BLASTX nr result
ID: Cephaelis21_contig00007507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00007507
(1613 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 514 e-143
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 513 e-143
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 496 e-138
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 491 e-136
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab... 482 e-133
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 514 bits (1323), Expect = e-143
Identities = 282/538 (52%), Positives = 368/538 (68%), Gaps = 1/538 (0%)
Frame = +1
Query: 1 VFKDEEPKKKKGIEKDETAVSTAVKCYFVQLDSLVGCGGNNESHVKSRSKINEARCHFMH 180
VFKD ++KK K+ T+ +VKCYFV + ES S ++EARC FMH
Sbjct: 262 VFKDGGKEEKK---KNPTS---SVKCYFVFM----------ESSALSGKTVHEARCIFMH 305
Query: 181 AHMVSSLEKYMARFSLILSKTIKLPIDLSSVVIERIEDIPCRDDNGCVIRDETGELLILT 360
AHMVSS+ KYMARFSLILSKT+KL +DLS+V I+RI+D P RD++G V+ DE + LILT
Sbjct: 306 AHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILT 365
Query: 361 DGTGFISEDLAMKCPQDFCTAKYLKDKDFKRICHFVGSVDGAFEAETVEGGRREPPLLMQ 540
DGTGFISEDLA++CP + C KY+ + + +C D + PLL+Q
Sbjct: 366 DGTGFISEDLALRCPNNLCRGKYMNNGN-SDVC------DSRY------------PLLIQ 406
Query: 541 CRLFSKGSAVKGTLLVNRKLGAGKIQIRPSMVKVERDIKCSISPTFDSLEIVTVSHKPRR 720
CRLF+ G AVKGTLL+NRKL IQIRPSM+KVE D K S + T +S+EI S++PRR
Sbjct: 407 CRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRR 466
Query: 721 CLLSKNLIALLSYGGVPRSFFMDLLVKALEETQSVFSNGKAALKVAITNGGMDDNATAAR 900
LSK LIALLSYGGVP +FM+LL ALE+ SV S+ +AAL+V++ G MDD+ R
Sbjct: 467 SYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVT-R 525
Query: 901 MISAGVPLNEPDLQTRLARLASSERRNLAEGKLPISESFYLMGTADPTGLLNRDQICVIL 1080
MI +G+P++EP L L+ + + ER+ L GKLP+++ FYLMGTADPTG L D++C+IL
Sbjct: 526 MILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIIL 585
Query: 1081 ENGQISGKVLVYRNPGLHFGDIHILEAVYVKELEDVIGNAKFGIFFSTKGQRSAATEMAN 1260
++GQ+ G+VLVY++PGLHFGDIH+L A YV+ LE+ +GNAK+ IFF KG RS A EMAN
Sbjct: 586 DHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMAN 645
Query: 1261 GDFDGDTYWVSRNPQLLRYFKPRKPWTRVYSTPAAVNKKPTEFSAXXXXXXXXXXXXDKP 1440
DFDGD YWVSRN QLL+YF+ +PW R ST +K+PT+FS
Sbjct: 646 SDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTR 705
Query: 1441 KQRLN-MAIAADSWMAFMDRLLVLGDNDANEIEVLTQNMLKLIDIYYDAIDASKSGKK 1611
Q + + +AAD+W+ FMDRLL L D+ ++E E L + ML+L DIYYDA+DA KSG K
Sbjct: 706 FQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMK 763
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 513 bits (1322), Expect = e-143
Identities = 282/538 (52%), Positives = 366/538 (68%), Gaps = 1/538 (0%)
Frame = +1
