BLASTX nr result
ID: Cephaelis21_contig00004406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00004406
(1442 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago... 135 2e-54
ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni... 141 3e-54
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera] 141 3e-54
ref|XP_002530707.1| DNA polymerase delta small subunit, putative... 137 8e-54
ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subuni... 137 3e-53
>ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago truncatula]
gi|355500275|gb|AES81478.1| DNA polymerase delta small
subunit [Medicago truncatula]
Length = 454
Score = 135 bits (339), Expect(2) = 2e-54
Identities = 71/138 (51%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Frame = +1
Query: 955 STDQSRLSNPIEELDIMLTLI--GVPVDIMPGPHDPANFALLXXXXXXXXXXXXXXXXXX 1128
S D S+++ P++ELDIML I G+P+DIMPGP DPANF+L
Sbjct: 241 SKDLSKMAEPVKELDIMLNQIAAGLPLDIMPGPCDPANFSL------------------- 281
Query: 1129 XXXXXXXXXCLFPGSLAFNTFR*YPNPHWFKLDEVSLLGIAGQNIDDLEKYSEGNDKLDF 1308
CLFPGS +NTF+ NPH F+LD + LG +GQN+DDLEKYSE DKLDF
Sbjct: 282 --PQQALHKCLFPGSSVYNTFKSCTNPHCFELDGIRFLGTSGQNVDDLEKYSEAKDKLDF 339
Query: 1309 LEGTLRWRQLFPPAPNTL 1362
+E TLRWR L P APNTL
Sbjct: 340 MERTLRWRHLAPTAPNTL 357
Score = 105 bits (263), Expect(2) = 2e-54
Identities = 55/73 (75%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = +2
Query: 755 EDKYVILVSGLDVGSS-SNPLLFQLLVDHITGHLGYEKEQRFVAKIVQVVIAGNCVELPP 931
EDKYV+LVSGL VGSS SNPL FQLLVDHITGHLG EKEQ A+IV+VVIAGN VE+P
Sbjct: 172 EDKYVVLVSGLSVGSSKSNPLQFQLLVDHITGHLGDEKEQSIAAQIVRVVIAGNSVEMPR 231
Query: 932 GLLNGQNVLQTNL 970
GLLNGQN++ +L
Sbjct: 232 GLLNGQNLVSKDL 244
>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
gi|297739835|emb|CBI30017.3| unnamed protein product
[Vitis vinifera]
Length = 439
Score = 141 bits (355), Expect(2) = 3e-54
Identities = 75/138 (54%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Frame = +1
Query: 955 STDQSRLSNPIEELDIMLTLI--GVPVDIMPGPHDPANFALLXXXXXXXXXXXXXXXXXX 1128
S DQSRLS PI+ELDI+LT I G+P+DIMPGP DPANF+L
Sbjct: 247 SKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSL------------------- 287
Query: 1129 XXXXXXXXXCLFPGSLAFNTFR*YPNPHWFKLDEVSLLGIAGQNIDDLEKYSEGNDKLDF 1308
CLFPGS A+N+FR NPH F+L+ + LG +GQN+DDLEKYSE DKL+F
Sbjct: 288 --PQQPLHRCLFPGSSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEF 345
Query: 1309 LEGTLRWRQLFPPAPNTL 1362
+E TLRWR L P APNTL
Sbjct: 346 MERTLRWRHLAPTAPNTL 363
Score = 99.0 bits (245), Expect(2) = 3e-54
Identities = 52/68 (76%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Frame = +2
Query: 755 EDKYVILVSGLDVGSS-SNPLLFQLLVDHITGHLGYEKEQRFVAKIVQVVIAGNCVELPP 931
EDKYV+ VSGL VGSS SNPL FQLLVDHITGHLG EKEQ A+IV VVIAGN V +P
Sbjct: 178 EDKYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPR 237
Query: 932 GLLNGQNV 955
GLLNGQN+
Sbjct: 238 GLLNGQNL 245
>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
Length = 439
Score = 141 bits (355), Expect(2) = 3e-54
Identities = 75/138 (54%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Frame = +1
Query: 955 STDQSRLSNPIEELDIMLTLI--GVPVDIMPGPHDPANFALLXXXXXXXXXXXXXXXXXX 1128
