BLASTX nr result

ID: Cephaelis21_contig00004319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004319
         (2537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...    64   1e-15
ref|XP_002526002.1| protein with unknown function [Ricinus commu...    61   2e-14
ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup1...    59   2e-13
ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag...    55   8e-13
ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup1...    57   2e-12

>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis
           vinifera]
          Length = 1496

 Score = 64.3 bits (155), Expect(2) = 1e-15
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = -2

Query: 298 AGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYS 197
           AGLGDLTGSIL GTGSD+GAGD SMVRNLFG+YS
Sbjct: 735 AGLGDLTGSILYGTGSDLGAGDNSMVRNLFGAYS 768



 Score = 47.4 bits (111), Expect(2) = 1e-15
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 195 RNLESIDGGSSRKRQRLPHSSAELAAMEVRLISS*CIDLLYITS 64
           R++E  DGG+S KRQRLP+S AELAAMEVR +   CI  L + S
Sbjct: 769 RSIEPGDGGTSNKRQRLPYSPAELAAMEVRAME--CIRQLLLRS 810


>ref|XP_002526002.1| protein with unknown function [Ricinus communis]
           gi|223534734|gb|EEF36426.1| protein with unknown
           function [Ricinus communis]
          Length = 1490

 Score = 61.2 bits (147), Expect(2) = 2e-14
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = -2

Query: 298 AGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYS 197
           AGLGD+TGSIL GTGSD+G  DRSMVRNLFG+YS
Sbjct: 730 AGLGDVTGSILYGTGSDLGTSDRSMVRNLFGAYS 763



 Score = 46.6 bits (109), Expect(2) = 2e-14
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -3

Query: 192 NLESIDGGSSRKRQRLPHSSAELAAMEVRLISS*CIDLLYITS 64
           N+ES  GG+S KRQRLP+S AELAAMEVR +   CI  L + S
Sbjct: 765 NVESSAGGTSNKRQRLPYSPAELAAMEVRAME--CIRQLLLRS 805


>ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1485

 Score = 58.5 bits (140), Expect(2) = 2e-13
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -2

Query: 298 AGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYS 197
           AGLGDL+GSIL G GS +GAGDR+MVRNLFG+YS
Sbjct: 729 AGLGDLSGSILYGNGSALGAGDRNMVRNLFGAYS 762



 Score = 45.8 bits (107), Expect(2) = 2e-13
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = -3

Query: 195 RNLESIDGGSSRKRQRLPHSSAELAAMEVRLISS*CIDLLYITS 64
           RN+ES  G +S KRQRLP+S AELAAMEVR +   CI  L + S
Sbjct: 763 RNMESNGGRTSNKRQRLPYSPAELAAMEVRAME--CIRQLLLRS 804


>ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula]
           gi|355524966|gb|AET05420.1| Nuclear pore complex protein
           Nup155 [Medicago truncatula]
          Length = 1484

 Score = 55.5 bits (132), Expect(2) = 8e-13
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -2

Query: 298 AGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYS 197
           AGLGD++GSIL G GS +GAGDRSMVR LFG+YS
Sbjct: 729 AGLGDVSGSILYGGGSALGAGDRSMVRTLFGAYS 762



 Score = 46.6 bits (109), Expect(2) = 8e-13
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = -3

Query: 195 RNLESIDGGSSRKRQRLPHSSAELAAMEVRLISS*CIDLLYITS 64
           +N+ES  GG++ KRQRLP+S AELAAMEVR +   CI  L + S
Sbjct: 763 KNMESNGGGAANKRQRLPYSPAELAAMEVRAME--CIRQLLLRS 804


>ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1486

 Score = 57.0 bits (136), Expect(2) = 2e-12
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -2

Query: 298 AGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYS 197
           AGLGDL+GSIL G GS +G GDR+MVRNLFG+YS
Sbjct: 729 AGLGDLSGSILYGNGSALGVGDRNMVRNLFGAYS 762



 Score = 43.9 bits (102), Expect(2) = 2e-12
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = -3

Query: 195 RNLESIDGGSSRKRQRLPHSSAELAAMEVRLISS*CIDLLYITS 64
           RN+ES  G ++ KRQRLP+S AELAAMEVR +   CI  L + S
Sbjct: 763 RNMESNGGITTNKRQRLPYSPAELAAMEVRAME--CIRQLLLRS 804


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