BLASTX nr result

ID: Cephaelis21_contig00007027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00007027
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003846004.1| PREDICTED: LOW QUALITY PROTEIN: tubulin beta...   171   2e-58
gb|ABO61461.1| beta tubulin [Rhodomonas salina]                       139   4e-57
gb|AFN53689.1| putative tubulin beta-1 chain protein [Linum usit...   194   1e-47
ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   194   1e-47
ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   194   1e-47

>ref|XP_003846004.1| PREDICTED: LOW QUALITY PROTEIN: tubulin beta chain [Pan paniscus]
          Length = 371

 Score =  171 bits (433), Expect(2) = 2e-58
 Identities = 94/166 (56%), Positives = 104/166 (62%), Gaps = 32/166 (19%)
 Frame = -2

Query: 622 VPRAVLMNLEPGTMDSVRSGPHGQIFCPYNFVFGQSATGNNWAK*HYTDGAELNESVLDV 443
           VPRA+L++LEPGTMDSVRSGP GQIF P NFVFGQS  GNNWAK HYT+GAEL +SVLDV
Sbjct: 60  VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 119

Query: 442 VCKEAGNCDCLQGFQVCHXXXXXXXXXXXXLWISKIREEY-------------------- 323
           V KEA +CDCLQGFQ+ H            L ISKIREEY                    
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179

Query: 322 ------------LVRNADECMVLDNEALYDICFCTFKLTTPSFGDL 221
                       LV N DE   +DNEALYDICF T KLTTP++GDL
Sbjct: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDL 225



 Score = 80.5 bits (197), Expect(2) = 2e-58
 Identities = 40/67 (59%), Positives = 47/67 (70%)
 Frame = -1

Query: 206 NMSTKAVDEQMLNVQNKNSSYFVELIPNNVKSTACDIPPAGLKMASTFICNSISIQEIFH 27
           N   + +   M+    KNSSYFVE IPNNVK+  CDIPP GLKMA TFI NS +IQE+F 
Sbjct: 247 NADLRKLAVNMVPFPXKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFK 306

Query: 26  RMSEQLT 6
           R+SEQ T
Sbjct: 307 RISEQFT 313


>gb|ABO61461.1| beta tubulin [Rhodomonas salina]
          Length = 267

 Score =  139 bits (351), Expect(2) = 4e-57
 Identities = 70/100 (70%), Positives = 78/100 (78%)
 Frame = -2

Query: 622 VPRAVLMNLEPGTMDSVRSGPHGQIFCPYNFVFGQSATGNNWAK*HYTDGAELNESVLDV 443
           VPRAVLM+LEPGTMDSVR+GP+GQIF P NFVFGQ+  GNNWAK HYT+GAEL +SVLDV
Sbjct: 52  VPRAVLMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDV 111

Query: 442 VCKEAGNCDCLQGFQVCHXXXXXXXXXXXXLWISKIREEY 323
           V KEA +CDCLQGFQ+ H            L ISKIREEY
Sbjct: 112 VRKEAESCDCLQGFQISHSLGGGTGAGMGTLLISKIREEY 151



 Score =  107 bits (268), Expect(2) = 4e-57
 Identities = 52/73 (71%), Positives = 61/73 (83%)
 Frame = -1

Query: 224 SSIFFGNMSTKAVDEQMLNVQNKNSSYFVELIPNNVKSTACDIPPAGLKMASTFICNSIS 45
           +++F G MSTK VDEQMLNVQNKNSSYFVE IPNN+K++ CDIPP GLKMA  FI NS +
Sbjct: 185 AAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVNFIGNSTA 244

Query: 44  IQEIFHRMSEQLT 6
           IQE+F R+SEQ T
Sbjct: 245 IQEMFKRVSEQFT 257


>gb|AFN53689.1| putative tubulin beta-1 chain protein [Linum usitatissimum]
          Length = 449

 Score =  194 bits (492), Expect = 1e-47
 Identities = 106/166 (63%), Positives = 110/166 (66%), Gaps = 32/166 (19%)
 Frame = -2

Query: 622 VPRAVLMNLEPGTMDSVRSGPHGQIFCPYNFVFGQSATGNNWAK*HYTDGAELNESVLDV 443
           VPRAVLM+LEPGTMDSVRSGP+GQIF P NFVFGQS  GNNWAK HYT+GAEL +SVLDV
Sbjct: 60  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119

