BLASTX nr result

ID: Cephaelis21_contig00005004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005004
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ...    57   3e-09
ref|NP_001058533.2| Os06g0708300 [Oryza sativa Japonica Group] g...    54   3e-09
ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-09
ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi...    56   6e-09
ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-09

>ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus]
           gi|449496096|ref|XP_004160038.1| PREDICTED: protein
           RER1B-like [Cucumis sativus]
          Length = 194

 Score = 56.6 bits (135), Expect(2) = 3e-09
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +3

Query: 117 ILLCY*IVLFVLTMKRQIMHMIKYKYILFNL 209
           ILLCY IVLFVLTMKRQIMHMIKYKYI F++
Sbjct: 144 ILLCYWIVLFVLTMKRQIMHMIKYKYIPFSI 174



 Score = 29.6 bits (65), Expect(2) = 3e-09
 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
 Frame = +2

Query: 47  YANTKALCVAFLMTF-------V*CPCLFSHTIVL 130
           YA TKA C+AFLMTF       V  P L  + IVL
Sbjct: 118 YAITKAFCIAFLMTFFSLFDVPVFWPILLCYWIVL 152


>ref|NP_001058533.2| Os06g0708300 [Oryza sativa Japonica Group]
           gi|255677385|dbj|BAF20447.2| Os06g0708300 [Oryza sativa
           Japonica Group]
          Length = 99

 Score = 54.3 bits (129), Expect(2) = 3e-09
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = +3

Query: 117 ILLCY*IVLFVLTMKRQIMHMIKYKYILFNL 209
           ILLCY +VLFVLTMKRQI+HMIKYKY+ F++
Sbjct: 62  ILLCYWVVLFVLTMKRQIVHMIKYKYVPFSI 92



 Score = 31.6 bits (70), Expect(2) = 3e-09
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 44 RYANTKALCVAFLMTF 91
          RYA TKA CVAFLMTF
Sbjct: 35 RYAITKAFCVAFLMTF 50


>ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|222857113|gb|EEE94660.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 55.5 bits (132), Expect(2) = 4e-09
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 117 ILLCY*IVLFVLTMKRQIMHMIKYKYILFN 206
           ILLCY IVLFVLTMKRQIMHMIKYKY+ F+
Sbjct: 144 ILLCYWIVLFVLTMKRQIMHMIKYKYVPFS 173



 Score = 30.0 bits (66), Expect(2) = 4e-09
 Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
 Frame = +2

Query: 47  YANTKALCVAFLMTF-------V*CPCLFSHTIVL 130
           YA TKA CVAFLMTF       V  P L  + IVL
Sbjct: 118 YAITKAFCVAFLMTFFSVFDVPVFWPILLCYWIVL 152


>ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera]
           gi|302142515|emb|CBI19718.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score = 56.2 bits (134), Expect(2) = 6e-09
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +3

Query: 117 ILLCY*IVLFVLTMKRQIMHMIKYKYILFNL 209
           ILLCY IVLFVLTMKRQIMHMIKYKY+ F++
Sbjct: 144 ILLCYWIVLFVLTMKRQIMHMIKYKYVPFSI 174



 Score = 28.9 bits (63), Expect(2) = 6e-09
 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
 Frame = +2

Query: 47  YANTKALCVAFLMTF-------V*CPCLFSHTIVL 130
           Y+ TKA CVAFLMTF       V  P L  + IVL
Sbjct: 118 YSITKAFCVAFLMTFFSVFDVPVFWPILLCYWIVL 152


>ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 55.1 bits (131), Expect(2) = 6e-09
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +3

Query: 117 ILLCY*IVLFVLTMKRQIMHMIKYKYILFNL 209
           ILLCY IVLFVLTMKRQ+MHM+KYKY+ F+L
Sbjct: 144 ILLCYWIVLFVLTMKRQLMHMMKYKYVPFSL 174



 Score = 30.0 bits (66), Expect(2) = 6e-09
 Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
 Frame = +2

Query: 47  YANTKALCVAFLMTF-------V*CPCLFSHTIVL 130
           YA TKA CVAFLMTF       V  P L  + IVL
Sbjct: 118 YAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVL 152


Top