Query: 1 VFKDEEPKKKKGIEKDETAVSTAVKCYFVQLDSLVGCGGNNESHVKSRSKINEARCHFMH 180
VFKD ++KK K+ T+ +VKCYFV + ES S ++EARC FMH
Sbjct: 254 VFKDGGKEEKK---KNPTS---SVKCYFVFM----------ESSALSGKTVHEARCIFMH 297
Query: 181 AHMVSSLEKYMARFSLILSKTIKLPIDLSSVVIERIEDIPCRDDNGCVIRDETGELLILT 360
AHMVSS+ KYMARFSLILSKT+KL +DLS+V I+RI+D P RD++G V+ DE + LILT
Sbjct: 298 AHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILT 357
Query: 361 DGTGFISEDLAMKCPQDFCTAKYLKDKDFKRICHFVGSVDGAFEAETVEGGRREPPLLMQ 540
DGTGFISEDLA++CP + C KY+ + G+ D PLL+Q
Sbjct: 358 DGTGFISEDLALRCPNNLCRGKYMNN----------GNSD---------------PLLIQ 392
Query: 541 CRLFSKGSAVKGTLLVNRKLGAGKIQIRPSMVKVERDIKCSISPTFDSLEIVTVSHKPRR 720
CRLF+ G AVKGTLL+NRKL IQIRPSM+KVE D K S + T +S+EI S++PRR
Sbjct: 393 CRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRR 452
Query: 721 CLLSKNLIALLSYGGVPRSFFMDLLVKALEETQSVFSNGKAALKVAITNGGMDDNATAAR 900
LSK LIALLSYGGVP +FM+LL ALE+ SV S+ +AAL+V++ G MDD+ R
Sbjct: 453 SYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVT-R 511
Query: 901 MISAGVPLNEPDLQTRLARLASSERRNLAEGKLPISESFYLMGTADPTGLLNRDQICVIL 1080
MI +G+P++EP L L+ + + ER+ L GKLP+++ FYLMGTADPTG L D++C+IL
Sbjct: 512 MILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIIL 571
Query: 1081 ENGQISGKVLVYRNPGLHFGDIHILEAVYVKELEDVIGNAKFGIFFSTKGQRSAATEMAN 1260
++GQ+ G+VLVY++PGLHFGDIH+L A YV+ LE+ +GNAK+ IFF KG RS A EMAN
Sbjct: 572 DHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMAN 631
Query: 1261 GDFDGDTYWVSRNPQLLRYFKPRKPWTRVYSTPAAVNKKPTEFSAXXXXXXXXXXXXDKP 1440
DFDGD YWVSRN QLL+YF+ +PW R ST +K+PT+FS
Sbjct: 632 SDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTR 691
Query: 1441 KQRLN-MAIAADSWMAFMDRLLVLGDNDANEIEVLTQNMLKLIDIYYDAIDASKSGKK 1611
Q + + +AAD+W+ FMDRLL L D+ ++E E L + ML+L DIYYDA+DA KSG K
Sbjct: 692 FQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMK 749
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 496 bits (1276), Expect = e-138
Identities = 281/543 (51%), Positives = 362/543 (66%), Gaps = 6/543 (1%)
Frame = +1
Query: 1 VFKDEEPKKKKGIEKDETAVSTAVKCYFVQLDSLVGCGGNNESHVKSRSKINEARCHFMH 180
VFKD ++KK + ++AVKCYFV+++S E + S + EAR FMH
Sbjct: 344 VFKDGGKEEKK-----KNPTTSAVKCYFVRMESDAYID-KIEPYKLSNRTVFEARSLFMH 397
Query: 181 AHMVSSLEKYMARFSLILSKTIKLPIDLSSVVIERIEDIPCRDDNGCVIRDETGELLILT 360
AHMVSS+ YMARFSLILSKTI L IDLS+V ++RI DIPC+D G VI + G+ LI T
Sbjct: 398 AHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRD-GKPLIHT 456
Query: 361 DGTGFISEDLAMKCPQDFCTAKYLKDKDFKRICHFVGSVDGAFEAETVEGGR-----REP 525
DGTGFISEDLA++CP + + D D K I + + +G F+ +T++ REP
Sbjct: 457 DGTGFISEDLALECPMNVFKGQAKHDADLKAIWQRIPAFEG-FQNKTLQLTLPGLELREP 515
Query: 526 PLLMQCRLFSKGSAVKGTLLVNRKLGAGKIQIRPSMVKVERDIKCSISPTFDSLEIVTVS 705
