BLASTX nr result

ID: Cephaelis21_contig00007194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00007194
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   261   7e-68
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   240   2e-61
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   238   6e-61
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   228   1e-57
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                226   4e-57

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  261 bits (668), Expect = 7e-68
 Identities = 116/223 (52%), Positives = 167/223 (74%)
 Frame = +3

Query: 6    VKEFFHSGRLLKQLNHTIISLIPKKTHSSHVGDFRPIACCNVVYKVISKILASRLSVVLP 185
            ++EFF++ R+ + +N  +++L+PK  H++ V +FRPIACC V+YK+ISK+L +R+  ++ 
Sbjct: 481  IQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIG 540

Query: 186  RIIDEAQAAFVQGRSMADTVHLAQEILRQYSRKRVSPRCLMKVDLRKAYDSVSWRFLETV 365
             +++EAQ+ F+ GR +AD + LA E++R Y+RK +SPRC+MKVD+RKAYDSV W FLET+
Sbjct: 541  EVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETL 600

Query: 366  LRGLGCPARFLGWIMECVSTASYSIRINGDIYGLFAGRRGLRQGDPISPYLFVMCIEYLS 545
            L   G P+RF+GWIMECVST SYS+ +NG     F  R+GLRQGDP+SP+LF +C+EYLS
Sbjct: 601  LYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLS 660

Query: 546  RLLRRDTKGLQFTHHPRCASLKITHLVYADDLMLLSRADRPSV 674
            R L        F  HP+C  L ITHL++ADDL++  RAD+ S+
Sbjct: 661  RCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSL 703


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  240 bits (612), Expect = 2e-61
 Identities = 110/223 (49%), Positives = 158/223 (70%)
 Frame = +3

Query: 6    VKEFFHSGRLLKQLNHTIISLIPKKTHSSHVGDFRPIACCNVVYKVISKILASRLSVVLP 185
            + +FF +G + K +N T ++LIPK   + H  D+RPIACC+ +YK+ISKIL  RL  V+ 
Sbjct: 484  ILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVIT 543

Query: 186  RIIDEAQAAFVQGRSMADTVHLAQEILRQYSRKRVSPRCLMKVDLRKAYDSVSWRFLETV 365
             ++D AQ  F+  R + D + LA E++R Y+R+ VSPRC++KVD+RKAYDSV W FLE++
Sbjct: 544  EVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESM 603

Query: 366  LRGLGCPARFLGWIMECVSTASYSIRINGDIYGLFAGRRGLRQGDPISPYLFVMCIEYLS 545
            L+ LG P+ F+ WIM CV T SYSI +NG     F  ++GLRQGDP+SP+LF + +EYLS
Sbjct: 604  LKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLS 663

Query: 546  RLLRRDTKGLQFTHHPRCASLKITHLVYADDLMLLSRADRPSV 674
            R +    K  +F  HP+C  +K+THL++ADDL++ +RAD  S+
Sbjct: 664  RCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSI 706


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  238 bits (608), Expect = 6e-61
 Identities = 111/229 (48%), Positives = 166/229 (72%)
 Frame = +3

Query: 3   AVKEFFHSGRLLKQLNHTIISLIPKKTHSSHVGDFRPIACCNVVYKVISKILASRLSVVL 182
           A+ +FF +G + K +N T ++L+PK+ + + V +FRPIACC+V+YK+ISKIL SR+  VL
Sbjct: 163 AILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVL 222

Query: 183 PRIIDEAQAAFVQGRSMADTVHLAQEILRQYSRKRVSPRCLMKVDLRKAYDSVSWRFLET 362
             ++ E Q+AFV+GR + D + L+ E+++ YSRK +SPRC++K+DL+KAY+SV W F++ 
Sbjct: 223 NSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPFIKH 282

Query: 363 VLRGLGCPARFLGWIMECVSTASYSIRINGDIYGLFAGRRGLRQGDPISPYLFVMCIEYL 542
           ++  LG   +F+ W+M C++TASY+  INGD+   FA ++GLRQGDPISPYLFV+C+EYL
Sbjct: 283 LMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFAAKKGLRQGDPISPYLFVICMEYL 342

Query: 543 SRLLRRDTKGLQFTHHPRCASLKITHLVYADDLMLLSRADRPSVRILWD 689
           +  L +  K   F  HPRC  L + H+ + DDL+L SR D  SV  L++
Sbjct: 343 NICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLFSRGDVDSVSQLFE 391


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  228 bits (580), Expect = 1e-57
 Identities = 106/217 (48%), Positives = 156/217 (71%)
 Frame = +3

Query: 3    AVKEFFHSGRLLKQLNHTIISLIPKKTHSSHVGDFRPIACCNVVYKVISKILASRLSVVL 182
            AV+ FF  G L K +N TI++LIPKKT +  + D+RPI+CCNV+YKVISKI+A+RL +VL
Sbjct: 495  AVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVL 554

Query: 183  PRIIDEAQAAFVQGRSMADTVHLAQEILRQYSRKRVSPRCLMKVDLRKAYDSVSWRFLET 362
            P+ I   Q+AFV+ R + + + LA E+++ Y +  +S RC +K+D+ KA+DSV W FL  
Sbjct: 555  PKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLIN 614

Query: 363  VLRGLGCPARFLGWIMECVSTASYSIRINGDIYGLFAGRRGLRQGDPISPYLFVMCIEYL 542
            V   LG P  F+ WI  C++TAS+S+++NG++ G F   RGLRQG  +SPYLFV+C++ L
Sbjct: 615  VFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVL 674

Query: 543  SRLLRRDTKGLQFTHHPRCASLKITHLVYADDLMLLS 653
            S++L +      F +HP+C ++ +THL +ADDLM+LS
Sbjct: 675  SKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLS 711


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  226 bits (575), Expect = 4e-57
 Identities = 107/224 (47%), Positives = 153/224 (68%)
 Frame = +3

Query: 3   AVKEFFHSGRLLKQLNHTIISLIPKKTHSSHVGDFRPIACCNVVYKVISKILASRLSVVL 182
           A+K FF  G L K LN TI++LIPKK  ++ + D+RPI+CCNV+YKVISKI+A+RL V+L
Sbjct: 68  AIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVML 127

Query: 183 PRIIDEAQAAFVQGRSMADTVHLAQEILRQYSRKRVSPRCLMKVDLRKAYDSVSWRFLET 362
           P  I + Q+AFV+ R + + V LA E+++ Y +  +SPRC MK+D+ KA+DSV W+FL  
Sbjct: 128 PTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLN 187

Query: 363 VLRGLGCPARFLGWIMECVSTASYSIRINGDIYGLFAGRRGLRQGDPISPYLFVMCIEYL 542
            L  L  P  F  WI  C+STA++S+++NG++ G F  +RGLRQG  +SPYLFV+C+  L
Sbjct: 188 TLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVL 247

Query: 543 SRLLRRDTKGLQFTHHPRCASLKITHLVYADDLMLLSRADRPSV 674
           S ++          +HP+C  L +THL +ADDLM+     + SV
Sbjct: 248 SHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSV 291