BLASTX nr result

ID: Cephaelis21_contig00007341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00007341
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   392   e-106
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...   354   3e-95
ref|XP_002869236.1| hypothetical protein ARALYDRAFT_491404 [Arab...   342   9e-92
ref|XP_004148390.1| PREDICTED: nuclear pore complex protein Nup8...   334   3e-89
dbj|BAF45348.1| nucleoporin [Lotus japonicus]                         331   3e-88

>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
            gi|296081842|emb|CBI20847.3| unnamed protein product
            [Vitis vinifera]
          Length = 715

 Score =  392 bits (1007), Expect = e-106
 Identities = 211/389 (54%), Positives = 261/389 (67%), Gaps = 1/389 (0%)
 Frame = -2

Query: 1164 MPGITSDSGEGTTSIVPVSQNPXXXXXXXXXXXXXXXXXXXXXXPISYPLHHGFKPPISR 985
            MPG+T+DSG    ++VP+S                          + YPLHHG KPPISR
Sbjct: 1    MPGLTADSGN---ALVPLSPEAHVS--------------------VVYPLHHGLKPPISR 37

Query: 984  LSISWARGNVLRVTVLR-LPQPSADHEEEAGGRVVEVKLNDNGDSEIDDAQWRRIAYGSV 808
            LSISW+RGN LRV+V R LP  S+D + EAGG+VV+VKL    D E+DDAQWRRIAYGSV
Sbjct: 38   LSISWSRGNALRVSVFRELPAESSDSDGEAGGKVVQVKLGV-ADGEVDDAQWRRIAYGSV 96

Query: 807  TPFALLQSRKNSVSTLSKMSALDNSQWXXXXXXXXXXXXXXXXXXXXXXXXXXXALDNSQ 628
            +PFALLQSR+NSV  LSKMS + +S +                              +  
Sbjct: 97   SPFALLQSRRNSVLALSKMS-MSSSPY------------------------------HPD 125

Query: 627  WLQYIMEYSKEINSVLGSTKLSPKSAIDDPKTVLEAVKKPTCLKAAWELMDIFYADQQSQ 448
            W +Y+MEYSK+I+S+L + K  P S IDDPKTVL+ V++PTCLKAAW L++IFYAD++SQ
Sbjct: 126  WWEYVMEYSKDISSLLDNAKSLPNSMIDDPKTVLKKVEEPTCLKAAWGLLEIFYADKESQ 185

Query: 447  AWIPERLLDWLADFDCLLSGTQPTVHSKLVDFQKELVTLQAVEDHPKYWEAISSALAIGW 268
            AW+PER++DWLAD+D L SGTQ TVHSKLV+FQKE+V LQ +ED P+YWE I+SALA+GW
Sbjct: 186  AWLPERIVDWLADYDVLFSGTQATVHSKLVEFQKEIVRLQVIEDDPRYWEVITSALAVGW 245

Query: 267  LEIVVKLLRLHXXXXXXXXXXXXXXXXXXXXXVKLLRLHGSYQFDQLGSRETENGLVEAV 88
            LEIVVK                            LLRLHGSYQ DQL +RETENGLVEAV
Sbjct: 246  LEIVVK----------------------------LLRLHGSYQLDQLSNRETENGLVEAV 277

Query: 87   AVLVSKMPRLRPDLEADKLGECYKSKPDF 1
            A+L+SKMPR+RP+LEA +LGEC+K+KPDF
Sbjct: 278  AILISKMPRMRPELEAGRLGECFKTKPDF 306


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
            gi|223544326|gb|EEF45847.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 725

 Score =  354 bits (908), Expect = 3e-95
 Identities = 186/344 (54%), Positives = 234/344 (68%), Gaps = 1/344 (0%)
 Frame = -2

Query: 1029 ISYPLHHGFKPPISRLSISWARGNVLRVTVLRLPQPSADHEEEAGGRVVEVKLNDNGDSE 850
            + YPL HG KPPISR+SIS+ARGN LR++V R P   +D + E GG+V+EVKL  NGD E
Sbjct: 31   VVYPLRHGLKPPISRVSISFARGNSLRISVFRQPFSDSDTDSEIGGKVLEVKLGGNGDGE 90

Query: 849  IDDAQWRRIAYGSVTPFALLQSRKNSVSTLSKMSALDNSQWXXXXXXXXXXXXXXXXXXX 670
            ++DA WRRIAY SV+P+ALL+SR+N  S LSK+  L  S +                   
Sbjct: 91   LNDAYWRRIAYASVSPYALLKSRRNCASNLSKLQ-LSPSPY------------------- 130

Query: 669  XXXXXXXXALDNSQWLQYIMEYSKEINSVLGSTKLSPKS-AIDDPKTVLEAVKKPTCLKA 493
                       + +W +Y+MEYSK+I+S L + K S     I+DPK  LE  ++PTCL+A
Sbjct: 131  -----------HLEWWEYVMEYSKDISSFLVNPKSSTAGPVIEDPKEFLEKRERPTCLRA 179