PLL+Q RLF G AVKGT L+N++L IQIR SM+KVE D T +SLE+V S
Sbjct: 516 PLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTS 575
Query: 706 HKPRRCLLSKNLIALLSYGGVPRSFFMDLLVKALEETQSVFSNGKAALKVAITNGGMDDN 885
+ P+R LS+NLIALL+YGGVPR +FM++LV AL++ Q VFS+ +AAL+V+I NG MDD
Sbjct: 576 NPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDD- 634
Query: 886 ATAARMISAGVPLNEPDLQTRLARLASSERRNLAEGKLPISESFYLMGTADPTGLLNRDQ 1065
ARMI AG+PL+E LQ RL+ L E+++L G+L + E +YLMGT DPT L +
Sbjct: 635 FLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGE 694
Query: 1066 ICVILENGQISGKVLVYRNPGLHFGDIHILEAVYVKELEDVIGNAKFGIFFSTKGQRSAA 1245
+CVIL NGQI+GKVLVYRNPGLHFGDIH+L A YV++L V+GNAK+ IFFS+KG RS A
Sbjct: 695 VCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVA 754
Query: 1246 TEMANGDFDGDTYWVSRNPQLLRYFKPRKPWTRVYSTPAAVNKKPTEFSAXXXXXXXXXX 1425
E+A GDFDGD YWVSRN QLL YF+P +PW ST NKKP EFSA
Sbjct: 755 DEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKL 814
Query: 1426 XXDKPKQ-RLNMAIAADSWMAFMDRLLVLGDNDANEIEVLTQNMLKLIDIYYDAIDASKS 1602
Q ++AAD+W+A MD+ L+LG+ E + +L+LI+IYYDA+DA K
Sbjct: 815 FLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKK 874
Query: 1603 GKK 1611
G K
Sbjct: 875 GGK 877
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 491 bits (1263), Expect = e-136
Identities = 261/540 (48%), Positives = 353/540 (65%), Gaps = 3/540 (0%)
Frame = +1
Query: 1 VFKDEEPKKKKGIEKDETAVSTAVKCYFVQLDSLVGCGGNNESHVKSRSKINEARCHFMH 180
VFKD ++KK KD + + VKCYF++ DS C N ++ + I+EAR HFMH
Sbjct: 290 VFKDGGKEEKK---KDLS--TKKVKCYFIRTDSTASCDMENP-YIFTGKSIHEARMHFMH 343
Query: 181 AHMVSSLEKYMARFSLILSKTIKLPIDLSSVVIERIEDIPCRDDNGCVIRDETGELLILT 360
H +L YMARFSLILSKT L +D++ + + I+DI C D +G + D+ + I +
Sbjct: 344 VHRAPTLANYMARFSLILSKTKTLEVDMTGITFDPIDDIHCHDQDGKDVLDKNKKPCIHS 403
Query: 361 DGTGFISEDLAMKCPQDFCTAKYLKDKDFKRICHFVGSVDGAFEAETVEGGRREPPLLMQ 540
DGTG+ISEDLA CP + K L+ ++ + C+ ++PPLL+Q
Sbjct: 404 DGTGYISEDLARMCPLNIFKGKCLRSENIQEACN------------------QDPPLLIQ 445
Query: 541 CRLFSKGSAVKGTLLVNRKLGAGKIQIRPSMVKVERDIKCSISPTFDSLEIVTVSHKPRR 720
R+F G AVKGT L+N+KL +Q+RPSM+KV +D S TF++LE+VT S+ PRR
Sbjct: 446 FRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPRR 505
Query: 721 CLLSKNLIALLSYGGVPRSFFMDLLVKALEETQSVFSNGKAALKVAITNGGMDDNATAAR 900
LSKNL+ALLSYGG+P FF+D+L+ LEE++S+F N AAL VA+ G MDD AA+
Sbjct: 506 TKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMDDQ-NAAQ 564
Query: 901 MISAGVPLNEPDLQTRLARLASSERRNLAEGKLPISESFYLMGTADPTGLLNRDQICVIL 1080
MI G+PL+EP L+ L+ L +E+ +L G+LP++ES+YLMGT DPTG L D++CVIL
Sbjct: 565 MILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVIL 624
Query: 1081 ENGQISGKVLVYRNPGLHFGDIHILEAVYVKELEDVIGNAKFGIFFSTKGQRSAATEMAN 1260
