BLASTX nr result

ID: Cephaelis21_contig00007307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00007307
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [...    69   2e-13
ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [...    63   5e-13
emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]    66   1e-12
ref|NP_193180.1| 3-hydroxyacyl-CoA dehydratase 1 [Arabidopsis th...    63   2e-12
ref|XP_003621860.1| Carnitinyl-CoA dehydratase [Medicago truncat...    63   2e-12

>ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score = 68.6 bits (166), Expect(2) = 2e-13
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 288 RLHPTLIGSIRSALAQVQSQATKGSVLITSAHGKFFSNGFDL 413
           RL PTL+ SIRSALAQV+SQAT GS LIT+AHGKFFSNG DL
Sbjct: 22  RLGPTLVDSIRSALAQVKSQATPGSALITTAHGKFFSNGLDL 63



 Score = 32.0 bits (71), Expect(2) = 2e-13
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +2

Query: 143 MCTLEKRGNIFYLTLTG 193
           MCTLE+RGN+F L LTG
Sbjct: 1   MCTLEQRGNLFLLILTG 17


>ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score = 63.2 bits (152), Expect(2) = 5e-13
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = +3

Query: 288 RLHPTLIGSIRSALAQVQSQATKGSVLITSAHGKFFSNGFDLRY 419
           RL P+L  SIRSALAQV+SQAT GS LIT+A GKFFSNG DL +
Sbjct: 22  RLGPSLFDSIRSALAQVKSQATPGSALITTAQGKFFSNGLDLAW 65



 Score = 35.8 bits (81), Expect(2) = 5e-13
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +2

Query: 143 MCTLEKRGNIFYLTLTG 193
           MCTLE+RGN+F+LTLTG
Sbjct: 1   MCTLEQRGNLFFLTLTG 17


>emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]
          Length = 238

 Score = 65.9 bits (159), Expect(2) = 1e-12
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +3

Query: 288 RLHPTLIGSIRSALAQVQSQATKGSVLITSAHGKFFSNGFDL 413
           RL PTL+ SIRSALAQV+SQAT GS LIT+AH KFFSNG DL
Sbjct: 22  RLGPTLVDSIRSALAQVKSQATPGSALITTAHDKFFSNGLDL 63



 Score = 32.0 bits (71), Expect(2) = 1e-12
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +2

Query: 143 MCTLEKRGNIFYLTLTG 193
           MCTLE+RGN+F L LTG
Sbjct: 1   MCTLEERGNLFLLILTG 17


>ref|NP_193180.1| 3-hydroxyacyl-CoA dehydratase 1 [Arabidopsis thaliana]
           gi|2244800|emb|CAB10223.1| carnitine racemase like
           protein [Arabidopsis thaliana]
           gi|7268150|emb|CAB78486.1| carnitine racemase like
           protein [Arabidopsis thaliana]
           gi|18252927|gb|AAL62390.1| carnitine racemase like
           protein [Arabidopsis thaliana]
           gi|30023700|gb|AAP13383.1| At4g14440 [Arabidopsis
           thaliana] gi|332658045|gb|AEE83445.1| 3-hydroxyacyl-CoA
           dehydratase 1 [Arabidopsis thaliana]
          Length = 238

 Score = 62.8 bits (151), Expect(2) = 2e-12
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = +3

Query: 288 RLHPTLIGSIRSALAQVQSQATKGSVLITSAHGKFFSNGFDLRY 419
           R HP  I S+ S L Q +SQ+TKGSVLIT+ HGKFFSNGFDL +
Sbjct: 22  RFHPDTIASVLSLLEQAKSQSTKGSVLITTGHGKFFSNGFDLAW 65



 Score = 33.9 bits (76), Expect(2) = 2e-12
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +2

Query: 143 MCTLEKRGNIFYLTLTG 193
           MCTLEKRG++F LTLTG
Sbjct: 1   MCTLEKRGDLFLLTLTG 17


>ref|XP_003621860.1| Carnitinyl-CoA dehydratase [Medicago truncatula]
           gi|355496875|gb|AES78078.1| Carnitinyl-CoA dehydratase
           [Medicago truncatula] gi|388518089|gb|AFK47106.1|
           unknown [Medicago truncatula]
          Length = 233

 Score = 62.8 bits (151), Expect(2) = 2e-12
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = +3

Query: 288 RLHPTLIGSIRSALAQVQSQATKGSVLITSAHGKFFSNGFDL 413
           RL+PTL+ SI+SAL +V+ QAT  SVLIT+AHGKFFSNG+D+
Sbjct: 22  RLNPTLLNSIKSALHRVRQQATTSSVLITTAHGKFFSNGYDI 63



 Score = 33.9 bits (76), Expect(2) = 2e-12
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +2

Query: 143 MCTLEKRGNIFYLTLTG 193
           MC+LEK+GNIF LTLTG
Sbjct: 1   MCSLEKKGNIFILTLTG 17


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