BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008743
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   122   2e-49
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    96   4e-34
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               87   5e-31
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    87   5e-31
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    81   5e-30

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
            transferase, Ribonuclease H fold [Medicago truncatula]
          Length = 729

 Score =  122 bits (305), Expect(2) = 2e-49
 Identities = 62/201 (30%), Positives = 103/201 (51%)
 Frame = -2

Query: 1475 PIWKAIVKVWDKIKKCCRWSLGNGLTANFWFDYWVPGLNPLITYAVNVIPENVLSMVVKQ 1296
            P+WKAIV +WD  K+   W +G+G + NFW D W+     L + +     +  +S  V+ 
Sbjct: 337  PLWKAIVGIWDDFKRHVIWQIGDGRSTNFWLDKWISNNTSLFSSSTQSYVDTTIS--VRD 394

Query: 1295 FVDESGFWNMELIQNWLPLWVCSKIDELQAPPVSDDKDRVWWGLNNNGRLSIKYVVDFLQ 1116
             ++ SG W++  + + L + + ++I  L  P   D  D + WG  N  + +++   +  Q
Sbjct: 395  AINTSGVWDLNFLMDNLHVDIVNQILALPTPSDFDGPDTIGWGGTNTLKFTVQSAYNLQQ 454

Query: 1115 A*EEEEYSDDRLWN*IWAWNGPPKLRTFLWLVMHDRLPTVEVCFTKRVVQSPGCSRCSVE 936
               E  ++    W  +W W GP +++TF+WL  H R+ T        V  SP C  C+ E
Sbjct: 455  ---ENPFAVGGDWKTLWNWKGPHRIQTFIWLAAHGRILTNYRRSKWGVGISPTCPCCARE 511

Query: 935  VENVVHVLRDCSYTRAVGCRV 873
             E V+HVLRDC ++  V  R+
Sbjct: 512  DETVIHVLRDCVHSTQVWLRL 532



 Score =  102 bits (254), Expect(2) = 2e-49
 Identities = 61/197 (30%), Positives = 97/197 (49%)
 Frame = -3

Query: 850  LQLVDPNHWHLFFSLERKEWIRQNLVRDSWLVSGIELPWRIMFVVSCWSLWLWRNNALFS 671
            L+L+  N+   FFS + +EW+  NL +    +      W+  F+ +CW LW WRN ++F 
Sbjct: 530  LRLIPHNYITNFFSFDCREWVFNNLNKKG--IGDNPATWQTTFMTTCWYLWNWRNKSIFE 587

Query: 670  EEEQQLEPPIRRILCRSSEILAASIATAKVPGQAIQKVNEWSSWMSPQPDWIKINCDGSV 491
               Q+   P   I   + EI      T  V   + QK   +  WM P   W+K+NCDG+ 
Sbjct: 588  IGFQRPSNPTLVIQKFTREI---EDNTKLVHKSSHQKETIYIGWMRPPFGWVKLNCDGAW 644

Query: 490  ARERVIAAIGGVLRDEKGDWISGFS*RVGFEDILSIELKALLVGLNLTRSLGFERVELES 311
                 +A  GG+LRD  G WI G+  ++G  D    E+  + +GL++        + +ES
Sbjct: 645  KGSGTLAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGLDMAWRENTTHLIVES 704

Query: 310  NSNIAIKLLKKEAAGQC 260
            +S I + LL  + +G C
Sbjct: 705  DSKI-LSLLFDDISGAC 720


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 96.3 bits (238), Expect(2) = 4e-34
 Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
 Frame = -2

Query: 1475 PIWKAIVKVWDKIKKCCRWSLGNGLTANFWFDYWVPGLNPLITYAVNVIPENVLSMVVKQ 1296
            PIW+ IVK  + ++K     +GNG + + W+ +WV G  PL+    + IPE +    V  
Sbjct: 909  PIWRDIVKGRELLEKGLVRRIGNGRSTSLWYHWWVGG-GPLVDVMGSNIPEFMSHWQVSN 967

Query: 1295 FVDESGFWNMELIQNWLPLWVCSKIDELQAPPVSDDKDRVWWGLNNNGRLSIKYVVDFLQ 1116
             + + G W+ + I + LP  +  +I E+    +S+ +D   W    NG  S+K    +L 
Sbjct: 968  II-KRGRWDTKKISHLLPPDILKQIKEIPLASMSEVEDDFTWNFEKNGTFSVKSAY-YLI 1025

Query: 1115 A*EEEEYSDDRLWN*IWAWNGPPKLRTFLWLVMHDRLPTVEVCFTKRVVQ-SPGCSRCSV 939
               EEE      W  +W  N P K +  +W  +H+ LPT  +   KR+   +P C  C  
Sbjct: 1026 NRREEETGGKGSWRGLWRKNIPFKYKLLIWNGIHNILPTA-LFLAKRIHNFNPQCVACDH 1084

