BLASTX nr result

ID: Cephaelis21_contig00007687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00007687
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADT92189.1| cleavage and polyadenylation specificity factor 5...    59   5e-07
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...    58   9e-07
ref|XP_002869668.1| hypothetical protein ARALYDRAFT_492272 [Arab...    58   9e-07
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...    58   9e-07
ref|XP_002321911.1| predicted protein [Populus trichocarpa] gi|1...    58   9e-07

>gb|ADT92189.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
          Length = 223

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -2

Query: 442 ELYDNVQRYGPVISTIPQQLSRFGFNMIH 356
           ELYDN+QRYGPVISTIPQQLSRF FNM H
Sbjct: 173 ELYDNIQRYGPVISTIPQQLSRFQFNMAH 201


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -2

Query: 442 ELYDNVQRYGPVISTIPQQLSRFGFNMI 359
           ELYDNVQRYGPVISTIPQQLSRF FNMI
Sbjct: 171 ELYDNVQRYGPVISTIPQQLSRFQFNMI 198


>ref|XP_002869668.1| hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp.
           lyrata] gi|297315504|gb|EFH45927.1| hypothetical protein
           ARALYDRAFT_492272 [Arabidopsis lyrata subsp. lyrata]
          Length = 200

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -2

Query: 442 ELYDNVQRYGPVISTIPQQLSRFGFNMI 359
           ELYDNVQRYGPVISTIPQQLSRF FNMI
Sbjct: 171 ELYDNVQRYGPVISTIPQQLSRFHFNMI 198


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -2

Query: 442 ELYDNVQRYGPVISTIPQQLSRFGFNMI 359
           ELYDNVQRYGPVISTIPQQLSRF FNMI
Sbjct: 171 ELYDNVQRYGPVISTIPQQLSRFQFNMI 198


>ref|XP_002321911.1| predicted protein [Populus trichocarpa] gi|118487488|gb|ABK95571.1|
           unknown [Populus trichocarpa]
           gi|222868907|gb|EEF06038.1| predicted protein [Populus
           trichocarpa]
          Length = 202

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -2

Query: 442 ELYDNVQRYGPVISTIPQQLSRFGFNMI 359
           ELYDNVQRYGPVISTIPQQLSRF FNMI
Sbjct: 173 ELYDNVQRYGPVISTIPQQLSRFQFNMI 200


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