E+GQISG+VLVYRNPGLHFGDIHIL+A YVK LE+ +GN+K+ +FF KG RS E+A
Sbjct: 625 ESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAG 684
Query: 1261 GDFDGDTYWVSRNPQLLRYFKPRKPWTRVYSTPAAVN--KKPTEFSAXXXXXXXXXXXXD 1434
GDFDGD Y++SRNP+LL +FKP +PW + + P+ N + P++ S
Sbjct: 685 GDFDGDMYFISRNPELLEHFKPSEPWVSL-TPPSKSNSGRAPSQLSPEELEEELFEMFLK 743
Query: 1435 KPKQRLN-MAIAADSWMAFMDRLLVLGDNDANEIEVLTQNMLKLIDIYYDAIDASKSGKK 1611
N + IAADSW+ MDRLL+LGD A E + + MLKLIDIYYDA+DA K G K
Sbjct: 744 AGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKGDK 803
>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
polymerase-like protein [Arabidopsis thaliana]
Length = 977
Score = 482 bits (1241), Expect = e-133
Identities = 258/540 (47%), Positives = 350/540 (64%), Gaps = 3/540 (0%)
Frame = +1
Query: 1 VFKDEEPKKKKGIEKDETAVSTAVKCYFVQLDSLVGCGGNNESHVKSRSKINEARCHFMH 180
VFKD ++KK KD + + VKCYF++ DS N ++ + I EAR HFMH
Sbjct: 286 VFKDGGKEEKK---KDLS--TKKVKCYFIRTDSTAFYDMQNP-YILTGKSIYEARMHFMH 339
Query: 181 AHMVSSLEKYMARFSLILSKTIKLPIDLSSVVIERIEDIPCRDDNGCVIRDETGELLILT 360
H +L YMARFSLILSKT L +D++ + ++I+DI C D +G + D+ + I +
Sbjct: 340 VHRAPTLANYMARFSLILSKTKTLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHS 399
Query: 361 DGTGFISEDLAMKCPQDFCTAKYLKDKDFKRICHFVGSVDGAFEAETVEGGRREPPLLMQ 540
DGTG+ISEDLA CP + K L+ + + C+ ++PPLL+Q
Sbjct: 400 DGTGYISEDLARMCPLNIFKGKCLRSESIQEACY------------------QDPPLLIQ 441
Query: 541 CRLFSKGSAVKGTLLVNRKLGAGKIQIRPSMVKVERDIKCSISPTFDSLEIVTVSHKPRR 720
R+F G AVKGT L+N+KL +Q+RPSM+KV +D S TF++LE+VT S+ P+R
Sbjct: 442 FRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKR 501
Query: 721 CLLSKNLIALLSYGGVPRSFFMDLLVKALEETQSVFSNGKAALKVAITNGGMDDNATAAR 900
LSKNL+ALLSYGG+P FF+D+L+ LEE++S+F N +AAL A+ G MDD AA+
Sbjct: 502 TKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQ-NAAQ 560
Query: 901 MISAGVPLNEPDLQTRLARLASSERRNLAEGKLPISESFYLMGTADPTGLLNRDQICVIL 1080
MI G+PL+EP L+ L+ L +E+ +L GKLP++ES+YLMGT DPTG L D++CVIL
Sbjct: 561 MILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKEDEVCVIL 620
Query: 1081 ENGQISGKVLVYRNPGLHFGDIHILEAVYVKELEDVIGNAKFGIFFSTKGQRSAATEMAN 1260
E+GQISG+VLVYRNPGLHFGDIHIL+A YVK LE+ +GN+KF +FF KG RS E+A
Sbjct: 621 ESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAG 680
Query: 1261 GDFDGDTYWVSRNPQLLRYFKPRKPWTRVYSTPAAVN--KKPTEFSAXXXXXXXXXXXXD 1434
GDFDGD Y++SRNP+LL FKP +PW + + P+ N + P++ S
Sbjct: 681 GDFDGDMYFISRNPELLENFKPSEPWVSL-TPPSKSNSGRAPSQLSPEELEEELFEMFLT 739
Query: 1435 KPKQRLN-MAIAADSWMAFMDRLLVLGDNDANEIEVLTQNMLKLIDIYYDAIDASKSGKK 1611
N + IAADSW+ MDR L+LGD+ A E + + ML+LIDIYYDA+DA K G K
Sbjct: 740 AGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDK 799