Query: 442 VCKEAGNCDCLQGFQVCHXXXXXXXXXXXXLWISKIREEY-------------------- 323
           V KEA NCDCLQGFQVCH            L ISKIREEY                    
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179

Query: 322 ------------LVRNADECMVLDNEALYDICFCTFKLTTPSFGDL 221
                       LV NADECMVLDNEALYDICF T KLTTPSFGDL
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225



 Score =  117 bits (293), Expect = 2e-24
 Identities = 58/73 (79%), Positives = 63/73 (86%)
 Frame = -1

Query: 224 SSIFFGNMSTKAVDEQMLNVQNKNSSYFVELIPNNVKSTACDIPPAGLKMASTFICNSIS 45
           S++F G MSTK VDEQM+NVQNKNSSYFVE IPNNVKST CDIPP GLKMASTFI NS S
Sbjct: 314 SAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTS 373

Query: 44  IQEIFHRMSEQLT 6
           IQE+F R+SEQ T
Sbjct: 374 IQEMFRRVSEQFT 386


>ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  194 bits (492), Expect = 1e-47
 Identities = 106/166 (63%), Positives = 110/166 (66%), Gaps = 32/166 (19%)
 Frame = -2

Query: 622 VPRAVLMNLEPGTMDSVRSGPHGQIFCPYNFVFGQSATGNNWAK*HYTDGAELNESVLDV 443
           VPRAVLM+LEPGTMDSVRSGP+GQIF P NFVFGQS  GNNWAK HYT+GAEL +SVLDV
Sbjct: 60  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119

Query: 442 VCKEAGNCDCLQGFQVCHXXXXXXXXXXXXLWISKIREEY-------------------- 323
           V KEA NCDCLQGFQVCH            L ISKIREEY                    
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179

Query: 322 ------------LVRNADECMVLDNEALYDICFCTFKLTTPSFGDL 221
                       LV NADECMVLDNEALYDICF T KLTTPSFGDL
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225



 Score =  115 bits (288), Expect = 6e-24
 Identities = 57/73 (78%), Positives = 63/73 (86%)
 Frame = -1

Query: 224 SSIFFGNMSTKAVDEQMLNVQNKNSSYFVELIPNNVKSTACDIPPAGLKMASTFICNSIS 45
           S++F G MSTK VDEQM+NVQNKNSSYFVE IP+NVKST CDIPP GLKMASTFI NS S
Sbjct: 314 SAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDIPPTGLKMASTFIGNSTS 373

Query: 44  IQEIFHRMSEQLT 6
           IQE+F R+SEQ T
Sbjct: 374 IQEMFRRVSEQFT 386


>ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  194 bits (492), Expect = 1e-47
 Identities = 106/166 (63%), Positives = 110/166 (66%), Gaps = 32/166 (19%)
 Frame = -2

Query: 622 VPRAVLMNLEPGTMDSVRSGPHGQIFCPYNFVFGQSATGNNWAK*HYTDGAELNESVLDV 443
           VPRAVLM+LEPGTMDSVRSGP+GQIF P NFVFGQS  GNNWAK HYT+GAEL +SVLDV
Sbjct: 60  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119

Query: 442 VCKEAGNCDCLQGFQVCHXXXXXXXXXXXXLWISKIREEY-------------------- 323
           V KEA NCDCLQGFQVCH            L ISKIREEY                    
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179

Query: 322 ------------LVRNADECMVLDNEALYDICFCTFKLTTPSFGDL 221
                       LV NADECMVLDNEALYDICF T KLTTPSFGDL
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225



 Score =  115 bits (288), Expect = 6e-24
 Identities = 57/73 (78%), Positives = 63/73 (86%)
 Frame = -1

Query: 224 SSIFFGNMSTKAVDEQMLNVQNKNSSYFVELIPNNVKSTACDIPPAGLKMASTFICNSIS 45
           S++F G MSTK VDEQM+NVQNKNSSYFVE IP+NVKST CDIPP GLKMASTFI NS S
Sbjct: 314 SAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDIPPTGLKMASTFIGNSTS 373

Query: 44  IQEIFHRMSEQLT 6
           IQE+F R+SEQ T
Sbjct: 374 IQEMFRRVSEQFT 386


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