BLASTX nr result

ID: Cephaelis21_contig00008692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008692
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK77854.1|AF362735_1 succinate dehydrogenase subunit 4 [Sola...    90   1e-15
dbj|BAD83522.2| hypothetical protein (mitochondrion) [Nicotiana ...    87   5e-15
ref|YP_004237273.1| succinate dehydrogenase subunit 4 (mitochond...    87   9e-15
gb|ABD24440.1| succinate dehydrogenase subunit 4 [Populus tricho...    86   2e-14
gb|ABD24436.1| succinate dehydrogenase subunit 4 [Populus deltoi...    83   1e-13

>gb|AAK77854.1|AF362735_1 succinate dehydrogenase subunit 4 [Solanum lycopersicum]
          Length = 100

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 44/69 (63%), Positives = 51/69 (73%)
 Frame = -2

Query: 367 AFLLPFMIVYNKISSVFLLNLSLLWHISHGMGEIMADYVHQQMTRNXXXXXXXXXXLIAM 188
           AFLLP +I+Y K+SS FLLNLSL WHI+ G+ EIMADYVHQ+MTRN          LI +
Sbjct: 27  AFLLPLIIIYKKVSSTFLLNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVI 86

Query: 187 KDAFLSLVF 161
           KD FLSLVF
Sbjct: 87  KDVFLSLVF 95


>dbj|BAD83522.2| hypothetical protein (mitochondrion) [Nicotiana tabacum]
          Length = 125

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 43/68 (63%), Positives = 50/68 (73%)
 Frame = -2

Query: 367 AFLLPFMIVYNKISSVFLLNLSLLWHISHGMGEIMADYVHQQMTRNXXXXXXXXXXLIAM 188
           AFLLP +I+Y K+SS FLLNLSL WHI+ G+ EIMADYVHQ+MTRN          LI +
Sbjct: 50  AFLLPLIIIYKKVSSTFLLNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVI 109

Query: 187 KDAFLSLV 164
           KD FLSLV
Sbjct: 110 KDVFLSLV 117


>ref|YP_004237273.1| succinate dehydrogenase subunit 4 (mitochondrion) [Ricinus
           communis] gi|322394280|gb|ADW96037.1| succinate
           dehydrogenase subunit 4 (mitochondrion) [Ricinus
           communis]
          Length = 130

 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 46/78 (58%), Positives = 53/78 (67%)
 Frame = -2

Query: 367 AFLLPFMIVYNKISSVFLLNLSLLWHISHGMGEIMADYVHQQMTRNXXXXXXXXXXLIAM 188
           A LLPF I+Y K+SS FL NLSL WHI+ G+ EIMADYVHQ+MTRN          LI +
Sbjct: 50  ALLLPFFIIYKKVSSTFLPNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVI 109

Query: 187 KDAFLSLVF*GLRFLNKN 134
           KD FLSLV     FLNK+
Sbjct: 110 KDVFLSLV----SFLNKS 123


>gb|ABD24440.1| succinate dehydrogenase subunit 4 [Populus trichocarpa]
          Length = 108

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 45/78 (57%), Positives = 53/78 (67%)
 Frame = -2

Query: 367 AFLLPFMIVYNKISSVFLLNLSLLWHISHGMGEIMADYVHQQMTRNXXXXXXXXXXLIAM 188
           A LLP +I+Y K+SS FLLNLSL WHI+ G+ EIMADYVHQ+MTRN          LI +
Sbjct: 27  ALLLPLIIIYKKVSSTFLLNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVI 86

Query: 187 KDAFLSLVF*GLRFLNKN 134
           KD FLS V     FLNK+
Sbjct: 87  KDVFLSFV----SFLNKS 100


>gb|ABD24436.1| succinate dehydrogenase subunit 4 [Populus deltoides]
           gi|87133590|gb|ABD24437.1| succinate dehydrogenase
           subunit 4 [Populus nigra] gi|87133592|gb|ABD24438.1|
           succinate dehydrogenase subunit 4 [Populus tremuloides]
          Length = 106

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 44/78 (56%), Positives = 52/78 (66%)
 Frame = -2

Query: 367 AFLLPFMIVYNKISSVFLLNLSLLWHISHGMGEIMADYVHQQMTRNXXXXXXXXXXLIAM 188
           A LLP +I+Y K+SS FL NLSL WHI+ G+ EIMADYVHQ+MTRN          LI +
Sbjct: 27  ALLLPLIIIYKKVSSTFLPNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVI 86

Query: 187 KDAFLSLVF*GLRFLNKN 134
           KD FLS V     FLNK+
Sbjct: 87  KDVFLSFV----SFLNKS 100


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