S DQSRLS PI+ELDI+LT I G+P+DIMPGP DPANF+L
Sbjct: 247 SKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSL------------------- 287
Query: 1129 XXXXXXXXXCLFPGSLAFNTFR*YPNPHWFKLDEVSLLGIAGQNIDDLEKYSEGNDKLDF 1308
CLFPGS A+N+FR NPH F+L+ + LG +GQN+DDLEKYSE DKL+F
Sbjct: 288 --PQQPLHRCLFPGSSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEF 345
Query: 1309 LEGTLRWRQLFPPAPNTL 1362
+E TLRWR L P APNTL
Sbjct: 346 MERTLRWRHLAPTAPNTL 363
Score = 99.0 bits (245), Expect(2) = 3e-54
Identities = 52/68 (76%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Frame = +2
Query: 755 EDKYVILVSGLDVGSS-SNPLLFQLLVDHITGHLGYEKEQRFVAKIVQVVIAGNCVELPP 931
EDKYV+ VSGL VGSS SNPL FQLLVDHITGHLG EKEQ A+IV VVIAGN V +P
Sbjct: 178 EDKYVVFVSGLSVGSSXSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPR 237
Query: 932 GLLNGQNV 955
GLLNGQN+
Sbjct: 238 GLLNGQNL 245
>ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
gi|223529721|gb|EEF31661.1| DNA polymerase delta small
subunit, putative [Ricinus communis]
Length = 425
Score = 137 bits (344), Expect(2) = 8e-54
Identities = 73/138 (52%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Frame = +1
Query: 955 STDQSRLSNPIEELDIMLTLIG--VPVDIMPGPHDPANFALLXXXXXXXXXXXXXXXXXX 1128
S DQSRLS P++ELDI L+ I +P+DIMPG +DPANF+L
Sbjct: 247 SKDQSRLSEPVKELDIFLSQIAASMPMDIMPGSNDPANFSL------------------- 287
Query: 1129 XXXXXXXXXCLFPGSLAFNTFR*YPNPHWFKLDEVSLLGIAGQNIDDLEKYSEGNDKLDF 1308
CLFPGS A+NTFR NPH F+LD + LG +GQNIDDLEKYSE DKL+F
Sbjct: 288 --PQQPLHRCLFPGSAAYNTFRSCTNPHCFELDNIRFLGTSGQNIDDLEKYSEAKDKLEF 345
Query: 1309 LEGTLRWRQLFPPAPNTL 1362
+E TL+WR L P APNTL
Sbjct: 346 MERTLKWRHLAPTAPNTL 363
Score = 101 bits (252), Expect(2) = 8e-54
Identities = 52/68 (76%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Frame = +2
Query: 755 EDKYVILVSGLDVGSSS-NPLLFQLLVDHITGHLGYEKEQRFVAKIVQVVIAGNCVELPP 931
EDKYV+ VSGL+VGSS+ NPL FQLLVDHITGHLG EKEQ A+IV VVIAGN VE+P
Sbjct: 178 EDKYVVFVSGLNVGSSTFNPLQFQLLVDHITGHLGNEKEQAIAAEIVHVVIAGNSVEIPH 237
Query: 932 GLLNGQNV 955
GLLNGQN+
Sbjct: 238 GLLNGQNL 245
>ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
Length = 433
Score = 137 bits (346), Expect(2) = 3e-53
Identities = 73/138 (52%), Positives = 88/138 (63%), Gaps = 2/138 (1%)
Frame = +1
Query: 955 STDQSRLSNPIEELDIMLTLI--GVPVDIMPGPHDPANFALLXXXXXXXXXXXXXXXXXX 1128
S D SR++ PI+ELDI+L+ I G+P+DIMPGP DPANF+L
Sbjct: 241 SKDLSRMAEPIKELDILLSQIAAGLPLDIMPGPSDPANFSL------------------- 281
Query: 1129 XXXXXXXXXCLFPGSLAFNTFR*YPNPHWFKLDEVSLLGIAGQNIDDLEKYSEGNDKLDF 1308
CLFPGS A+NTFR NPH F++D V LG +GQN+DDLEKYSE DKL+F
Sbjct: 282 --PQQSLHRCLFPGSSAYNTFRSCTNPHCFEVDNVRFLGTSGQNVDDLEKYSEAKDKLEF 339
Query: 1309 LEGTLRWRQLFPPAPNTL 1362
+E TLRWR L P APNTL
Sbjct: 340 MERTLRWRHLAPTAPNTL 357
Score = 99.0 bits (245), Expect(2) = 3e-53
Identities = 51/73 (69%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Frame = +2
Query: 755 EDKYVILVSGLDVGSSS-NPLLFQLLVDHITGHLGYEKEQRFVAKIVQVVIAGNCVELPP 931
EDKYV+LVSGL VGSSS NPL FQLL+DHITGHLG EKEQ ++IV+VV AGN VE+P
Sbjct: 172 EDKYVVLVSGLSVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIVRVVFAGNLVEIPR 231
Query: 932 GLLNGQNVLQTNL 970
LLNGQN+ +L
Sbjct: 232 RLLNGQNLASKDL 244