Query: 938  EVENVVHVLRDCSYTRAV 885
             +E+++H+ RDC    +V
Sbjct: 1085 PIEDMIHLFRDCCVASSV 1102



 Score = 76.6 bits (187), Expect(2) = 4e-34
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
 Frame = -3

Query: 835  PNHWHLFFSLERKEWIRQNLVRDSWLVSGIELPWRIMFVVSCWSLWLWRNNALFSEEEQQ 656
            PN+ +LFF+LE +EWI  NL +  +        W   F  + W +W  RN  +F      
Sbjct: 1112 PNNQNLFFNLEWEEWIDFNLNQHDY--------WVTKFTTAFWHIWCSRNKTVFECAVNH 1163

Query: 655  LEPPIRRILCRS-SEILAASIATAKVPGQAIQKVNEWSSWMSPQPDWIKINCDGSVARER 479
             +    R++    + I A  +   +  G  +        W  P   ++K+N DG+   + 
Sbjct: 1164 PKFTYNRVVADFFTNIRAFQVNNTQGNGSKVVL-----RWKPPHQGFLKLNTDGAWKADW 1218

Query: 478  VIAAIGGVLRDEKGDWISGFS*RVGFEDILSIELKALLVGLNLTRSLGFERVELESNSNI 299
              A IGGV RD  G+W  GF+ RV      + EL A+  GL +     + ++E+E ++  
Sbjct: 1219 ENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIREGLQVAWDCNYHKLEVECDAKG 1278

Query: 298  AIKLLKK 278
             ++LL K
Sbjct: 1279 VVQLLAK 1285


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 86.7 bits (213), Expect(2) = 5e-31
 Identities = 62/220 (28%), Positives = 93/220 (42%)
 Frame = -3

Query: 817  FFSLERKEWIRQNLVRDSWLVSGIELPWRIMFVVSCWSLWLWRNNALFSEEEQQLEPPIR 638
            FFS    EW+  NL   S      ++PW  +F V  W  W WR   +F E  +     ++
Sbjct: 474  FFSKSLFEWLYDNLGDRSGCE---DIPWSTIFAVIIWWGWKWRCGNIFGENTK-CRDRVK 529

Query: 637  RILCRSSEILAASIATAKVPGQAIQKVNEWSSWMSPQPDWIKINCDGSVARERVIAAIGG 458
             +   + E+  A      V G    +V     W+SP   W+K+N DG+      +A+ GG
Sbjct: 530  FVKEWAVEVYRAHSGNVLV-GITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGG 588

Query: 457  VLRDEKGDWISGFS*RVGFEDILSIELKALLVGLNLTRSLGFERVELESNSNIAIKLLKK 278
            VLRD  G W  GFS  +G       EL  +  GL         RVELE +S + +  LK 
Sbjct: 589  VLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKT 648

Query: 277  EAAGQCTNMSMTKEVASALKSLAQFKVSHILMECNSIVDG 158
              +       + +     L+     ++ H+  E N + DG
Sbjct: 649  GISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADG 688



 Score = 75.9 bits (185), Expect(2) = 5e-31
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
 Frame = -2

Query: 1469 WKAI-VKVWDKIKKCCRWSLGNGLTANFWFDYWVPGLNPLITYAVNVIPENVLSMVVKQF 1293
            W++I + + D +     W  G+G    FW D WV G  PL+       P +  ++V K  
Sbjct: 267  WRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSG-KPLLELDNGERPTDCDTVVAKDL 325

Query: 1292 VDESGFWNMELIQNWLPLWVCSKIDELQAPPVSDDKDRVWWGLNNNGRLSIKYVVDFLQA 1113
                  W+   I  +       ++  +    V+  +DR+ W  + +G+ S++   + L  
Sbjct: 326  WIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTV 385

Query: 1112 *EEEEYSDDRLWN*IWAWNGPPKLRTFLWLVMHDRLPTVEVCFTKRVVQSPGCSRCSVEV 933
             E    +    +N +W    P +++TFLWLV +  + T E    + +  S  C  C   V
Sbjct: 386  DEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGV 445

Query: 932  ENVVHVLRDCSYTRAVGCRV 873
            E+++HVLRDC     +  RV
Sbjct: 446  ESMLHVLRDCPAQLGIWVRV 465


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 86.7 bits (213), Expect(2) = 5e-31
 Identities = 62/220 (28%), Positives = 93/220 (42%)
 Frame = -3

Query: 817  FFSLERKEWIRQNLVRDSWLVSGIELPWRIMFVVSCWSLWLWRNNALFSEEEQQLEPPIR 638
            FFS    EW+  NL   S      ++PW  +F V  W  W WR   +F E  +     ++
Sbjct: 365  FFSKSLFEWLYDNLGDRSGCE---DIPWSTIFAVIIWWGWKWRCGNIFGENTK-CRDRVK 420

