BLASTX nr result
ID: Cephaelis21_contig00006319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00006319
(1019 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,... 284 2e-74
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2... 262 1e-67
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi... 260 4e-67
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar... 199 7e-49
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c... 199 7e-49
>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 284 bits (727), Expect = 2e-74
Identities = 158/342 (46%), Positives = 212/342 (61%), Gaps = 3/342 (0%)
Frame = +3
Query: 3 KNSKQSSWPPTNWRLQVQETQLISQVSKILLQRQTKYWEXXXXXXXXXXXXXXXXFLRIL 182
+ + +S +WR ++Q+ QL+S++S ILLQR W F +IL
Sbjct: 31 RKTYSTSTSKISWRTRIQQNQLVSEISTILLQRNN--WIPLLQNLNLSSKLTPFLFFQIL 88
Query: 183 QKTQPSPQISLDFFNWAKKNLRFQPDLKSHCKLTHLLFESGLSGLAKPVLASIIQSYPSD 362
KTQ QISL+FFNWAK NL F PDLKS C + L S L AK +L S+I++YPS+
Sbjct: 89 HKTQTHAQISLNFFNWAKTNLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIKTYPSN 148
Query: 363 EIVSSFSKVANFDTYSSVLCS---VLKGYCNRGLYWEALKVYVKAKESGHGVISVHVFNS 533
+ + + SS+LC+ VL+ Y ++G + E L+VY K + G SVH N
Sbjct: 149 LFLETMVQACRGK--SSLLCTLNFVLEFYSHKGSFLEGLEVYKKMRVIGC-TPSVHACNV 205
Query: 534 LLHLLQVQNETRLAWCVYSSMIRHVVSENQFTWPIIARILCKDAKFERIGRILDMGINSS 713
LL LQ ++E RLAWC Y +MIR V ++FTW ++A ILCKD FERI ++LDMGI +S
Sbjct: 206 LLDALQRESEIRLAWCFYCAMIRVGVLPDKFTWSLVAHILCKDGNFERIVKLLDMGICNS 265
Query: 714 SLYDLIVQNYSERGDFDAAFGYLGKMYDKKLDPSFSIYSSILDGACKCGDTEVIEMVTRT 893
+Y+ +V YS+ GDF AAF L +MYD+K++P FS YSSILDGACKC + +VIE V
Sbjct: 266 VMYNAVVDYYSKNGDFKAAFCRLNEMYDRKVEPGFSTYSSILDGACKCRNLQVIERVVAI 325
Query: 894 MIEKGYIPKGVTSKYDSVIQKLSDLGKTYAAKLFLSRACVEK 1019
M+ K + K +S YDS+IQKL DLGK AA LF RAC E+
Sbjct: 326 MVGKQLLSKCPSSDYDSIIQKLCDLGKVSAATLFFKRACDER 367
>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
predicted protein [Populus trichocarpa]
Length = 564
Score = 262 bits (669), Expect = 1e-67
Identities = 143/328 (43%), Positives = 206/328 (62%), Gaps = 1/328 (0%)
Frame = +3
Query: 39 WRLQVQETQLISQVSKILLQRQTKYWEXXXXXXXXXXXXXXXXFLRILQKTQPSPQISLD 218
WR+Q+++ QL+ Q+S ILLQR W F +IL KTQ +PQISL
Sbjct: 14 WRIQIRQNQLVFQISSILLQRHN--WVSLLQNFNLSTKLTPPLFNQILHKTQTNPQISLR 71
Query: 219 FFNWAKKNLRFQPDLKSHCKLTHLLFESGLSGLAKPVLASIIQSYPSDEIVSSFSKVANF 398
FFNW + NL+ +PDLKS C + ++ SGL+ +P++ S+++++ + +
