BLASTX nr result

ID: Cephaelis21_contig00005198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005198
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi...   152   3e-35
ref|NP_178532.2| Ribonuclease Z [Arabidopsis thaliana] gi|410177...   151   6e-35
gb|AAD25827.1| hypothetical protein [Arabidopsis thaliana]            151   6e-35
ref|XP_002883646.1| hypothetical protein ARALYDRAFT_480092 [Arab...   150   1e-34
ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33

>ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera]
           gi|297739240|emb|CBI28891.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/83 (85%), Positives = 80/83 (96%)
 Frame = +1

Query: 1   GETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLMKQYVHLKGQQIEKLKKSGIEITDT 180
           GETYE+RN+LVVRPFKTHHVIPSQGYVIY+VRKKL KQY+HLKG+QIEKLK SGIEITDT
Sbjct: 184 GETYEMRNNLVVRPFKTHHVIPSQGYVIYTVRKKLKKQYIHLKGKQIEKLKNSGIEITDT 243

Query: 181 ILCPELAFTGDTKSDFLLDPRNA 249
           IL PE+AFTGDT+SDF+L+PRNA
Sbjct: 244 ILSPEVAFTGDTRSDFMLEPRNA 266


>ref|NP_178532.2| Ribonuclease Z [Arabidopsis thaliana]
           gi|41017757|sp|Q8L633.1|RNZC_ARATH RecName:
           Full=Ribonuclease Z, chloroplastic; Short=RNase Z;
           AltName: Full=Zinc phosphodiesterase CPZ; AltName:
           Full=tRNA 3 endonuclease; AltName: Full=tRNase Z; Flags:
           Precursor gi|20466197|gb|AAM20416.1| unknown protein
           [Arabidopsis thaliana] gi|24899839|gb|AAN65134.1|
           unknown protein [Arabidopsis thaliana]
           gi|330250749|gb|AEC05843.1| Ribonuclease Z [Arabidopsis
           thaliana]
          Length = 354

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/83 (84%), Positives = 78/83 (93%)
 Frame = +1

Query: 1   GETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLMKQYVHLKGQQIEKLKKSGIEITDT 180
           GETYELRND+VVRPF THHVIPSQGYVIYSVRKKL KQY HLKG+QIEK+KKSG+EITDT
Sbjct: 184 GETYELRNDIVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDT 243

Query: 181 ILCPELAFTGDTKSDFLLDPRNA 249
           IL PE+AFTGDT S+++LDPRNA
Sbjct: 244 ILSPEIAFTGDTTSEYMLDPRNA 266


>gb|AAD25827.1| hypothetical protein [Arabidopsis thaliana]
          Length = 356

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/83 (84%), Positives = 78/83 (93%)
 Frame = +1

Query: 1   GETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLMKQYVHLKGQQIEKLKKSGIEITDT 180
           GETYELRND+VVRPF THHVIPSQGYVIYSVRKKL KQY HLKG+QIEK+KKSG+EITDT
Sbjct: 184 GETYELRNDIVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDT 243

Query: 181 ILCPELAFTGDTKSDFLLDPRNA 249
           IL PE+AFTGDT S+++LDPRNA
Sbjct: 244 ILSPEIAFTGDTTSEYMLDPRNA 266


>ref|XP_002883646.1| hypothetical protein ARALYDRAFT_480092 [Arabidopsis lyrata subsp.
           lyrata] gi|297329486|gb|EFH59905.1| hypothetical protein
           ARALYDRAFT_480092 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/83 (83%), Positives = 78/83 (93%)
 Frame = +1

Query: 1   GETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLMKQYVHLKGQQIEKLKKSGIEITDT 180
           GETYELRND+VVRPF THHVIPSQGYVIYSVRKKL KQY HLKG+QIEK+KKSG+EITDT
Sbjct: 183 GETYELRNDIVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDT 242

Query: 181 ILCPELAFTGDTKSDFLLDPRNA 249
           IL PE+AFTGDT ++++LDPRNA
Sbjct: 243 ILSPEIAFTGDTTAEYMLDPRNA 265


>ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|222861931|gb|EEE99473.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/83 (81%), Positives = 78/83 (93%)
 Frame = +1

Query: 1   GETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLMKQYVHLKGQQIEKLKKSGIEITDT 180
           GETYELRND+VVRPF+T HVIPSQGYVIYSVRKKL KQY+HLKG+QIEKLKKSG+EITD 
Sbjct: 196 GETYELRNDVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYIHLKGKQIEKLKKSGVEITDI 255

Query: 181 ILCPELAFTGDTKSDFLLDPRNA 249
           IL PE+AFTGDT ++++LDPRNA
Sbjct: 256 ILSPEVAFTGDTTAEYMLDPRNA 278


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