Query: 492  AWELMDIFYADQQSQAWIPERLLDWLADFDCLLSGTQPTVHSKLVDFQKELVTLQAVEDH 313
            AW+LM+IFYAD+ +Q+WIPER++DWL+D+D LLS TQ TV+ KLV+FQ+ELVTLQ +ED+
Sbjct: 180  AWDLMEIFYADKLAQSWIPERMVDWLSDYDILLSSTQETVYMKLVEFQEELVTLQVIEDN 239

Query: 312  PKYWEAISSALAIGWLEIVVKLLRLHXXXXXXXXXXXXXXXXXXXXXVKLLRLHGSYQFD 133
            PK+WE ISSALA+GWLEI VK                            +LRLHGSYQ D
Sbjct: 240  PKFWEVISSALAVGWLEIAVK----------------------------VLRLHGSYQLD 271

Query: 132  QLGSRETENGLVEAVAVLVSKMPRLRPDLEADKLGECYKSKPDF 1
            QLGSRETENGLVEAVAVLVSKMPR+RP L A KLGEC+K+KPDF
Sbjct: 272  QLGSRETENGLVEAVAVLVSKMPRIRPGLTAGKLGECFKAKPDF 315


>ref|XP_002869236.1| hypothetical protein ARALYDRAFT_491404 [Arabidopsis lyrata subsp.
            lyrata] gi|297315072|gb|EFH45495.1| hypothetical protein
            ARALYDRAFT_491404 [Arabidopsis lyrata subsp. lyrata]
          Length = 716

 Score =  342 bits (878), Expect = 9e-92
 Identities = 186/388 (47%), Positives = 238/388 (61%)
 Frame = -2

Query: 1164 MPGITSDSGEGTTSIVPVSQNPXXXXXXXXXXXXXXXXXXXXXXPISYPLHHGFKPPISR 985
            MPGITS+SG G   +    +                        P+ YPL +G K P+ R
Sbjct: 1    MPGITSESGGGELVLSSAKEK----------------------VPVLYPLSYGLKSPVHR 38

Query: 984  LSISWARGNVLRVTVLRLPQPSADHEEEAGGRVVEVKLNDNGDSEIDDAQWRRIAYGSVT 805
            LSISW  GN LRVTVLR P+   D++ +AGG+VV V+L+   D EI DAQWRRIAYGSV+
Sbjct: 39   LSISWGCGNNLRVTVLRNPKLRDDNDGDAGGKVVNVRLSGE-DGEISDAQWRRIAYGSVS 97

Query: 804  PFALLQSRKNSVSTLSKMSALDNSQWXXXXXXXXXXXXXXXXXXXXXXXXXXXALDNSQW 625
            PFALLQSR+NS+S+LS M    +                               L  + W
Sbjct: 98   PFALLQSRRNSISSLSMMDMSSS-------------------------------LHQTAW 126

Query: 624  LQYIMEYSKEINSVLGSTKLSPKSAIDDPKTVLEAVKKPTCLKAAWELMDIFYADQQSQA 445
             +Y+MEYS++I S+L +T  SP   I+DP++V+   ++PT LKAAWELM++FYAD+   +
Sbjct: 127  WEYVMEYSRDIKSLLSNTISSPAPLIEDPRSVITNAEEPTSLKAAWELMELFYADKTCLS 186

Query: 444  WIPERLLDWLADFDCLLSGTQPTVHSKLVDFQKELVTLQAVEDHPKYWEAISSALAIGWL 265
            W+PERL+DWL+ +D LLS + PT++SKL DFQKELV LQA+ED P+YW  ++SAL++GWL
Sbjct: 187  WLPERLVDWLSVYDILLSSSHPTIYSKLEDFQKELVGLQAIEDDPRYWGVMASALSVGWL 246

Query: 264  EIVVKLLRLHXXXXXXXXXXXXXXXXXXXXXVKLLRLHGSYQFDQLGSRETENGLVEAVA 85
            EIVV                            KLL LHGSYQ DQLG RETENGLVEA+A
Sbjct: 247  EIVV----------------------------KLLHLHGSYQLDQLGHRETENGLVEALA 278

Query: 84   VLVSKMPRLRPDLEADKLGECYKSKPDF 1
            VL+SKMPR+RP LE  K GECY +KPDF
Sbjct: 279  VLISKMPRMRPKLEDGKFGECYAAKPDF 306


>ref|XP_004148390.1| PREDICTED: nuclear pore complex protein Nup85-like [Cucumis sativus]
            gi|449507257|ref|XP_004162978.1| PREDICTED: nuclear pore
            complex protein Nup85-like [Cucumis sativus]
          Length = 720

 Score =  334 bits (856), Expect = 3e-89
 Identities = 181/348 (52%), Positives = 228/348 (65%), Gaps = 5/348 (1%)
 Frame = -2

