BLASTX nr result

ID: Cephaelis21_contig00006449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006449
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like...   119   2e-24
gb|AFK47792.1| unknown [Medicago truncatula]                          116   2e-23
gb|ACJ85553.1| unknown [Medicago truncatula]                          116   2e-23
ref|XP_003602225.1| Splicing factor 3a [Medicago truncatula] gi|...   116   2e-23
gb|ACJ85663.1| unknown [Medicago truncatula]                          115   2e-23

>ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
          Length = 509

 Score =  119 bits (297), Expect = 2e-24
 Identities = 61/93 (65%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 ASSLFF-RYTPLEKLDKKHFAKGHRKAEQNGVVSSSQPGEDAKEIALMEAKLQKLCDLLD 102
           A  LF  ++TPLEKLDKKHFAKG R  E+NGV + SQ   ++KEIALMEAK+ KLCDLL+
Sbjct: 283 AERLFLTKHTPLEKLDKKHFAKGARGVEKNGVAAVSQEDGNSKEIALMEAKMTKLCDLLE 342

Query: 101 EKITQTKENVEKKQALTYEEMEAEHEEVQTESE 3
           E I +TK+NV KKQALTYEEMEAE EE +T+ +
Sbjct: 343 ETIARTKDNVVKKQALTYEEMEAEREEEETQED 375


>gb|AFK47792.1| unknown [Medicago truncatula]
          Length = 429

 Score =  116 bits (290), Expect = 2e-23
 Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 ASSLFF-RYTPLEKLDKKHFAKGHRKAEQNGVVSSSQPGEDAKEIALMEAKLQKLCDLLD 102
           A  LF  ++TPLE LDKKHFAKG R +E+NGV ++ Q G + KEIALMEAK+ KLCDLLD
Sbjct: 283 AERLFLTKHTPLEMLDKKHFAKGARGSEKNGVAAAPQDG-NLKEIALMEAKMNKLCDLLD 341

Query: 101 EKITQTKENVEKKQALTYEEMEAEHEEVQTESE 3
           E IT+TK+N+ KKQALTYEE+EAE EE +T+ +
Sbjct: 342 ETITRTKDNIVKKQALTYEEIEAEREEEETQED 374


>gb|ACJ85553.1| unknown [Medicago truncatula]
          Length = 252

 Score =  116 bits (290), Expect = 2e-23
 Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 ASSLFF-RYTPLEKLDKKHFAKGHRKAEQNGVVSSSQPGEDAKEIALMEAKLQKLCDLLD 102
           A  LF  ++TPLE LDKKHFAKG R +E+NGV ++ Q G + KEIALMEAK+ KLCDLLD
Sbjct: 27  AERLFLTKHTPLEMLDKKHFAKGARGSEKNGVAAAPQDG-NLKEIALMEAKMNKLCDLLD 85

Query: 101 EKITQTKENVEKKQALTYEEMEAEHEEVQTESE 3
           E IT+TK+N+ KKQALTYEE+EAE EE +T+ +
Sbjct: 86  ETITRTKDNIVKKQALTYEEIEAEREEEETQED 118


>ref|XP_003602225.1| Splicing factor 3a [Medicago truncatula]
           gi|355491273|gb|AES72476.1| Splicing factor 3a [Medicago
           truncatula]
          Length = 508

 Score =  116 bits (290), Expect = 2e-23
 Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 ASSLFF-RYTPLEKLDKKHFAKGHRKAEQNGVVSSSQPGEDAKEIALMEAKLQKLCDLLD 102
           A  LF  ++TPLE LDKKHFAKG R +E+NGV ++ Q G + KEIALMEAK+ KLCDLLD
Sbjct: 283 AERLFLTKHTPLEMLDKKHFAKGARGSEKNGVAAAPQDG-NLKEIALMEAKMNKLCDLLD 341

Query: 101 EKITQTKENVEKKQALTYEEMEAEHEEVQTESE 3
           E IT+TK+N+ KKQALTYEE+EAE EE +T+ +
Sbjct: 342 ETITRTKDNIVKKQALTYEEIEAEREEEETQED 374


>gb|ACJ85663.1| unknown [Medicago truncatula]
          Length = 368

 Score =  115 bits (289), Expect = 2e-23
 Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 ASSLFF-RYTPLEKLDKKHFAKGHRKAEQNGVVSSSQPGEDAKEIALMEAKLQKLCDLLD 102
           A  LF  ++TPLE LDKKHFAKG R +E+NGV ++ Q G + KE+ALMEAK+ KLCDLLD
Sbjct: 143 AERLFLTKHTPLEMLDKKHFAKGARGSEKNGVAAAPQDG-NLKEVALMEAKMNKLCDLLD 201

Query: 101 EKITQTKENVEKKQALTYEEMEAEHEEVQTESE 3
           E IT+TK+N+ KKQALTYEE+EAE EE +T+ +
Sbjct: 202 ETITRTKDNIVKKQALTYEEIEAEREEEETQED 234


Top