Query: 637  RILCRSSEILAASIATAKVPGQAIQKVNEWSSWMSPQPDWIKINCDGSVARERVIAAIGG 458
             +   + E+  A      V G    +V     W+SP   W+K+N DG+      +A+ GG
Sbjct: 421  FVKEWAVEVYRAHSGNVLV-GITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGG 479

Query: 457  VLRDEKGDWISGFS*RVGFEDILSIELKALLVGLNLTRSLGFERVELESNSNIAIKLLKK 278
            VLRD  G W  GFS  +G       EL  +  GL         RVELE +S + +  LK 
Sbjct: 480  VLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKT 539

Query: 277  EAAGQCTNMSMTKEVASALKSLAQFKVSHILMECNSIVDG 158
              +       + +     L+     ++ H+  E N + DG
Sbjct: 540  GISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADG 579



 Score = 75.9 bits (185), Expect(2) = 5e-31
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
 Frame = -2

Query: 1469 WKAI-VKVWDKIKKCCRWSLGNGLTANFWFDYWVPGLNPLITYAVNVIPENVLSMVVKQF 1293
            W++I + + D +     W  G+G    FW D WV G  PL+       P +  ++V K  
Sbjct: 158  WRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSG-KPLLELDNGERPTDCDTVVAKDL 216

Query: 1292 VDESGFWNMELIQNWLPLWVCSKIDELQAPPVSDDKDRVWWGLNNNGRLSIKYVVDFLQA 1113
                  W+   I  +       ++  +    V+  +DR+ W  + +G+ S++   + L  
Sbjct: 217  WIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTV 276

Query: 1112 *EEEEYSDDRLWN*IWAWNGPPKLRTFLWLVMHDRLPTVEVCFTKRVVQSPGCSRCSVEV 933
             E    +    +N +W    P +++TFLWLV +  + T E    + +  S  C  C   V
Sbjct: 277  DEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGV 336

Query: 932  ENVVHVLRDCSYTRAVGCRV 873
            E+++HVLRDC     +  RV
Sbjct: 337  ESMLHVLRDCPAQLGIWVRV 356


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 80.9 bits (198), Expect(2) = 5e-30
 Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
 Frame = -2

Query: 1469 WKAI-VKVWDKIKKCCRWSLGNGLTANFWFDYWVPGLNPLITYAVNVIPENVLSMVVKQF 1293
            W+++ V + + + K   W  G+G T  FW D W+    PL+    ++IPE     V   +
Sbjct: 773  WRSVAVGLREVVVKGVGWVPGDGCTIRFWLDRWLLQ-EPLVELGTDMIPEGERIKVAADY 831

Query: 1292 VDESGFWNMELIQNWLPLWVCSKIDELQAPPVSDDKDRVWWGLNNNGRLSIKYVVDFLQA 1113
                  WN+E++  +LP  V  ++  +       + D + W    +G  +++     LQ 
Sbjct: 832  WLPGSGWNLEILGLYLPETVKRRLLSVVVQVFLGNGDEISWKGTQDGAFTVRSAYSLLQG 891

Query: 1112 *EEEEYSDDRLWN*IWAWNGPPKLRTFLWLVMHDRLPTVEVCFTKRVVQSPGCSRCSVEV 933
               +  +    +N IW    P ++R F+WLV  + + T      + + ++  CS C+   
Sbjct: 892  DVGDRPNMGSFFNRIWKLITPERVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCNGAE 951

Query: 932  ENVVHVLRDC 903
            E ++HVLRDC
Sbjct: 952  ETILHVLRDC 961



 Score = 78.2 bits (191), Expect(2) = 5e-30
 Identities = 56/222 (25%), Positives = 90/222 (40%)
 Frame = -3

Query: 823  HLFFSLERKEWIRQNLVRDSWLVSGIELPWRIMFVVSCWSLWLWRNNALFSEEEQQLEPP 644
            H FFS    EW+  N+      V GI   W  +F +  W  W WR   +F E +      
Sbjct: 978  HEFFSQSLLEWLFTNMDP----VKGI---WPTLFGMGIWWAWKWRCCDVFGERKI-CRDR 1029

Query: 643  IRRILCRSSEILAASIATAKVPGQAIQKVNEWSSWMSPQPDWIKINCDGSVARERVIAAI 464
            ++ I   + E+    +         + +V     W  P   W+KI  DG+      +AA 
Sbjct: 1030 LKFIKDMAEEVRRVHVGAVGNRPNGV-RVERMIRWQVPSDGWVKITTDGASRGNHGLAAA 1088

Query: 463  GGVLRDEKGDWISGFS*RVGFEDILSIELKALLVGLNLTRSLGFERVELESNSNIAIKLL 284
            GG +R+ +G+W+ GF+  +G       EL     GL +    GF RVEL+ +  + +  L
Sbjct: 1089 GGAIRNGQGEWLGGFALNIGSCAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFL 1148

Query: 283  KKEAAGQCTNMSMTKEVASALKSLAQFKVSHILMECNSIVDG 158
                +       + +            +VSH+  E N + DG
Sbjct: 1149 STGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADG 1190