BLASTX nr result

ID: Cephaelis21_contig00008597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008597
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|1...   192   2e-47
ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex s...   190   9e-47
ref|NP_001170025.1| uncharacterized protein LOC100383935 [Zea ma...   189   3e-46
ref|NP_001131652.1| uncharacterized protein LOC100193012 [Zea ma...   188   4e-46
ref|XP_004137455.1| PREDICTED: H/ACA ribonucleoprotein complex s...   188   5e-46

>ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|118483385|gb|ABK93593.1|
           unknown [Populus trichocarpa]
           gi|118485555|gb|ABK94629.1| unknown [Populus
           trichocarpa] gi|222851227|gb|EEE88774.1| predicted
           protein [Populus trichocarpa]
          Length = 155

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/108 (83%), Positives = 103/108 (95%)
 Frame = -2

Query: 522 KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPVLCEEAEIPYIYVPSKEDLANA 343
           KCLKRGVKEVVKSIRRG+KGLC+IAGNISPIDVITHVP+LCEE++IPY+YV SKEDLA+A
Sbjct: 48  KCLKRGVKEVVKSIRRGHKGLCIIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLASA 107

Query: 342 GSTKRPTCCVLVLTKPNKGELGKEAQEKLKGEYDQVVSDVTELANSMF 199
           G+TKRPTCCVLVLTKP KGE+GKE QEKLK +YDQVVSDV+EL +S+F
Sbjct: 108 GATKRPTCCVLVLTKPTKGEIGKEDQEKLKADYDQVVSDVSELTSSLF 155


>ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein
           [Vitis vinifera] gi|147867156|emb|CAN80504.1|
           hypothetical protein VITISV_035185 [Vitis vinifera]
           gi|297734127|emb|CBI15374.3| unnamed protein product
           [Vitis vinifera]
          Length = 157

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/108 (83%), Positives = 100/108 (92%)
 Frame = -2

Query: 522 KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPVLCEEAEIPYIYVPSKEDLANA 343
           KCLKRGVKEVVK IRRG+KG CVIAGNI+PIDVITHVP+LCEEA+IPY+YVPSKEDLANA
Sbjct: 50  KCLKRGVKEVVKGIRRGDKGFCVIAGNITPIDVITHVPILCEEADIPYVYVPSKEDLANA 109

Query: 342 GSTKRPTCCVLVLTKPNKGELGKEAQEKLKGEYDQVVSDVTELANSMF 199
           GSTKRPTCCVLVLTKP KGELG+E QEKLK EY QVVSDV+ L +++F
Sbjct: 110 GSTKRPTCCVLVLTKPTKGELGQEEQEKLKAEYTQVVSDVSGLTSTLF 157


>ref|NP_001170025.1| uncharacterized protein LOC100383935 [Zea mays]
           gi|224032981|gb|ACN35566.1| unknown [Zea mays]
           gi|413923844|gb|AFW63776.1| H/ACA ribonucleoprotein
           complex subunit 2 [Zea mays]
          Length = 149

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/108 (81%), Positives = 99/108 (91%)
 Frame = -2

Query: 522 KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPVLCEEAEIPYIYVPSKEDLANA 343
           KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVP+LCEEA +PY+YVPSKEDLA A
Sbjct: 42  KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATA 101

Query: 342 GSTKRPTCCVLVLTKPNKGELGKEAQEKLKGEYDQVVSDVTELANSMF 199
           G+TKRPTCCVLVLTKPNKGEL  E ++KLK +YDQVV++V E  ++MF
Sbjct: 102 GTTKRPTCCVLVLTKPNKGELSGEVKDKLKSDYDQVVTEVAEATSAMF 149


>ref|NP_001131652.1| uncharacterized protein LOC100193012 [Zea mays]
           gi|194692164|gb|ACF80166.1| unknown [Zea mays]
           gi|195607612|gb|ACG25636.1| h/ACA ribonucleoprotein
           complex subunit 2 [Zea mays]
          Length = 150

 Score =  188 bits (478), Expect = 4e-46
 Identities = 88/108 (81%), Positives = 99/108 (91%)
 Frame = -2

Query: 522 KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPVLCEEAEIPYIYVPSKEDLANA 343
           KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVP+LCEE+ +PYIYVPSKEDLA A
Sbjct: 43  KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEESNVPYIYVPSKEDLATA 102

Query: 342 GSTKRPTCCVLVLTKPNKGELGKEAQEKLKGEYDQVVSDVTELANSMF 199
           G+TKRPTCCVLVLTKPNKGEL  E ++KLK +YDQVV++V E  ++MF
Sbjct: 103 GTTKRPTCCVLVLTKPNKGELSDEVKDKLKSDYDQVVTEVAEATSAMF 150


>ref|XP_004137455.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like
           protein-like [Cucumis sativus]
           gi|449486884|ref|XP_004157431.1| PREDICTED: H/ACA
           ribonucleoprotein complex subunit 2-like protein-like
           [Cucumis sativus]
          Length = 158

 Score =  188 bits (477), Expect = 5e-46
 Identities = 89/108 (82%), Positives = 100/108 (92%)
 Frame = -2

Query: 522 KCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPVLCEEAEIPYIYVPSKEDLANA 343
           KCLKRGVKEVVKSIRRG KGLCVIAGNISPIDVITHVP+LCEE+EI Y+YVPSKEDLANA
Sbjct: 51  KCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANA 110

Query: 342 GSTKRPTCCVLVLTKPNKGELGKEAQEKLKGEYDQVVSDVTELANSMF 199
           GSTKRPTCCVLV TKPNKGELG   QEKLK ++DQVV++V+EL +++F
Sbjct: 111 GSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF 158


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