BLASTX nr result

ID: Cephaelis21_contig00008674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008674
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1...   108   6e-22
gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populu...   107   1e-21
ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|22...   107   1e-21
ref|XP_002527096.1| ubiquitin 1, putative [Ricinus communis] gi|...   107   1e-21
ref|XP_002310680.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
           gi|449532435|ref|XP_004173186.1| PREDICTED:
           ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
          Length = 154

 Score =  108 bits (270), Expect = 6e-22
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 100 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 152



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           D +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct: 24  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76


>gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
          Length = 154

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/53 (98%), Positives = 53/53 (100%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTA+DYNIEGGSVLHLVLALRGG
Sbjct: 100 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGG 152



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           D +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct: 24  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76


>ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|223547286|gb|EEF48781.1|
           ubiquitin, putative [Ricinus communis]
          Length = 154

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/53 (98%), Positives = 53/53 (100%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTA+DYNIEGGSVLHLVLALRGG
Sbjct: 100 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGG 152



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           D +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct: 24  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76


>ref|XP_002527096.1| ubiquitin 1, putative [Ricinus communis]
           gi|223533519|gb|EEF35259.1| ubiquitin 1, putative
           [Ricinus communis]
          Length = 121

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/53 (98%), Positives = 53/53 (100%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTA+DYNIEGGSVLHLVLALRGG
Sbjct: 67  DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGG 119


>ref|XP_002310680.1| predicted protein [Populus trichocarpa] gi|222853583|gb|EEE91130.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/53 (98%), Positives = 53/53 (100%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTA+DYNIEGGSVLHLVLALRGG
Sbjct: 95  DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGG 147



 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = -1

Query: 562 DRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 404
           D +K ++++KEGIPP Q RL +AGK+L D +T  DYNI+ GS LHL L LRGG
Sbjct: 19  DSVKAKIQDKEGIPPDQLRLFFAGKRLEDGRTLADYNIQKGSTLHLNLRLRGG 71


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