Sbjct: 72 FFNWVQTNLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVLGEAMVDSCRG 131
Query: 399 DTYSSVLCS-VLKGYCNRGLYWEALKVYVKAKESGHGVISVHVFNSLLHLLQVQNETRLA 575
+ S S VL+ Y ++GL+ E+L+++ K + +G + S NS+L +LQ +NE +LA
Sbjct: 132 KSLKSDAFSFVLECYSHKGLFMESLEMFRKMRGNGF-IASGTACNSVLDVLQRENEIKLA 190
Query: 576 WCVYSSMIRHVVSENQFTWPIIARILCKDAKFERIGRILDMGINSSSLYDLIVQNYSERG 755
WC Y +MI+ V ++ TW +IA+ILCKD FERI + LDMG+ +S LY+ ++ S+RG
Sbjct: 191 WCFYCAMIKDGVLPDKLTWSLIAQILCKDGNFERIVKFLDMGVYNSVLYNGVIDCCSKRG 250
Query: 756 DFDAAFGYLGKMYDKKLDPSFSIYSSILDGACKCGDTEVIEMVTRTMIEKGYIPKGVTSK 935
DF+AAF L +M ++KLDP FS YS+ILDGACK G+ EVIE V M EKG +PK S+
Sbjct: 251 DFEAAFERLNQMCERKLDPGFSTYSAILDGACKHGNEEVIERVMDIMAEKGLLPKCPLSQ 310
Query: 936 YDSVIQKLSDLGKTYAAKLFLSRACVEK 1019
DSVIQK SDL K A +F RAC EK
Sbjct: 311 CDSVIQKFSDLCKMNVATMFFRRACDEK 338
>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
[Vitis vinifera]
Length = 569
Score = 260 bits (664), Expect = 4e-67
Identities = 152/340 (44%), Positives = 212/340 (62%), Gaps = 2/340 (0%)
Frame = +3
Query: 6 NSKQSSWPPTNWRLQVQETQLISQVSKILLQRQTKYWEXXXXXXXXXXXXXXXXFLRILQ 185
N S P NWR Q+++ QLISQ+S ILLQR W F +IL
Sbjct: 11 NQFSKSTTPLNWRAQIKQNQLISQISSILLQRHN--WVTLLRNFNLSSKLTPSLFHQILL 68
Query: 186 KTQPSPQISLDFFNWAKKNLRFQPDLKSHCKLTHLLFESGLSGLAKPVLASIIQSYPSDE 365
KTQ +PQ SL FFNW + NL FQPDL +H ++ + +SGL AK +L S+I++
Sbjct: 69 KTQKNPQSSLSFFNWVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIETQKVSV 128
Query: 366 IVSSFSKVANF-DTYSSVLCSVLKGYCNRGLYWEALKVYVKAKESGHGVISVHVFNSLLH 542
+V S + D+ S VL VL+ Y ++GL+ EAL+V+ + G+ V SV N+LL
Sbjct: 129 LVDSVIQACRGKDSESPVLGFVLECYSSKGLFIEALEVFRRITIHGY-VPSVRSCNALLD 187
Query: 543 LLQVQNETRLAWCVYSSMIRHVVSENQFTWPIIARILCKDAKFERIGRILDMGINSSSL- 719
LQ +NE +LAWCV ++IR+ V + IA ILCK+ K ER+ R+LDM I ++L
Sbjct: 188 SLQRENEIKLAWCVCGALIRNGVLPDYVR---IALILCKNGKLERVVRLLDMSIVCNALI 244
Query: 720 YDLIVQNYSERGDFDAAFGYLGKMYDKKLDPSFSIYSSILDGACKCGDTEVIEMVTRTMI 899
Y L++ Y ERG+F AAF YL +M ++K DP F Y+SILDGACK + EVI++V +M+
Sbjct: 245 YKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGACKYENDEVIQIVMGSMV 304
Query: 900 EKGYIPKGVTSKYDSVIQKLSDLGKTYAAKLFLSRACVEK 1019
EKG +PK + S+YDS+IQK+ +LGKT+AA++F RA EK
Sbjct: 305 EKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEK 344
>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 199 bits (507), Expect = 7e-49
Identities = 109/328 (33%), Positives = 192/328 (58%), Gaps = 2/328 (0%)
Frame = +3
