BLASTX nr result

ID: Cephaelis21_contig00008521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008521
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17596.3| unnamed protein product [Vitis vinifera]              145   8e-33
ref|XP_002533843.1| 60S ribosomal protein L38, putative [Ricinus...   139   3e-31
ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [V...   139   4e-31
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   139   4e-31
gb|AFK42835.1| unknown [Lotus japonicus]                              138   1e-30

>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  145 bits (365), Expect = 8e-33
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = -3

Query: 520 NSKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK 341
           NSKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK
Sbjct: 56  NSKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK 115

Query: 340 QSLPPGLSVQDL 305
           QSLPPGLSVQDL
Sbjct: 116 QSLPPGLSVQDL 127


>ref|XP_002533843.1| 60S ribosomal protein L38, putative [Ricinus communis]
           gi|223526222|gb|EEF28545.1| 60S ribosomal protein L38,
           putative [Ricinus communis]
          Length = 96

 Score =  139 bits (351), Expect = 3e-31
 Identities = 71/78 (91%), Positives = 73/78 (93%)
 Frame = -3

Query: 538 LFVGNPNSKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSE 359
           L VG  +  +PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSE
Sbjct: 19  LDVGKLHYFLPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSE 78

Query: 358 KADKLKQSLPPGLSVQDL 305
           KADKLKQSLPPGLSVQDL
Sbjct: 79  KADKLKQSLPPGLSVQDL 96


>ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [Vitis vinifera]
           gi|449442271|ref|XP_004138905.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449454586|ref|XP_004145035.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449506284|ref|XP_004162704.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
          Length = 69

 Score =  139 bits (350), Expect = 4e-31
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = -3

Query: 511 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 332
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 331 PPGLSVQDL 305
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  139 bits (350), Expect = 4e-31
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = -3

Query: 517 SKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 338
           S MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ
Sbjct: 30  STMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 89

Query: 337 SLPPGLSVQDL 305
           SLPPGLSVQD+
Sbjct: 90  SLPPGLSVQDV 100


>gb|AFK42835.1| unknown [Lotus japonicus]
          Length = 69

 Score =  138 bits (347), Expect = 1e-30
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = -3

Query: 511 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 332
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 331 PPGLSVQDL 305
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


Top