BLASTX nr result

ID: Cephaelis21_contig00007562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00007562
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELW65852.1| Brain-specific homeobox protein like protein [Tup...    56   3e-06

>gb|ELW65852.1| Brain-specific homeobox protein like protein [Tupaia chinensis]
          Length = 1699

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = +3

Query: 102 RYFHNHCHIHQNCHSLHKHQHQQCVYL*GYFH---HHCCIHQNHSLRKHRYQQCVDH*CY 272
           +Y H+HCH  ++ H LH H      +L  + H   HH C H +H  + H +     H  +
Sbjct: 46  QYHHHHCHHCEHHHHLHHHHQHHQHHLQHHHHQHHHHHCYHHHHHYQHHHHHPHHHHHHH 105

Query: 273 FYYYYHNLIRKHQH**SIPC*SYCHHHY 356
           + +++H+L   H H        Y +HHY
Sbjct: 106 YQHHHHHLHHHHHH-------HYQYHHY 126


Top