Query: 33 TNWRLQVQETQLISQVSKILLQRQTKYWEXXXXXXXXXXXXXXXX-FLRILQKTQPSPQI 209
++W+ Q ++ +++S ILLQR+ FL+IL++T+ P+
Sbjct: 26 SDWKTQQTLFRVATEISSILLQRRNWITHLQYVKSKLPRSTLTSPVFLQILRETRKCPKT 85
Query: 210 SLDFFNWAKKNLRFQPDLKSHCKLTHLLFESGLSGLAKPVLASIIQSYPSDEIVSSFSKV 389
+LDFF++AK +LRF+PDLKSHC++ + ESGL A+ +L ++++ +V +
Sbjct: 86 TLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVGEMHRW 145
Query: 390 ANFDTYSSVLCS-VLKGYCNRGLYWEALKVYVKAKESGHGVISVHVFNSLLHLLQVQNET 566
+ SV S VL+ Y +G + L+V+ + S +NSLL L +N+
Sbjct: 146 FEGEVSLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSP-SQSAYNSLLGSLVKENQF 204
Query: 567 RLAWCVYSSMIRHVVSENQFTWPIIARILCKDAKFERIGRILDMGINSSSLYDLIVQNYS 746
R+A C+YS+M+R+ + ++ TW +IA+ILC+ + + + ++++ G+ S +Y +V+ YS
Sbjct: 205 RVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECYS 264
Query: 747 ERGDFDAAFGYLGKMYDKKLDPSFSIYSSILDGACKCGDTEVIEMVTRTMIEKGYIPKGV 926
G+FDA F + +M DKKL+ SF Y +LD AC+ GD E I+ V M+EK ++ G
Sbjct: 265 RNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLGD 324
Query: 927 TSKYDSVIQKLSDLGKTYAAKLFLSRAC 1010
++ D +I++L D+GKT+A+++ +AC
Sbjct: 325 SAVNDKIIERLCDMGKTFASEMLFRKAC 352
>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 199 bits (507), Expect = 7e-49
Identities = 109/328 (33%), Positives = 192/328 (58%), Gaps = 2/328 (0%)
Frame = +3
Query: 33 TNWRLQVQETQLISQVSKILLQRQTKYWEXXXXXXXXXXXXXXXX-FLRILQKTQPSPQI 209
++W+ Q ++ +++S ILLQR+ FL+IL++T+ P+
Sbjct: 26 SDWKTQQTLFRVATEISSILLQRRNWITHLQYVKSKLPRSTLTSPVFLQILRETRKCPKT 85
Query: 210 SLDFFNWAKKNLRFQPDLKSHCKLTHLLFESGLSGLAKPVLASIIQSYPSDEIVSSFSKV 389
+LDFF++AK +LRF+PDLKSHC++ + ESGL A+ +L ++++ +V +
Sbjct: 86 TLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVGEMHRW 145
Query: 390 ANFDTYSSVLCS-VLKGYCNRGLYWEALKVYVKAKESGHGVISVHVFNSLLHLLQVQNET 566
+ SV S VL+ Y +G + L+V+ + S +NSLL L +N+
Sbjct: 146 FEGEVSLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSP-SQSAYNSLLGSLVKENQF 204
Query: 567 RLAWCVYSSMIRHVVSENQFTWPIIARILCKDAKFERIGRILDMGINSSSLYDLIVQNYS 746
R+A C+YS+M+R+ + ++ TW +IA+ILC+ + + + ++++ G+ S +Y +V+ YS
Sbjct: 205 RVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECYS 264
Query: 747 ERGDFDAAFGYLGKMYDKKLDPSFSIYSSILDGACKCGDTEVIEMVTRTMIEKGYIPKGV 926
G+FDA F + +M DKKL+ SF Y +LD AC+ GD E I+ V M+EK ++ G
Sbjct: 265 RNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLGD 324
Query: 927 TSKYDSVIQKLSDLGKTYAAKLFLSRAC 1010
++ D +I++L D+GKT+A+++ +AC
Sbjct: 325 SAVNDKIIERLCDMGKTFASEMLFRKAC 352