BLASTX nr result

ID: Cephaelis21_contig00004488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004488
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301496.1| predicted protein [Populus trichocarpa] gi|2...    96   6e-18
ref|XP_002320986.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_002314923.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002887094.1| hypothetical protein ARALYDRAFT_475797 [Arab...    82   1e-13
ref|XP_004169000.1| PREDICTED: zinc finger protein 6-like [Cucum...    81   1e-13

>ref|XP_002301496.1| predicted protein [Populus trichocarpa] gi|222843222|gb|EEE80769.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 53/134 (39%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
 Frame = +3

Query: 150 EVKLFGYPVTQWGKRPVSGHHHDMENKKFECQYCHREFANSQALGGHQNAHKKERQKLKR 329
           ++KLFG+P+T+     +S   + +EN+KFEC +CHR FANSQALGGHQNAHK+ER++ +R
Sbjct: 18  KLKLFGFPLTEQDDEILSKTENSLENRKFECHFCHRAFANSQALGGHQNAHKRERERARR 77

Query: 330 VQFINDRNQQFGTNSSTMPVIGRHATRSRTFFCATVPPSGMSLSSCI---APRFRLQADQ 500
             ++ DR        +  PV+  HA +        +PPS + +S+ I   A +FR Q   
Sbjct: 78  NHYLCDRRFM-----AAAPVVCSHAVK--------LPPSRLIISNNITAAAAKFRPQLAS 124

Query: 501 CYLAYPTQVLSGIP 542
            Y + P   L   P
Sbjct: 125 DYPSQPLLFLPSSP 138


>ref|XP_002320986.1| predicted protein [Populus trichocarpa] gi|222861759|gb|EEE99301.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 55/142 (38%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
 Frame = +3

Query: 150 EVKLFGYPVTQWGKRPVSGHHHDMENKKFECQYCHREFANSQALGGHQNAHKKERQKLKR 329
           ++KLFG+P+T+  +  +S   + + N+KFEC +CHR FANSQALGGHQNAHK+ERQ+ +R
Sbjct: 18  KLKLFGFPLTEQDEI-LSKTENTLGNRKFECHFCHRAFANSQALGGHQNAHKRERQRARR 76

Query: 330 VQFINDRNQQFGTNSSTMPVIGRHATRSRTFFCATVPPSGM--SLSSCIAPRFRLQADQC 503
            Q++ DR       ++   V+  HA +S       + P G+  S S+  A  FR Q    
Sbjct: 77  AQYLCDRRL-----TAAAQVLCSHAVKSPPL----IYPRGLITSNSTAAAVEFRPQIASD 127

Query: 504 YLAYPTQVLSGIPLRYHSANQL 569
           Y + P  +    P  +HS +Q+
Sbjct: 128 YPSQPL-LFPSSPPDHHSPSQI 148


>ref|XP_002314923.1| predicted protein [Populus trichocarpa] gi|222863963|gb|EEF01094.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/101 (47%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
 Frame = +3

Query: 144 PPE--VKLFGYPVTQWGKRPVSGHHHDMEN-KKFECQYCHREFANSQALGGHQNAHKKER 314
           PP   +KL G+ V ++ +   +    ++E  KKFECQYCHR FANSQALGGHQNAHK+ER
Sbjct: 16  PPSSTLKLLGFSVKRYQEELPATTPFNIEYIKKFECQYCHRGFANSQALGGHQNAHKRER 75

Query: 315 QKLKR-VQFINDRNQQFGTNSSTMPVIGRHATRSRTFFCAT 434
           Q+ KR + F  D   Q        P+I  HA RS    CA+
Sbjct: 76  QRAKRALYFFKDHQHQ--RIKPAGPIINAHAARSGPLICAS 114


>ref|XP_002887094.1| hypothetical protein ARALYDRAFT_475797 [Arabidopsis lyrata subsp.
           lyrata] gi|297332935|gb|EFH63353.1| hypothetical protein
           ARALYDRAFT_475797 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/79 (54%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
 Frame = +3

Query: 132 LATSPPEVKLFGYPV------TQWGKRPVSGHHHDMENKKFECQYCHREFANSQALGGHQ 293
           +AT    +KLFG  +      T     P SG     E++K+ECQYC REFANSQALGGHQ
Sbjct: 1   MATETSSLKLFGINLLETTSDTNRSSEPRSGPGTGSESRKYECQYCCREFANSQALGGHQ 60

Query: 294 NAHKKERQKLKRVQFINDR 350
           NAHKKERQ LKR Q +  R
Sbjct: 61  NAHKKERQLLKRAQMLATR 79


>ref|XP_004169000.1| PREDICTED: zinc finger protein 6-like [Cucumis sativus]
          Length = 229

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 54/125 (43%), Positives = 66/125 (52%), Gaps = 15/125 (12%)
 Frame = +3

Query: 129 SLATSPPEVKLFGYPVTQ--------WGKRPV----SGHHHDMENKKFECQYCHREFANS 272
           S +T+P ++KLFG+ V +          K P     SG      ++K+ECQYC REFANS
Sbjct: 9   SNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREFANS 68

Query: 273 QALGGHQNAHKKERQKLKRVQFINDRNQQFGTNSSTMPVIGRHATRSR---TFFCATVPP 443
           QALGGHQNAHKKERQ+LKR Q    RN       +  P+I   A       T   A  PP
Sbjct: 69  QALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRN--PIISAFAPPPHLLATTAAAAAPP 126

Query: 444 SGMSL 458
            G  L
Sbjct: 127 GGQFL 131


Top