Query: 1029 ISYPLHHGFKPPISRLSISWARGNVLRVTVLRLPQPSADH-----EEEAGGRVVEVKLND 865
            + YP+ H  KPPI+RLSISWARGN  RV++    Q  A+H     + E GG+V+EVK+  
Sbjct: 24   VVYPIRHELKPPIARLSISWARGNSFRVSIFT--QHPANHTSDSNDGEVGGQVLEVKIR- 80

Query: 864  NGDSEIDDAQWRRIAYGSVTPFALLQSRKNSVSTLSKMSALDNSQWXXXXXXXXXXXXXX 685
            NGD EI  A++RRIAYGSV+PFALLQSRK+ VS LSKMS                     
Sbjct: 81   NGDGEISAAEFRRIAYGSVSPFALLQSRKHMVSGLSKMSM-------------------- 120

Query: 684  XXXXXXXXXXXXXALDNSQWLQYIMEYSKEINSVLGSTKLSPKSAIDDPKTVLEAVKKPT 505
                            N    +Y+ EYSK+I+SV+G+ KL P SAI+DP  +L+ V++PT
Sbjct: 121  -----------GLPRFNPDGWEYLAEYSKDISSVIGNPKLIPSSAIEDPLEILKKVEEPT 169

Query: 504  CLKAAWELMDIFYADQQSQAWIPERLLDWLADFDCLLSGTQPTVHSKLVDFQKELVTLQA 325
            CLKAAWELMD+FYAD+QS  W+ ERL+DWLA++D +LS TQ T+HSKLVDFQKEL  LQ 
Sbjct: 170  CLKAAWELMDVFYADKQSHWWLNERLVDWLAEYDSVLSTTQSTIHSKLVDFQKELNNLQV 229

Query: 324  VEDHPKYWEAISSALAIGWLEIVVKLLRLHXXXXXXXXXXXXXXXXXXXXXVKLLRLHGS 145
            VED+P+YW+ I SALA+GW EIVVK                            +LRLHGS
Sbjct: 230  VEDNPRYWDVILSALAVGWQEIVVK----------------------------MLRLHGS 261

Query: 144  YQFDQLGSRETENGLVEAVAVLVSKMPRLRPDLEADKLGECYKSKPDF 1
            YQ DQL  RETENGLVEAVA L+S+MPR+RP+L++ K G+C+K+KPDF
Sbjct: 262  YQLDQLSRRETENGLVEAVAFLISEMPRMRPELDSGKFGQCFKTKPDF 309


>dbj|BAF45348.1| nucleoporin [Lotus japonicus]
          Length = 711

 Score =  331 bits (848), Expect = 3e-88
 Identities = 170/341 (49%), Positives = 221/341 (64%)
 Frame = -2

Query: 1023 YPLHHGFKPPISRLSISWARGNVLRVTVLRLPQPSADHEEEAGGRVVEVKLNDNGDSEID 844
            YPL+HG   PISR++ISW+RGN LRV++   P  ++   + +G +VVEVKL+   D EI 
Sbjct: 25   YPLNHGLSLPISRVAISWSRGNSLRVSLFAEPSATSPDSQASGAKVVEVKLSGE-DPEIS 83

Query: 843  DAQWRRIAYGSVTPFALLQSRKNSVSTLSKMSALDNSQWXXXXXXXXXXXXXXXXXXXXX 664
            D+ WRRIAYGSVTPFALLQSR++S++ LSK  +  +  W                     
Sbjct: 84   DSNWRRIAYGSVTPFALLQSRRSSLAALSKSPSPYHVDW--------------------- 122

Query: 663  XXXXXXALDNSQWLQYIMEYSKEINSVLGSTKLSPKSAIDDPKTVLEAVKKPTCLKAAWE 484
                        W ++++EYSK+I S+LG  KLSP   I+DP  +    ++PTCLKAAWE
Sbjct: 123  ------------W-EHVLEYSKDIASLLGGPKLSPGPIIEDPNAIATKCEEPTCLKAAWE 169

Query: 483  LMDIFYADQQSQAWIPERLLDWLADFDCLLSGTQPTVHSKLVDFQKELVTLQAVEDHPKY 304
            L+++FY D++SQAW+PERL+DWLADFD L + T  T+H KLV+FQKELV +Q +ED P+Y
Sbjct: 170  LLEMFYVDKRSQAWLPERLVDWLADFDSLFTSTHETIHGKLVNFQKELVNIQVIEDDPRY 229

Query: 303  WEAISSALAIGWLEIVVKLLRLHXXXXXXXXXXXXXXXXXXXXXVKLLRLHGSYQFDQLG 124
            WE +SSAL++GWL+IVVK                            +LRLHGSYQ DQL 
Sbjct: 230  WEVMSSALSVGWLDIVVK----------------------------MLRLHGSYQLDQLS 261

Query: 123  SRETENGLVEAVAVLVSKMPRLRPDLEADKLGECYKSKPDF 1
            SRE ENGLVE VAVL+SKMPRLRP+   + LGEC+KSKPDF
Sbjct: 262  SRERENGLVEVVAVLISKMPRLRPESAVENLGECFKSKPDF 302


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