BLASTX nr result

ID: Cephaelis21_contig00007006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00007006
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_680213.1| transmembrane CLPTM1 family protein [Arabidopsi...    96   4e-18
dbj|BAA97243.1| unnamed protein product [Arabidopsis thaliana]         96   4e-18
ref|XP_002871342.1| transmembrane CLPTM1 family protein [Arabido...    94   1e-17
ref|XP_002871331.1| transmembrane CLPTM1 family protein [Arabido...    94   1e-17
ref|XP_002872064.1| hypothetical protein ARALYDRAFT_489219 [Arab...    93   3e-17

>ref|NP_680213.1| transmembrane CLPTM1 family protein [Arabidopsis thaliana]
           gi|17381232|gb|AAL36035.1| AT5g08500/MAH20_6
           [Arabidopsis thaliana] gi|23506007|gb|AAN28863.1|
           At5g08500/MAH20_6 [Arabidopsis thaliana]
           gi|332005802|gb|AED93185.1| transmembrane CLPTM1 family
           protein [Arabidopsis thaliana]
          Length = 593

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 40/57 (70%), Positives = 50/57 (87%)
 Frame = -2

Query: 173 ITGIIRVAVFWYFASKFFSPKRPPNNPNQPATQISNLFHRGEPLDMWFYLSEQERFN 3
           I+GI+R+AVFWYFASKFFSPK+ P +P  P+  ++NLFH+GE LDMWFYLSEQE+FN
Sbjct: 32  ISGIVRIAVFWYFASKFFSPKQKPMDPTAPSQLMTNLFHKGESLDMWFYLSEQEKFN 88


>dbj|BAA97243.1| unnamed protein product [Arabidopsis thaliana]
          Length = 583

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 40/57 (70%), Positives = 50/57 (87%)
 Frame = -2

Query: 173 ITGIIRVAVFWYFASKFFSPKRPPNNPNQPATQISNLFHRGEPLDMWFYLSEQERFN 3
           I+GI+R+AVFWYFASKFFSPK+ P +P  P+  ++NLFH+GE LDMWFYLSEQE+FN
Sbjct: 32  ISGIVRIAVFWYFASKFFSPKQKPMDPTAPSQLMTNLFHKGESLDMWFYLSEQEKFN 88


>ref|XP_002871342.1| transmembrane CLPTM1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317179|gb|EFH47601.1| transmembrane CLPTM1
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/57 (71%), Positives = 51/57 (89%)
 Frame = -2

Query: 173 ITGIIRVAVFWYFASKFFSPKRPPNNPNQPATQISNLFHRGEPLDMWFYLSEQERFN 3
           ITGIIR+AVF YFASKFFSPK+ P++P++P+  +SNLF RGEP+DMWFYLSE E+FN
Sbjct: 30  ITGIIRIAVFCYFASKFFSPKQKPSDPSKPSHLMSNLFQRGEPMDMWFYLSEHEKFN 86


>ref|XP_002871331.1| transmembrane CLPTM1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317168|gb|EFH47590.1| transmembrane CLPTM1
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/57 (71%), Positives = 51/57 (89%)
 Frame = -2

Query: 173 ITGIIRVAVFWYFASKFFSPKRPPNNPNQPATQISNLFHRGEPLDMWFYLSEQERFN 3
           ITGIIR+AVF YFASKFFSPK+ P++P++P+  +SNLF RGEP+DMWFYLSE E+FN
Sbjct: 30  ITGIIRIAVFCYFASKFFSPKQKPSDPSKPSHLMSNLFQRGEPMDMWFYLSEHEKFN 86


>ref|XP_002872064.1| hypothetical protein ARALYDRAFT_489219 [Arabidopsis lyrata subsp.
           lyrata] gi|297317901|gb|EFH48323.1| hypothetical protein
           ARALYDRAFT_489219 [Arabidopsis lyrata subsp. lyrata]
          Length = 593

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 38/57 (66%), Positives = 50/57 (87%)
 Frame = -2

Query: 173 ITGIIRVAVFWYFASKFFSPKRPPNNPNQPATQISNLFHRGEPLDMWFYLSEQERFN 3
           I+GI+R+AVFWYFASKFFSPK+ P +P+ P+  ++NLFH+GE LDMWFYLSE ++FN
Sbjct: 32  ISGIVRIAVFWYFASKFFSPKQKPMDPSAPSQLMTNLFHKGESLDMWFYLSEHDKFN 88


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