BLASTX nr result

ID: Cephaelis21_contig00007412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00007412
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...    79   3e-13
emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]    79   3e-13
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    74   1e-11
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...    74   1e-11
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...    74   2e-11

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
           vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
           product [Vitis vinifera]
          Length = 1091

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/45 (77%), Positives = 42/45 (93%)
 Frame = -2

Query: 252 KEVPVELLNNIGVLHFERGEFELAEQSFKDALGDGIWFKFLDAKA 118
           +EVP+ELLNNIGVL+FERGEFELAEQ+FK+A+GDGIW  F+D KA
Sbjct: 444 EEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIWLSFIDDKA 488


>emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
          Length = 788

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/45 (77%), Positives = 42/45 (93%)
 Frame = -2

Query: 252 KEVPVELLNNIGVLHFERGEFELAEQSFKDALGDGIWFKFLDAKA 118
           +EVP+ELLNNIGVL+FERGEFELAEQ+FK+A+GDGIW  F+D KA
Sbjct: 444 EEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIWLSFIDDKA 488


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/44 (72%), Positives = 39/44 (88%)
 Frame = -2

Query: 252 KEVPVELLNNIGVLHFERGEFELAEQSFKDALGDGIWFKFLDAK 121
           +EVP+E+LNN+GVLHFER EFELAE+ FK+ALGDGIW  F+D K
Sbjct: 417 QEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIWLDFIDGK 460


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
           sativus]
          Length = 1074

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/44 (72%), Positives = 39/44 (88%)
 Frame = -2

Query: 252 KEVPVELLNNIGVLHFERGEFELAEQSFKDALGDGIWFKFLDAK 121
           +EVP+E+LNN+GVLHFER EFELAE+ FK+ALGDGIW  F+D K
Sbjct: 441 QEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIWLDFIDGK 484


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
           max]
          Length = 1086

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = -2

Query: 252 KEVPVELLNNIGVLHFERGEFELAEQSFKDALGDGIWFKFLD 127
           +EVP+ELLNNIGVL FERGEFELA+Q+FK+ALGDG+W  F++
Sbjct: 441 QEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVWLSFIN 482


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