = -2

Query: 1024 VLRLMMRAMSLTKLVRQCSQLRLYGTRPV-SQHATVTQSSNSSTRNARTVESWDTQVVND 848
            +L  M ++ ++  LVRQ +QL     + + S ++T TQ+  S T N   V     Q  N 
Sbjct: 1    MLMAMSKSKAMVNLVRQFTQLGATRVQTLASSYSTFTQTQMSDTSNVGEVAFLGGQCNNQ 60

Query: 847  KQHNLPEANFGALPRPQIGENVSRKDKIGFLINTLSDLND-KEAIYSALDAWVAWEKNFP 671
              ++    +  ++ + QIGENVSRKDKI FL+ TL DL D KEA+Y ALDAWVAWE+NFP
Sbjct: 61   PMYHDSGKDAASVHKHQIGENVSRKDKINFLVTTLLDLKDSKEAVYGALDAWVAWEQNFP 120

Query: 670  IGPLKNVLLSLEKEQQWHKIIQVIKWMLSKGQGNTMGTYKQLIRALDMDHRAKEAHEFWM 491
            I  LK VL++LEKEQQWH++IQV+KWMLSKGQG TMGTY QLIRALDMDHRA+EAHEFW+
Sbjct: 121  IASLKRVLITLEKEQQWHRVIQVVKWMLSKGQGTTMGTYGQLIRALDMDHRAEEAHEFWV 180

Query: 490  RKIGYEFHSVPWELCKLMISIYYRNDMLQDLVNLFKGLEAFDRKPPEKSIVQKVADAYEM 311
            +KIG + HSVPW LC  MIS+YYRN+ML++LV LFKGLEAFDRKP +K +V+KVADAYEM
Sbjct: 181  KKIGTDLHSVPWHLCHRMISVYYRNNMLENLVKLFKGLEAFDRKPQDKLVVKKVADAYEM 240

Query: 310  LGLLEEKERV 281
            LGLLEEKER+
Sbjct: 241  LGLLEEKERI 250


>emb|CBI39461.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  304 bits (778), Expect = 4e-80
 Identities = 152/246 (61%), Positives = 188/246 (76%), Gaps = 2/246 (0%)
 Frame = -2

Query: 1012 MMRAMSLTKLVRQCSQLRLYGTRPV-SQHATVTQSSNSSTRNARTVESWDTQVVNDKQHN 836
            M ++ ++  LVRQ +QL     + + S ++T TQ+  S T N   V     Q  N   ++
Sbjct: 1    MSKSKAMVNLVRQFTQLGATRVQTLASSYSTFTQTQMSDTSNVGEVAFLGGQCNNQPMYH 60

Query: 835  LPEANFGALPRPQIGENVSRKDKIGFLINTLSDLND-KEAIYSALDAWVAWEKNFPIGPL 659
                +  ++ + QIGENVSRKDKI FL+ TL DL D KEA+Y ALDAWVAWE+NFPI  L
Sbjct: 61   DSGKDAASVHKHQIGENVSRKDKINFLVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASL 120

Query: 658  KNVLLSLEKEQQWHKIIQVIKWMLSKGQGNTMGTYKQLIRALDMDHRAKEAHEFWMRKIG 479
            K VL++LEKEQQWH++IQV+KWMLSKGQG TMGTY QLIRALDMDHRA+EAHEFW++KIG
Sbjct: 121  KRVLITLEKEQQWHRVIQVVKWMLSKGQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIG 180

Query: 478  YEFHSVPWELCKLMISIYYRNDMLQDLVNLFKGLEAFDRKPPEKSIVQKVADAYEMLGLL 299
             + HSVPW LC  MIS+YYRN+ML++LV LFKGLEAFDRKP +K +V+KVADAYEMLGLL
Sbjct: 181  TDLHSVPWHLCHRMISVYYRNNMLENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLL 240

Query: 298  EEKERV 281
            EEKER+
Sbjct: 241  EEKERI 246


>ref|XP_002526313.1| conserved hypothetical protein [Ricinus communis]
           gi|223534394|gb|EEF36102.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score =  295 bits (755), Expect = 2e-77
 Identities = 151/241 (62%), Positives = 180/241 (74%), Gaps = 1/241 (0%)
 Frame = -2

Query: 997 SLTKLVRQCSQLRLYGTRPVSQHATVTQSSNSSTRNARTVESWDTQVVNDKQHNLPEANF 818
           SLT  + Q    RL  +    ++++    +  S RN  +    D        HN  ++  
Sbjct: 9   SLTGRLSQVGVARLQCSN--GRYSSTMVQAQISNRNTPSPRPEDQDDYKTTCHNSNQSA- 65

