BLASTX nr result

ID: Cephaelis21_contig00008625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008625
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP34362.1| fiber protein Fb15 [Gossypium barbadense]              154   3e-35
ref|XP_002527804.1| conserved hypothetical protein [Ricinus comm...   147   4e-33
ref|XP_002268964.1| PREDICTED: uncharacterized protein LOC100260...   146   6e-33
gb|AFW90556.1| fiber protein Fb15 [Solanum tuberosum]                 145   8e-33
ref|XP_002325265.1| predicted protein [Populus trichocarpa] gi|2...   143   5e-32

>gb|AAP34362.1| fiber protein Fb15 [Gossypium barbadense]
          Length = 90

 Score =  154 bits (388), Expect = 3e-35
 Identities = 68/89 (76%), Positives = 80/89 (89%)
 Frame = -3

Query: 656 MAMRNVYKEMKGLKVKEVPAKLKPMLSVDYLKNTIQRGLDNYHAKYILTDSVQPLYHVCF 477
           MAMR VY E+KG+K+KEVP   KPMLS+ YLK ++QRGLDNYHAKYI TDS++PLYHVCF
Sbjct: 1   MAMRKVYSEIKGMKLKEVPGYFKPMLSMGYLKKSVQRGLDNYHAKYIETDSIEPLYHVCF 60

Query: 476 GGMIFSYLVALPEERRHLQHQEHAKQHGH 390
           GGMIFSYLVALP ERRHL+H++HA+QHGH
Sbjct: 61  GGMIFSYLVALPNERRHLEHKKHAEQHGH 89


>ref|XP_002527804.1| conserved hypothetical protein [Ricinus communis]
           gi|223532800|gb|EEF34576.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score =  147 bits (370), Expect = 4e-33
 Identities = 66/89 (74%), Positives = 77/89 (86%)
 Frame = -3

Query: 656 MAMRNVYKEMKGLKVKEVPAKLKPMLSVDYLKNTIQRGLDNYHAKYILTDSVQPLYHVCF 477
           MA+R  Y E+KGLKVKEVP  +KPMLS+DYLK ++ R LDNY+ KYI T S+ PLYHVCF
Sbjct: 1   MALRRFYNEIKGLKVKEVPNHVKPMLSLDYLKKSVGRALDNYNEKYIQTGSIDPLYHVCF 60

Query: 476 GGMIFSYLVALPEERRHLQHQEHAKQHGH 390
           GGMIFSYLVALPEERRHL+HQ+HAK+HGH
Sbjct: 61  GGMIFSYLVALPEERRHLEHQQHAKEHGH 89


>ref|XP_002268964.1| PREDICTED: uncharacterized protein LOC100260603 isoform 1 [Vitis
           vinifera] gi|359484972|ref|XP_003633192.1| PREDICTED:
           uncharacterized protein LOC100260603 isoform 2 [Vitis
           vinifera]
          Length = 92

 Score =  146 bits (368), Expect = 6e-33
 Identities = 63/88 (71%), Positives = 78/88 (88%)
 Frame = -3

Query: 656 MAMRNVYKEMKGLKVKEVPAKLKPMLSVDYLKNTIQRGLDNYHAKYILTDSVQPLYHVCF 477
           MAMRN Y E++GLKVKE+PA +KPM ++DY+K +I +GLDNYHAKYI T S+ PL HVC+
Sbjct: 1   MAMRNFYNEIRGLKVKELPAHVKPMFTIDYIKKSINKGLDNYHAKYIQTSSIDPLLHVCY 60

Query: 476 GGMIFSYLVALPEERRHLQHQEHAKQHG 393
           GG+IFSYLVALPEERRHL+HQ+HAK+HG
Sbjct: 61  GGIIFSYLVALPEERRHLEHQQHAKEHG 88


>gb|AFW90556.1| fiber protein Fb15 [Solanum tuberosum]
          Length = 87

 Score =  145 bits (367), Expect = 8e-33
 Identities = 67/87 (77%), Positives = 76/87 (87%)
 Frame = -3

Query: 656 MAMRNVYKEMKGLKVKEVPAKLKPMLSVDYLKNTIQRGLDNYHAKYILTDSVQPLYHVCF 477
           MA+RN+YKEMKGLK+KEVPA LKPMLS+ Y KN I++GLDNYHAKYI T SV PL HVCF
Sbjct: 1   MALRNLYKEMKGLKLKEVPAHLKPMLSIGYAKNAIRKGLDNYHAKYIETSSVDPLLHVCF 60

Query: 476 GGMIFSYLVALPEERRHLQHQEHAKQH 396
           GGMIFSYLVALPEERRHL+H++H   H
Sbjct: 61  GGMIFSYLVALPEERRHLEHKQHGGGH 87


>ref|XP_002325265.1| predicted protein [Populus trichocarpa] gi|222866699|gb|EEF03830.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  143 bits (360), Expect = 5e-32
 Identities = 61/90 (67%), Positives = 78/90 (86%)
 Frame = -3

Query: 662 EKMAMRNVYKEMKGLKVKEVPAKLKPMLSVDYLKNTIQRGLDNYHAKYILTDSVQPLYHV 483
           ++MA+R +Y E+KGLKVKE+P  +KPMLS+ Y+K  +QRG+DNYHAKYI T S+ PL HV
Sbjct: 54  DQMALRKLYSEIKGLKVKELPDHVKPMLSIGYVKKAVQRGMDNYHAKYIETSSIDPLLHV 113

Query: 482 CFGGMIFSYLVALPEERRHLQHQEHAKQHG 393
           C+GGMI SYL+ALPEERRHL+HQ+HAK+HG
Sbjct: 114 CYGGMILSYLIALPEERRHLEHQQHAKEHG 143


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