BLASTX nr result

ID: Cephaelis21_contig00008629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008629
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19224.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   125   5e-27
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26

>emb|CBI19224.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  164 bits (414), Expect = 9e-39
 Identities = 87/147 (59%), Positives = 105/147 (71%)
 Frame = -2

Query: 441 DHLKTGILKLVNPRRSAEAVLQNWVDEGGGXXXXXXXXXXXXXXXXXXXRFKHALEILTW 262
           D L + +LKLV PRRSA AVLQNW+D+G                     R KHALEIL W
Sbjct: 38  DDLTSRMLKLVFPRRSATAVLQNWIDQG--HKVTASDLRNVSRQLLKSKRHKHALEILAW 95

Query: 261 METNDRSRMSSADHAMRLELTIKVHGLKRAEEYFEDLPSSISQKAACLPLLYSYIKERST 82
           ME  +R +MS+ADHA+RLEL IK+  L  AEEYFE LP+S S+KAACLPLL++Y+KER+ 
Sbjct: 96  MEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAI 155

Query: 81  EKAEALMLKISRLGLLVNPHPFNGMMK 1
           EKAEALMLK++ LGL V+PHPFN MMK
Sbjct: 156 EKAEALMLKLNDLGLTVSPHPFNEMMK 182


>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  164 bits (414), Expect = 9e-39
 Identities = 87/147 (59%), Positives = 105/147 (71%)
 Frame = -2

Query: 441 DHLKTGILKLVNPRRSAEAVLQNWVDEGGGXXXXXXXXXXXXXXXXXXXRFKHALEILTW 262
           D L + +LKLV PRRSA AVLQNW+D+G                     R KHALEIL W
Sbjct: 11  DDLTSRMLKLVFPRRSATAVLQNWIDQG--HKVTASDLRNVSRQLLKSKRHKHALEILAW 68

Query: 261 METNDRSRMSSADHAMRLELTIKVHGLKRAEEYFEDLPSSISQKAACLPLLYSYIKERST 82
           ME  +R +MS+ADHA+RLEL IK+  L  AEEYFE LP+S S+KAACLPLL++Y+KER+ 
Sbjct: 69  MEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAI 128

Query: 81  EKAEALMLKISRLGLLVNPHPFNGMMK 1
           EKAEALMLK++ LGL V+PHPFN MMK
Sbjct: 129 EKAEALMLKLNDLGLTVSPHPFNEMMK 155


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/147 (46%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
 Frame = -2

Query: 438 HLKTGILKLVNPRRSAEAVLQNWVDEGGGXXXXXXXXXXXXXXXXXXXRFKHALEILTWM 259
           +LK  I+KL +P  +  ++LQ W+D G                     R+KHALEI TWM
Sbjct: 30  NLKNQIMKLKSPGLNITSILQKWIDNG--HKVTVSQLRYINGLLVKSKRYKHALEIFTWM 87

Query: 258 ETNDRSRMSSADHAMRLELTIKVHGLKRAEEYFEDLP-SSISQKAACLPLLYSYIKERST 82
           ET    RMS +D+A+RLEL IKV+G++ AEEYF  +P  S+++KAA   LL+ Y+K +  
Sbjct: 88  ETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGYVKVKDV 147

Query: 81  EKAEALMLKISRLGLLVNPHPFNGMMK 1
            KAEALM+K+  LGL+VN +PFN MMK
Sbjct: 148 VKAEALMMKLYNLGLIVNCYPFNEMMK 174


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/149 (44%), Positives = 91/149 (61%)
 Frame = -2

Query: 447 AGDHLKTGILKLVNPRRSAEAVLQNWVDEGGGXXXXXXXXXXXXXXXXXXXRFKHALEIL 268
           +   L+T IL+L +P R    VLQ+W++ G                     R+K ALEIL
Sbjct: 48  SSSRLETEILRLKSPSR----VLQDWINNGN--KVKLSQLNLISKQLLKSKRYKQALEIL 101

Query: 267 TWMETNDRSRMSSADHAMRLELTIKVHGLKRAEEYFEDLPSSISQKAACLPLLYSYIKER 88
            WME  +  R++   HA+ +EL +KV+GL +A EYFE +P S S+KAA LPLL+ Y+KER
Sbjct: 102 QWMENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKER 161

Query: 87  STEKAEALMLKISRLGLLVNPHPFNGMMK 1
              KAE+ M+K+S  GLLV PHP+N MMK
Sbjct: 162 DISKAESFMIKLSSSGLLVTPHPYNEMMK 190


>ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Cucumis sativus]
          Length = 439

 Score =  122 bits (305), Expect = 4e-26
 Identities = 74/153 (48%), Positives = 88/153 (57%)
 Frame = -2

Query: 459 NGDDAGDHLKTGILKLVNPRRSAEAVLQNWVDEGGGXXXXXXXXXXXXXXXXXXXRFKHA 280
           NG D G   K   +KL  PR S   VLQ                           RF+ A
Sbjct: 62  NGGDDGK-FKQEFMKLKLPRSSVNTVLQR---------TSITKLRRVVKKFCKSKRFERA 111

Query: 279 LEILTWMETNDRSRMSSADHAMRLELTIKVHGLKRAEEYFEDLPSSISQKAACLPLLYSY 100
           LE L  MET D  RM  A+HA+RLELTIK HGL +AEEYF  LP+  SQKA+ LPLL+ Y
Sbjct: 112 LEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGY 171

Query: 99  IKERSTEKAEALMLKISRLGLLVNPHPFNGMMK 1
           +KER+TEKAEA M+K+   GL+VN H +N MMK
Sbjct: 172 VKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMK 204


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