Query: 817 GALPRPQIGENVSRKDKIGFLINTLSDLND-KEAIYSALDAWVAWEKNFPIGPLKNVLLS 641
           G + + QIG+NVSRK+KI FL+ TL DL D KEA+Y ALDAWVAWE NFPI  LK VL+ 
Sbjct: 66  GGVQKNQIGKNVSRKEKIDFLLKTLLDLKDSKEAVYGALDAWVAWEHNFPIASLKRVLIL 125

Query: 640 LEKEQQWHKIIQVIKWMLSKGQGNTMGTYKQLIRALDMDHRAKEAHEFWMRKIGYEFHSV 461
           LEKEQQWHK++QVIKWMLSKGQGNTMGTY QLIRALDMDHRA EAH FW++KIG + HSV
Sbjct: 126 LEKEQQWHKVVQVIKWMLSKGQGNTMGTYGQLIRALDMDHRANEAHMFWLKKIGLDLHSV 185

Query: 460 PWELCKLMISIYYRNDMLQDLVNLFKGLEAFDRKPPEKSIVQKVADAYEMLGLLEEKERV 281
           PW+LC  MIS+YYRN+ML+ LV LFKGLEAFDRKPP+KSI+QKVADAYEMLG+LEEKERV
Sbjct: 186 PWQLCHRMISVYYRNNMLESLVKLFKGLEAFDRKPPDKSILQKVADAYEMLGMLEEKERV 245

Query: 280 L 278
           L
Sbjct: 246 L 246


>ref|XP_003611270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512605|gb|AES94228.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 301

 Score =  285 bits (729), Expect = 2e-74
 Identities = 135/181 (74%), Positives = 157/181 (86%), Gaps = 3/181 (1%)
 Frame = -2

Query: 811 LPRPQIGENVSRKDKIGFLINTLSDLND---KEAIYSALDAWVAWEKNFPIGPLKNVLLS 641
           +P+  IGENVSRKD+  FL+ TL D++D   KEAIY ALDAWVAWE+NFPIG L+N+LL 
Sbjct: 53  IPKHYIGENVSRKDRTKFLLTTLRDMDDTDSKEAIYGALDAWVAWEQNFPIGSLRNILLC 112

Query: 640 LEKEQQWHKIIQVIKWMLSKGQGNTMGTYKQLIRALDMDHRAKEAHEFWMRKIGYEFHSV 461
           LEKEQQWH+I+QVIKWMLSKGQG TMGTY QLIRALDMDHR  EAH+FW  KIG + HSV
Sbjct: 113 LEKEQQWHRIVQVIKWMLSKGQGTTMGTYGQLIRALDMDHRVGEAHKFWEMKIGTDLHSV 172

Query: 460 PWELCKLMISIYYRNDMLQDLVNLFKGLEAFDRKPPEKSIVQKVADAYEMLGLLEEKERV 281
           PW+LC LMIS+YYRN+ML+DLV LFKGLEAFDRKP +K I+QKVA+AYEMLGL+EEKERV
Sbjct: 173 PWQLCHLMISVYYRNNMLEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLIEEKERV 232

Query: 280 L 278
           +
Sbjct: 233 M 233


>ref|XP_002515828.1| conserved hypothetical protein [Ricinus communis]
           gi|223545057|gb|EEF46570.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score =  285 bits (729), Expect = 2e-74
 Identities = 140/209 (66%), Positives = 165/209 (78%), Gaps = 1/209 (0%)
 Frame = -2

Query: 901 STRNARTVESWDTQVVNDKQHNLPEANFGALPRPQIGENVSRKDKIGFLINTLSDLND-K 725
           S RN  +    D        HN  ++  G + + QIG+NVSRK+KI FL+ TL DL D K
Sbjct: 7   SNRNTPSPRPEDQDDYKTTCHNSNQSA-GGVQKNQIGKNVSRKEKIDFLLKTLLDLKDSK 65

Query: 724 EAIYSALDAWVAWEKNFPIGPLKNVLLSLEKEQQWHKIIQVIKWMLSKGQGNTMGTYKQL 545
           EA+Y A+DAWVAWE NFPI  LK VL+ LEKEQQWH+++QVIKW++SKGQGNTMGTY QL
Sbjct: 66  EAVYGAVDAWVAWEHNFPIASLKRVLILLEKEQQWHRVVQVIKWIISKGQGNTMGTYGQL 125

Query: 544 IRALDMDHRAKEAHEFWMRKIGYEFHSVPWELCKLMISIYYRNDMLQDLVNLFKGLEAFD 365
           IRALDMDHRA EAH FW++KIG + HSVPW+LC  MIS+YYRN+ML+ LV L KGLEAFD
Sbjct: 126 IRALDMDHRANEAHMFWLKKIGLDLHSVPWQLCHRMISVYYRNNMLESLVKLSKGLEAFD 185

Query: 364 RKPPEKSIVQKVADAYEMLGLLEEKERVL 278
            KPP+KSIVQKVADAYEMLG+LEEKERVL
Sbjct: 186 HKPPDKSIVQKVADAYEMLGMLEEKERVL 214


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